mRNA_P-wetherbeei_contig14397.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14397.2.1
Unique NamemRNA_P-wetherbeei_contig14397.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14397.2.1 vs. uniprot
Match: D8LGN6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGN6_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 1.930e-98
Identity = 169/400 (42.25%), Postives = 239/400 (59.75%), Query Frame = 1
Query:    4 FSGDGRRLIAATAEPENAIIMWDWDKERVLCVTTSGVHARTTRVSFCPVSPDHFTTSGPAHLRVWTLAAETAHKQQ-LAPPGREQDNFCDHAWLAPAAATTNRHPARLVAITDGES----------LRDEGGACILIFDHVGGKAVLELRQALAAALPGSARLDAVSATPRGFVAAGGGVHGHLAVYEHMDDRAHPYMLIKSFSTRGDSLLGLAVSPGGEALCCYARSNRLLLFQLGAVDIMNGGDGGMNXXXXXXXXXXSGMNGNXXXXXFEPVVGGGTHAGAVLSLDACTQRPVVATLGADRVIRVWNYLRW-------RCDVVVELRGEDPSCLGLHPAGLQLAVGLKDRVRLFHVLMDALRTWRDLPVKGARAVAYARGGHLLAVAAGFAISLFET 1149
            FSGD + L+ A  EPE+ I++W+W+KE+V   T     +  TRV+F P     FTTSG  HLR+W  +++   K   + P  +EQ NF DHAW+   A      P R+VAITDG+             ++ G+ IL+FD       LEL+Q L A LP +ARL+ +    +GF+ AGGG++G+L VYE+M+D   PYM IKSF+  G  L  L ++ G E +  Y+R+N +L F LG +D++   D G+N                     F P++ GG H   V++LD C  +P+V T+G DRV+RVW+YL+W       +C+VV E R EDP+C  LHP G Q+AVG KDRVR++ +LM+ LR  RD+P K  RAVAYA GGHLLAVA+GF++ ++ +
Sbjct:  160 FSGDSKWLVTAATEPESNIVVWNWEKEKV-DKTAQNSGSSATRVAFHPGDHGFFTTSGAQHLRLWYTSSDNVLKAHGILPQAKEQGNFTDHAWIPGTAG----QPTRMVAITDGDDHGASXXXXXXXMNQRGSLILVFDATEASPFLELKQTLHAQLPHTARLETLMPFSKGFIVAGGGINGYLGVYENMEDHRDPYMWIKSFTANGSVLESLTLNRGSEVMYVYSRTNEILTFNLGNMDVL---DEGINH--------------------FHPLLQGGNHTSPVVALDVCLTKPIVVTVGEDRVLRVWSYLKWGPNTQKWKCEVVYEFRNEDPNCASLHPTGFQVAVGFKDRVRIYSLLMEGLRVLRDIPQKNCRAVAYANGGHLLAVASGFSLMVYTS 531          
BLAST of mRNA_P-wetherbeei_contig14397.2.1 vs. uniprot
Match: A0A835ZDN2_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN2_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.470e-87
Identity = 172/425 (40.47%), Postives = 228/425 (53.65%), Query Frame = 1
Query:    1 AFSGDGRRLIAATAEPENAIIMWDWDKERVLCVTTSGVHA----RTTRVSFCPVSPDHFTTSGPAHLRVWTLAAETAHK-QQLAPPGREQDNFCDHAWLAPAAATTNRHP---------------------------ARLVAITDGESLRDEGGACILIFDHVGGKAVLELRQALAAALPGSARLDAVSATPRGFVAAGGGV-HGHLAVYEHMDDRAHPYMLIKSFSTRGDSLLGLAVSPGGEALCCYARSNRLLLFQLGAVDIMNGGDGGMNXXXXXXXXXXSGMNGNXXXXXFEPVVGGGTHAGAVLSLDACTQRPVVATLGADRVIRVWNYLRWRCDVVVELRGEDPSCLGLHPAGLQLAVGLK-----------DRVRLFHVLMDALRTWRDLPVKGARAVAYARGGHLLAVAAGFAISLF 1143
            AF+   + L A   E E  +++W W+K +V+    +G  A    R TR+ F P      TTSGP HLR+W    + A K   L P GRE D   DH WL  ++                                  AR+VA TDGE +RD  GA IL+FD +     LELRQ + A LPGS+RL+ V    +GF+AAGGGV  G L+VYE   DR  PY L+++  TR  +L  LAVS GGE    YAR+ RLL   L +VD ++                            F  ++ GGTH GAV++ D    +P++AT+GADR +RVWNYLRWRCD+V ELR EDP+C+ LHP+G  +AVG K           +R+RL+HVL   LR  R+L  K  RA+ ++RGGHLLA AAGF++ +F
Sbjct:  155 AFNTSSKLLAAVGGEAEAQLVVWAWEKGKVVRAGGAGGGAHHGPRVTRLHFSPDDDARLTTSGPQHLRIWYTMPDGAQKVHSLLPSGREFDALADHTWLRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARMVAATDGEGVRDTRGASILVFDAIAAHPFLELRQMIQAHLPGSSRLETVVPCAKGFLAAGGGVASGFLSVYEATADRRAPYALVRALPTRAGALTALAVSRGGETAVAYARAGRLLALPLASVDALD-----------------------ESADHFVSLLPGGTHCGAVVAADVAVHKPLLATVGADRRLRVWNYLRWRCDIVHELRVEDPACVALHPSGYLVAVGFKASDDARRRRLPERIRLYHVLAAGLRPDRELSAKNVRALRFSRGGHLLAAAAGFSVCVF 556          
BLAST of mRNA_P-wetherbeei_contig14397.2.1 vs. uniprot
Match: A0A7S2QV56_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QV56_9STRA)

HSP 1 Score: 277 bits (708), Expect = 1.180e-78
Identity = 156/486 (32.10%), Postives = 259/486 (53.29%), Query Frame = 1
Query:    4 FSGDGRRLIAATAEPENAIIMWDW-DKERVLCVTTSGVHARTTRVSFCPVSPD---HFTTSGPAHLRVWTLAAETAHKQQLAPPGREQDNFCDHAWLAPAAATTNRHPARLVAITDGESLRDEGG--ACILIFDHVGGKAVLELRQALAAALPGSARLDAVSATPRGFVAAGGGVHGHLAVYEHMDDRAHPYMLIKSFSTRGDSLLGLAVSPGGEALCCYARSNRLLLFQLGAVDIMNGGDGGMNXXXXXXXXXXSGMNGNXXXXXFEPVVGGGTHAGAVLSLDACTQRPVVATLGADRVIRVWNYLRWRCDVVVELRGEDPSCLGLHPAGLQLAVGLKDRVRLFHVLMDALRTWRDLPVKGARAVAYARGGHLLAVAAGFAISLFET------GAMTCLQSLCGHVGPVAALQWGDGDARLFSTGLDGNVFAWDLASG---MRTDELSPLGRSAPYHA-IAIAAGRVGEPSRAVVCGLDGVLCEL 1413
            FSGD + LI  +  P   +I+WDW    + +    S      TRVS    +P       T+GP H+RVW ++ +   K Q+    +E DNF DH WL     T +    R+ A+T+G +  +       IL+   +    ++E R+ +   L G+ ++  ++ + RGF+   GG +G  +VYE  DDR  PYM IK F    +S + ++ +   E    Y+++ RLL F LG+VD+++  +                         F  V+ GGTH GA++    C Q+P++AT+G D+ +R+WNYL+W C++  +   +DP+C+ +HP+G+Q+ VGL++R+R+++V+++ L+ +R+LP+KG R + Y+ GGH+ A   G  IS++ T          CL +  GH+  V+ + W   D  ++STGLDGNV+ W+L       R DE++ L R+  Y   +A  A  + + +R  VCG +    EL
Sbjct:  142 FSGDSKMLITVSDGPNRNMIVWDWASPTKPMKYQISLGQTAVTRVSSPLNNPPGVLQLITTGPYHIRVWNISGDNPIKSQVL--YKEHDNFVDHCWL-----TLDGGIQRMAAVTEGTTAPNSNQRFGSILLCQSIDEDKLIEYRRTMTVVLQGNTQIRTIAKSSRGFIV--GGTNGFFSVYEKTDDRKDPYMHIKYFYCGRESFMSISANHNDEHAVAYSKTGRLLSFPLGSVDMIDESEA---------------------EKRFIDVIPGGTHEGAIIDSSLCAQKPLLATVGGDKSVRLWNYLKWECELTHKFNSDDPTCVSMHPSGIQILVGLRERIRMYNVMVNELKQFRELPLKGCRQLEYSNGGHMFAACVGQMISVYSTYKFNISTGFECLFNYNGHISNVSKVLWSPNDTFMYSTGLDGNVYGWNLQGNEVTARYDEVNILNRACSYTGMVAEFAEGMSKINRIAVCGSENYFLEL 597          
BLAST of mRNA_P-wetherbeei_contig14397.2.1 vs. uniprot
Match: A0A6G0WWN4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWN4_9STRA)

HSP 1 Score: 232 bits (592), Expect = 3.310e-63
Identity = 147/472 (31.14%), Postives = 228/472 (48.31%), Query Frame = 1
Query:    1 AFSGDGRRLIAATAEPENAIIMWDWDKERVLCVTTSGVHARTTRVSFCPVSPDHFTTSGPAHLRVWTLAAE-TAHKQQLAPPGREQDNFCDHAWLAPAAATTNRHPARLVAITDGESLRDEGGACILIFDHVGGKAVLELRQALAAALPGSARLDAVSATPRGFVAAGGGVHGHLAVYEHMDDRAHPYMLIKSFSTRGDSLLGLAVSPGGEALCCYARSNRLLLFQLGAVDIMNGGDGGMNXXXXXXXXXXSGMNGNXXXXXFEPVVGGGTHAGAVLSLDACTQRPVVATLGADRVIRVWNYLRWRCDVVVELRGEDPSCLGLHPAGLQLAVGLKDRVRLFHVLMDALRTWRDLPVKGARAVAYARGGHLLAVAAGFAISLFETGAMTCLQSLCGHVGPVAALQWGDGDARLFSTGLDGNVFAWDLASGMRTDELSPLGRSAPYHAIAIAAGRVGEPSRAVVCGLDGVLCEL 1413
            AFS D R L      P   I  W W   ++  V  +   +R TR+  CP + +  T SGP  LR WTL +        L P  REQ++F DH W+     T +     L+     E  R E     LI      +  + L          S +++ ++A+ +GFV AG    G   V+E  DD   P++LI++ S    ++  +A+SP  E +  Y  S RL+   +GA+D++  G                          F  V+  GTH G++L+ D C Q+P+V T GAD+ IR WNYL    +VV +L  E+   + LHPAG Q+A+  K+RVRL+++L D LR  R++ +K A  + ++ GGHL A  AG  IS++ T     + +  GH+  + +L+W   D  L+S G DG ++ W+  +G R D++  + +   + +  I +     P    V G DG L E+
Sbjct:  134 AFSADTRCLATLEDAPTYRISFWKWGTAKL--VAHAACPSRGTRIRICPSNANLITISGPMVLRTWTLTSSGDLRMANLIPQIREQEHFVDHVWVRDYLVTVSEL-GTLLTFRCTEDARVE-----LIHSTRLNQMSVNLA---------SGKVETIAASTKGFVLAG--TEGIFGVFEFSDDPKDPFILIRALSAGEMTIESVAISPNCENVVAYTSSQRLVTLSMGAIDVVQDGHA-----------------------DFHDVIPNGTHCGSILTFDLCLQKPIVVTCGADKTIRSWNYLLSTYEVVAQL-SEELLTMSLHPAGYQIAISFKERVRLYNILQDGLRVLREISMKAANVLQFSHGGHLFACGAGLNISIYRTYTCDLVHTFSGHINAIQSLRWSTDDTYLYSAGNDGALYCWNTHTGNRCDDMQLVVKHCKFTSTIIDSAN---PKCVAVSGSDGKLREI 559          
BLAST of mRNA_P-wetherbeei_contig14397.2.1 vs. uniprot
Match: A0A024U245_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U245_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.550e-62
Identity = 146/474 (30.80%), Postives = 226/474 (47.68%), Query Frame = 1
Query:    1 AFSGDGRRLIAATAEPENAIIMWDWDKERVLCVTTSGVHARTTRVSFCPVSPDHFTTSGPAHLRVWTLAAE-TAHKQQLAPPGREQDNFCDHAWLAPAAATTNRHPARLV--AITDGESLRDEGGACILIFDHVGGKAVLELRQALAAALPGSARLDAVSATPRGFVAAGGGVHGHLAVYEHMDDRAHPYMLIKSFSTRGDSLLGLAVSPGGEALCCYARSNRLLLFQLGAVDIMNGGDGGMNXXXXXXXXXXSGMNGNXXXXXFEPVVGGGTHAGAVLSLDACTQRPVVATLGADRVIRVWNYLRWRCDVVVELRGEDPSCLGLHPAGLQLAVGLKDRVRLFHVLMDALRTWRDLPVKGARAVAYARGGHLLAVAAGFAISLFETGAMTCLQSLCGHVGPVAALQWGDGDARLFSTGLDGNVFAWDLASGMRTDELSPLGRSAPYHAIAIAAGRVGEPSRAVVCGLDGVLCEL 1413
            AFS D + +      P   I  W W   ++  V  +   +R TR+  CPV+ +  T SGP  LR WTL +        L P  REQ++F DH W+     T +     L   A  DG  L         +     G+   +L            +++ ++A+ +GFV AG    G   V+E  DD   P++LI + S    +   +A+SP  E +  Y  + RL+ F +G++D++                       +     F  V+  GTH G VL+ D C Q+P+V T GAD+ IR WNY     +VV +L  E+PS L LHPAG Q+A+  K+RVRL+++L D LR  R++ +K A  + ++ GGHLLA  AG  + +F T     + +  GH+  +  L+W   D+ L+S G DG ++ W+  +G R D++  + +   + +  I A          V G DG L E+
Sbjct:  153 AFSADNKTIATLEDAPSYRIGYWKWSTSKL--VAHAPCPSRGTRIRICPVNSNFVTISGPMVLRAWTLTSTGDLRMTNLIPQIREQEHFVDHVWIKEYLVTVSELGTLLTFRAADDGVEL---------VHSTKLGQISPQLTLG---------KIETITASTKGFVLAGAA--GSFGVFEFSDDPKDPFILIHALSAGDMTFESVAISPNCETVVAYTTNQRLVSFAMGSIDVVQ----------------------DNTHAEFCDVIPSGTHCGGVLTFDVCLQKPIVVTCGADKTIRSWNYHLSAYEVVAQL-SEEPSTLSLHPAGFQVAIAFKERVRLYNILQDGLRVLREISIKAANVLQFSHGGHLLACGAGLNMYIFRTHTCDLVHTFTGHINVIQCLRWTVDDSILYSAGNDGAIYCWNTHTGNRCDDMQLVVKQTKFTSAVIDADNA---KYVAVGGSDGKLREI 578          
BLAST of mRNA_P-wetherbeei_contig14397.2.1 vs. uniprot
Match: A0A1V9ZPF7_9STRA (WD domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZPF7_9STRA)

HSP 1 Score: 226 bits (575), Expect = 5.900e-61
Identity = 144/473 (30.44%), Postives = 217/473 (45.88%), Query Frame = 1
Query:    1 AFSGDGRRLIAATAEPENAIIMWDWDKERVLCVTTSGVHARTTRVSFCPVSPDHFTTSGPAHLRVWTLAAETAHKQQLAPPGREQDNFCDHAWLAPAAATTNRHPARLV--AITDGESLRDEGGACILIFDHVGGKAVLELRQALAAALPGSARLDAVSATPRGFVAAGGGVHGHLAVYEHMDDRAHPYMLIKSFSTRGDSLLGLAVSPGGEALCCYARSNRLLLFQLGAVDIMNGGDGGMNXXXXXXXXXXSGMNGNXXXXXFEPVVGGGTHAGAVLSLDACTQRPVVATLGADRVIRVWNYLRWRCDVVVELRGEDPSCLGLHPAGLQLAVGLKDRVRLFHVLMDALRTWRDLPVKGARAVAYARGGHLLAVAAGFAISLFETGAMTCLQSLCGHVGPVAALQWGDGDARLFSTGLDGNVFAWDLASGMRTDELSPLGRSAPYHAIAIAAGRVGEPSRAVVCGLDGVLCEL 1413
            AFS D + ++     P   I  W W   ++  V T+   +R TRV   P + +  T SGP  LR WTL+A+      L P  REQ++F DH W+     T +     L+     DG  L        L      GK                  +  + A+ +GFV AG    G  +V+E  DD   P++LI+S S    S+  +A+SP  E    Y  S RL+ F +G++D++                       N            G+HAGA+L++D C Q+ ++ T GAD+ IR WNY     +VV  L  E+P+ L LHPAG QL V  K+RVR+++++ D LR  RD  +K    + ++ GGH  A  AG  + ++ T       +L GH+  +  L WG  D  L+S G DG ++ W+  +G R D++  + +     A  + A     P    + G DG L E+
Sbjct:  132 AFSADNKTIVTLEDAPTYRIAYWKWSTAKL--VATATCPSRGTRVRISPFNANFLTVSGPMVLRAWTLSADL-RMSNLVPQIREQEHFVDHVWVRQYLVTVSEIGTLLIFQGSDDGVELVHSTKLSALQSTFQVGK------------------VQTICASAKGFVLAG--TSGLFSVFEFSDDPKDPFILIRSMSAGDFSIESVAISPNCENAVAYTDSQRLVTFAMGSIDVVQDSTTEFRDLIP-----------NARCSEGRLAHSAGSHAGAILAIDVCLQKSLIVTCGADKSIRSWNYHLGAYEVVASLT-EEPTTLSLHPAGFQLVVAFKERVRIYNLIQDGLRVLRDFSMKACSVIRFSNGGHQFACGAGLTVYIYRTYTCDLAYTLTGHINTIQCLAWGADDLLLYSAGNDGTIYCWNTTNGNRFDDMQLVVKHCKITATVVDAAT---PKLVAIAGSDGHLREI 566          
BLAST of mRNA_P-wetherbeei_contig14397.2.1 vs. uniprot
Match: A0A067C6E5_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C6E5_SAPPC)

HSP 1 Score: 217 bits (553), Expect = 4.640e-58
Identity = 138/474 (29.11%), Postives = 217/474 (45.78%), Query Frame = 1
Query:    1 AFSGDGRRLIAATAEPENAIIMWDWDKERVLCVTTSGVHARTTRVSFCPVSPDHFTTSGPAHLRVWTLA-AETAHKQQLAPPGREQDNFCDHAWLAPAAATTNRHPARLV--AITDGESLRDEGGACILIFDHVGGKAVLELRQALAAALPGSARLDAVSATPRGFVAAGGGVHGHLAVYEHMDDRAHPYMLIKSFSTRGDSLLGLAVSPGGEALCCYARSNRLLLFQLGAVDIMNGGDGGMNXXXXXXXXXXSGMNGNXXXXXFEPVVGGGTHAGAVLSLDACTQRPVVATLGADRVIRVWNYLRWRCDVVVELRGEDPSCLGLHPAGLQLAVGLKDRVRLFHVLMDALRTWRDLPVKGARAVAYARGGHLLAVAAGFAISLFETGAMTCLQSLCGHVGPVAALQWGDGDARLFSTGLDGNVFAWDLASGMRTDELSPLGRSAPYHAIAIAAGRVGEPSRAVVCGLDGVLCEL 1413
            AFS D + L+     P + I  W W   ++  V  +   +R TR+   P +P+  T SGP  LR WTL  A       L P  REQ++F DH W+     T +     L+     DG  L        L      GK                  +  +SA+ +GFV AG    G  +V+E  DD   P++LI+S S    ++  +A+SP  E+   Y  + RL+ F +G++D++                             F  ++  G HAGA+L++D C Q+P++ + G D+ +R WNY     +VV  L  E+P+ L LHPAG Q+ V  K+RVR+++++ + LR  RD  +K    + +A GGH+ A  AG  + ++ T       +L GH+  +  L W   D  L+S G DG  + W+  +G R D++  + +     A  +       P    + G DG L E+
Sbjct:  140 AFSADNKCLVTLEDAPTHRIAYWKWATSKL--VAHAPCPSRGTRIRISPFNPNFVTISGPMVLRSWTLTTAADLRMSSLVPQIREQEHFVDHVWVRQYLVTISEVGTLLIFQGADDGVELVHSTKLSALQATFQVGK------------------VQTISASAKGFVLAG--TSGLFSVFEFSDDPKDPFILIRSMSAGDFAIESVAISPNCESAVAYTDTQRLVTFAMGSIDVVQ-----------------------DSTTEFRDLIPNGMHAGAILAVDVCLQKPLLVSCGVDKSLRSWNYHLGSYEVVAMLT-EEPTTLSLHPAGFQVVVAFKERVRIYNLIQEGLRVLRDFSMKACSVLRFANGGHMFACGAGLTVYIYHTYTCDLAYTLTGHINTIQCLAWSADDLLLYSAGNDGTTYCWNATNGNRCDDMQLVIKHCKITATVVDHLN---PKLVAIAGSDGHLREI 564          
BLAST of mRNA_P-wetherbeei_contig14397.2.1 vs. uniprot
Match: A0A5D6Y514_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y514_9STRA)

HSP 1 Score: 214 bits (546), Expect = 4.260e-57
Identity = 140/470 (29.79%), Postives = 223/470 (47.45%), Query Frame = 1
Query:    4 FSGDGRRLIAATAEPENAIIMWDWDKERVLCVTTSGVHARTTRVSFCPVSPDHFTTSGPAHLRVWTLAAETAHKQQLAPPGREQDNFCDHAWLAPAAATTNRHPARLVAITDGESLRDEGGACILIFDHVGGKAVLELRQALAAALPGSARLDAVSATPRGFVAAGGGVHGHLAVYEHMDDRAHPYMLIKSFSTRGDSLLGLAVSPGGEALCCYARSNRLLLFQLGAVDIMNGGDGGMNXXXXXXXXXXSGMNGNXXXXXFEPVVGGGTHAGAVLSLDACTQRPVVATLGADRVIRVWNYLRWRCDVVVELRGEDPSCLGLHPAGLQLAVGLKDRVRLFHVLMDALRTWRDLPVKGARAVAYARGGHLLAVAAGFAISLFETGAMTCLQSLCGHVGPVAALQWGDGDARLFSTGLDGNVFAWDLASGMRTDELSPLGRSAPYHAIAIAAGRVGEPSRAVVCGLDGVLCEL 1413
            FS   + L      P + +  W     ++L   +    +R  R+   P +  + + SGP  L+ W             P  REQD+F DH W       T  +   ++A+++           +L F      A ++L  +         R++ ++A  +GFV   GG  G  ++YE  DD   P+ L++S S    +   +AVSP  E +    +S  LL F + ++D +                             +      G   GAV+ +D C QRP+VA+ GAD+ +RVWNY   + +++ +   ++P  LGLHP G Q+AV  K+RVR+F++L+++LR  R+LPVK  RA+ YARGGHLLA AAG  + +F +     + +  GH+G V  L W   DA L+S   DG V+ W +A+G R+DE+  + +   Y A+ +      +P   V  G DG + EL
Sbjct:  185 FSACNKFLALLEDAPTHNVTYWKVSNAKLLA--SCKCPSRGARIHINPSNASYISVSGPTVLKYWLWTNSEFKIGNFLPQLREQDHFVDHVW-------TKEY---MIALSEK--------GLLLCFRASADFASVDLVHSYRCHHLSFVRMECITAHAKGFVL--GGSAGFFSIYETSDDPKDPFSLVRSVSVGDVAFESVAVSPSVETVVVCTKSQELLTFAMSSIDTVQ-----------------------EDRVDYREFARHGYQVGAVVQIDICVQRPIVASCGADKSVRVWNYELKQYELLHQC-SDEPLALGLHPCGFQVAVAFKERVRVFNILVESLRQVRELPVKSCRAIRYARGGHLLACAAGLTVLVFRSYTFDLVHTFAGHIGAVRCLAWSKDDAFLYSAAHDGAVYRWSIATGGRSDEMQHVVKQCQYTALVVDEK---DPRVVVAAGSDGKVREL 605          
BLAST of mRNA_P-wetherbeei_contig14397.2.1 vs. uniprot
Match: A0A1V9YWA4_9STRA (WD domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YWA4_9STRA)

HSP 1 Score: 214 bits (544), Expect = 7.410e-57
Identity = 129/435 (29.66%), Postives = 207/435 (47.59%), Query Frame = 1
Query:    1 AFSGDGRRLIAATAEPENAIIMWDWDKERVLCVTTSGVHARTTRVSFCPVSPDHFTTSGPAHLRVWTLAAET-AHKQQLAPPGREQDNFCDHAWLAPAAATTNRHPARLVAITDGESLRDEGGACILIFDHVGGKAVLELRQALAAALPGSARLDAVSATPRGFVAAGGGVHGHLAVYEHMDDRAHPYMLIKSFSTRGDSLLGLAVSPGGEALCCYARSNRLLLFQLGAVDIMNGGDGGMNXXXXXXXXXXSGMNGNXXXXXFEPVVGGGTHAGAVLSLDACTQRPVVATLGADRVIRVWNYLRWRCDVVVELRGEDPSCLGLHPAGLQLAVGLKDRVRLFHVLMDALRTWRDLPVKGARAVAYARGGHLLAVAAGFAISLFETGAMTCLQSLCGHVGPVAALQWGDGDARLFSTGLDGNVFAWDLASGMRTDEL 1302
            AFS D + L      P   I  W W   ++  V  +   +R TR+ F P + +  T SGP  LR W+L          L P  REQ++F DH W+     T +     L+     +   D+ G      + V    + +L+           ++  + A+ +GFV AG    G  +V+E  DD   P++LI+S +    S+  +A+SP  E    Y  + RL+ F + ++D++  G                          F  ++  G+H+G +L++D C Q+P++ T G D+ IR WNY     +VV  L  E+P+ L LHPAG QL V  K+RVR+++++ + LR  RD  +K    + ++ GGH  A  AG  +S+F T       SL GH+  + +L W   D  L+S G DG ++ W+  +G R D++
Sbjct:  133 AFSADNKCLATLEDAPTYRIAYWKWSTAKL--VAHAPCPSRGTRIRFNPFNSNFLTISGPMVLRAWSLTTTMDLRMSNLIPQIREQEHFVDHVWVRQYLVTISELGTLLIF----QGSDDKDGV-----ELVHSTKLSQLQSTFQVG-----KVQTICASSKGFVLAG--TSGLFSVFEFSDDPKDPFILIRSMAAGDFSIESVAISPNCENAVAYTDTQRLVTFSMASIDVVQDG-----------------------AAEFRDLIPNGSHSGPILTIDVCIQKPILVTCGVDKTIRSWNYNLCTYEVVASLT-EEPTTLSLHPAGFQLVVAFKERVRIYNLIQEGLRVLRDFSMKACTVIRFSHGGHQFACGAGLTVSIFRTYTCELTFSLTGHINTIQSLTWSYDDLLLYSAGNDGTIYCWNTTNGNRCDDM 525          
BLAST of mRNA_P-wetherbeei_contig14397.2.1 vs. uniprot
Match: A0A2D4CCP3_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCP3_PYTIN)

HSP 1 Score: 206 bits (523), Expect = 4.400e-54
Identity = 134/470 (28.51%), Postives = 223/470 (47.45%), Query Frame = 1
Query:    4 FSGDGRRLIAATAEPENAIIMWDWDKERVLCVTTSGVHARTTRVSFCPVSPDHFTTSGPAHLRVWTLAAETAHKQQLAPPGREQDNFCDHAWLAPAAATTNRHPARLVAITDGESLRDEGGACILIFDHVGGKAVLELRQALAAALPGSARLDAVSATPRGFVAAGGGVHGHLAVYEHMDDRAHPYMLIKSFSTRGDSLLGLAVSPGGEALCCYARSNRLLLFQLGAVDIMNGGDGGMNXXXXXXXXXXSGMNGNXXXXXFEPVVGGGTHAGAVLSLDACTQRPVVATLGADRVIRVWNYLRWRCDVVVELRGEDPSCLGLHPAGLQLAVGLKDRVRLFHVLMDALRTWRDLPVKGARAVAYARGGHLLAVAAGFAISLFETGAMTCLQSLCGHVGPVAALQWGDGDARLFSTGLDGNVFAWDLASGMRTDELSPLGRSAPYHAIAIAAGRVGEPSRAVVCGLDGVLCEL 1413
            FS D + ++     P +++  W  +  +++  + S   +R TRV   P + ++ T SGP   + W           L P  R+Q++F DH WL             +V ++       E G  +     + G AV +L  A     P   RL+ ++   +GFV   GG  G  +++E  DD   P+  +++ +    +   +AVSP  E +    +S  LL F +  +D +                             +  ++   +  G VL L+ C  RP++AT G D+ +RVWNY     +V      ++P  L LHP GLQ+ V  K+R+R F +L D+LR  R+L VK  RA+++A+GGHL A A+G  ++++ T     + +  GH+G V ++ W   D  L+STG DG ++ W++ SG R D++  L +   Y ++ +A  R  +P  A V G DG + EL
Sbjct:   46 FSADNKYIVLLEDAPTHSVAYWKVNTAKLIASSKSP--SRGTRVFISPSNSNYITVSGPMIFKYWLWTNNDFKIGNLLPQARDQEHFVDHLWLK----------EYMVGLS-------ERGMILSFRASLDGTAV-DLVHASRCHHPSYVRLECLAGHSKGFVV--GGSAGFFSLFEFSDDPKDPFAFVRTVAVGDAAFDCIAVSPSAEMVVASTKSQELLSFAMSTIDTVQ-----------------------EDRIEYHELLQHVSQVGPVLQLELCLHRPIIATCGMDKSVRVWNYELHHYEVFHGC-ADEPIALSLHPTGLQMIVSFKERIRYFQILQDSLRQVRELSVKACRALSFAKGGHLFACASGLTVTVYRTNTCDLMHTFAGHIGAVKSVAWTRDDFFLYSTGHDGTLYRWNIVSGSRCDDVQHLVKQCQYASV-VADDR--DPKIAFVGGSDGRVREL 466          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14397.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGN6_ECTSI1.930e-9842.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDN2_9STRA1.470e-8740.47WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2QV56_9STRA1.180e-7832.10Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A6G0WWN4_9STRA3.310e-6331.14Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A024U245_9STRA1.550e-6230.80Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A1V9ZPF7_9STRA5.900e-6130.44WD domain-containing protein n=1 Tax=Achlya hypogy... [more]
A0A067C6E5_SAPPC4.640e-5829.11Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A5D6Y514_9STRA4.260e-5729.79Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A1V9YWA4_9STRA7.410e-5729.66WD domain-containing protein n=1 Tax=Thraustotheca... [more]
A0A2D4CCP3_PYTIN4.400e-5428.51Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14397contigP-wetherbeei_contig14397:32..1444 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LGN6
PFAMsWD40
Model size1413
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.17e-99
EggNOG OGs29BYW@1|root,2RJ2B@2759|Eukaryota
DescriptionWD40 repeats
Cds size1413
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186020.3808565-CDS-P-wetherbeei_contig14397:31..14441683186020.3808565-CDS-P-wetherbeei_contig14397:31..1444Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14397 32..1444 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14397.2.1prot_P-wetherbeei_contig14397.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14397 32..1444 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14397.2.1

>prot_P-wetherbeei_contig14397.2.1 ID=prot_P-wetherbeei_contig14397.2.1|Name=mRNA_P-wetherbeei_contig14397.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=471bp
AFSGDGRRLIAATAEPENAIIMWDWDKERVLCVTTSGVHARTTRVSFCPV
SPDHFTTSGPAHLRVWTLAAETAHKQQLAPPGREQDNFCDHAWLAPAAAT
TNRHPARLVAITDGESLRDEGGACILIFDHVGGKAVLELRQALAAALPGS
ARLDAVSATPRGFVAAGGGVHGHLAVYEHMDDRAHPYMLIKSFSTRGDSL
LGLAVSPGGEALCCYARSNRLLLFQLGAVDIMNGGDGGMNGVMNGGMNGG
SGMNGNGGEGVFEPVVGGGTHAGAVLSLDACTQRPVVATLGADRVIRVWN
YLRWRCDVVVELRGEDPSCLGLHPAGLQLAVGLKDRVRLFHVLMDALRTW
RDLPVKGARAVAYARGGHLLAVAAGFAISLFETGAMTCLQSLCGHVGPVA
ALQWGDGDARLFSTGLDGNVFAWDLASGMRTDELSPLGRSAPYHAIAIAA
GRVGEPSRAVVCGLDGVLCEL
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mRNA from alignment at P-wetherbeei_contig14397:32..1444+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14397.2.1 ID=mRNA_P-wetherbeei_contig14397.2.1|Name=mRNA_P-wetherbeei_contig14397.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1413bp|location=Sequence derived from alignment at P-wetherbeei_contig14397:32..1444+ (Phaeothamnion wetherbeei SAG_119_79)
GCTTTCAGCGGCGATGGCCGGCGCCTGATCGCCGCCACCGCCGAGCCCGA AAACGCCATCATCATGTGGGACTGGGACAAGGAGCGCGTGCTCTGTGTGA CGACCAGCGGCGTCCATGCACGTACCACCCGCGTCAGCTTCTGCCCCGTC TCTCCTGACCACTTCACGACATCAGGCCCCGCCCACCTTCGTGTCTGGAC GCTGGCCGCCGAAACCGCGCACAAGCAGCAACTAGCACCGCCGGGCCGCG AACAGGACAATTTTTGCGACCACGCCTGGCTGGCGCCCGCCGCTGCCACC ACTAACCGCCACCCGGCGCGGCTTGTCGCCATCACTGACGGCGAGAGCCT GCGAGACGAGGGCGGAGCCTGCATTCTCATCTTCGATCACGTCGGCGGCA AGGCCGTGTTGGAGCTGCGGCAGGCCCTAGCGGCGGCGCTTCCTGGCTCC GCTCGCCTGGATGCGGTGTCGGCAACACCACGCGGCTTCGTCGCCGCCGG TGGCGGTGTCCATGGCCATTTGGCGGTCTATGAGCACATGGACGACCGGG CGCACCCGTACATGCTCATCAAATCGTTCTCGACCCGGGGGGATTCCCTC TTGGGGTTGGCGGTCAGCCCGGGCGGGGAAGCGCTCTGCTGCTACGCCCG CAGCAACCGCCTGCTGCTGTTCCAGCTCGGCGCGGTCGACATCATGAACG GCGGCGACGGCGGAATGAATGGCGTAATGAACGGCGGAATGAACGGCGGC AGCGGAATGAACGGAAATGGCGGGGAGGGGGTGTTTGAACCGGTTGTCGG CGGCGGCACGCACGCCGGCGCCGTCCTGTCGCTGGACGCCTGCACGCAGC GGCCGGTCGTGGCGACGCTCGGTGCCGACCGCGTCATCCGCGTCTGGAAT TACTTACGCTGGCGCTGCGACGTCGTAGTCGAGCTGCGCGGCGAGGACCC GTCCTGCCTGGGTCTGCACCCGGCCGGCCTCCAGCTGGCCGTCGGACTGA AGGACCGCGTGCGTCTCTTCCACGTCCTGATGGACGCGCTGCGGACGTGG CGCGACCTGCCCGTCAAGGGCGCGCGCGCCGTGGCCTACGCGCGGGGCGG CCATCTGCTGGCAGTCGCTGCCGGCTTTGCAATTTCTTTGTTTGAAACGG GCGCCATGACCTGCCTGCAGAGCCTCTGCGGGCACGTAGGTCCTGTCGCC GCCCTCCAGTGGGGCGATGGCGACGCCCGCCTCTTCTCGACGGGTCTGGA CGGCAATGTCTTCGCCTGGGACCTGGCATCGGGCATGCGGACGGACGAAC TCAGCCCGCTCGGCCGCAGCGCGCCGTACCACGCCATTGCCATCGCCGCC GGCCGCGTCGGCGAGCCGAGCCGCGCCGTCGTCTGCGGCCTCGACGGCGT TCTCTGCGAACTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14397:32..1444+

>mRNA_P-wetherbeei_contig14397.2.1 ID=mRNA_P-wetherbeei_contig14397.2.1|Name=mRNA_P-wetherbeei_contig14397.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1413bp|location=Sequence derived from alignment at P-wetherbeei_contig14397:32..1444+ (Phaeothamnion wetherbeei SAG_119_79)
GCTTTCAGCGGCGATGGCCGGCGCCTGATCGCCGCCACCGCCGAGCCCGA
AAACGCCATCATCATGTGGGACTGGGACAAGGAGCGCGTGCTCTGTGTGA
CGACCAGCGGCGTCCATGCACGTACCACCCGCGTCAGCTTCTGCCCCGTC
TCTCCTGACCACTTCACGACATCAGGCCCCGCCCACCTTCGTGTCTGGAC
GCTGGCCGCCGAAACCGCGCACAAGCAGCAACTAGCACCGCCGGGCCGCG
AACAGGACAATTTTTGCGACCACGCCTGGCTGGCGCCCGCCGCTGCCACC
ACTAACCGCCACCCGGCGCGGCTTGTCGCCATCACTGACGGCGAGAGCCT
GCGAGACGAGGGCGGAGCCTGCATTCTCATCTTCGATCACGTCGGCGGCA
AGGCCGTGTTGGAGCTGCGGCAGGCCCTAGCGGCGGCGCTTCCTGGCTCC
GCTCGCCTGGATGCGGTGTCGGCAACACCACGCGGCTTCGTCGCCGCCGG
TGGCGGTGTCCATGGCCATTTGGCGGTCTATGAGCACATGGACGACCGGG
CGCACCCGTACATGCTCATCAAATCGTTCTCGACCCGGGGGGATTCCCTC
TTGGGGTTGGCGGTCAGCCCGGGCGGGGAAGCGCTCTGCTGCTACGCCCG
CAGCAACCGCCTGCTGCTGTTCCAGCTCGGCGCGGTCGACATCATGAACG
GCGGCGACGGCGGAATGAATGGCGTAATGAACGGCGGAATGAACGGCGGC
AGCGGAATGAACGGAAATGGCGGGGAGGGGGTGTTTGAACCGGTTGTCGG
CGGCGGCACGCACGCCGGCGCCGTCCTGTCGCTGGACGCCTGCACGCAGC
GGCCGGTCGTGGCGACGCTCGGTGCCGACCGCGTCATCCGCGTCTGGAAT
TACTTACGCTGGCGCTGCGACGTCGTAGTCGAGCTGCGCGGCGAGGACCC
GTCCTGCCTGGGTCTGCACCCGGCCGGCCTCCAGCTGGCCGTCGGACTGA
AGGACCGCGTGCGTCTCTTCCACGTCCTGATGGACGCGCTGCGGACGTGG
CGCGACCTGCCCGTCAAGGGCGCGCGCGCCGTGGCCTACGCGCGGGGCGG
CCATCTGCTGGCAGTCGCTGCCGGCTTTGCAATTTCTTTGTTTGAAACGG
GCGCCATGACCTGCCTGCAGAGCCTCTGCGGGCACGTAGGTCCTGTCGCC
GCCCTCCAGTGGGGCGATGGCGACGCCCGCCTCTTCTCGACGGGTCTGGA
CGGCAATGTCTTCGCCTGGGACCTGGCATCGGGCATGCGGACGGACGAAC
TCAGCCCGCTCGGCCGCAGCGCGCCGTACCACGCCATTGCCATCGCCGCC
GGCCGCGTCGGCGAGCCGAGCCGCGCCGTCGTCTGCGGCCTCGACGGCGT
TCTCTGCGAACTC
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