mRNA_P-wetherbeei_contig14381.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14381.1.1
Unique NamemRNA_P-wetherbeei_contig14381.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14381.1.1 vs. uniprot
Match: A0A7C2UE57_9PROT ((2Fe-2S)-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UE57_9PROT)

HSP 1 Score: 278 bits (710), Expect = 4.650e-94
Identity = 126/153 (82.35%), Postives = 142/153 (92.81%), Query Frame = 1
Query:    1 MTKIELTVNGTKHSREVEDRALLVDVLRDQLQLTGTHIGCDTSQCGCCTVHVDGRAVKSCTMLAVQASGADIVTIEGMAKGGKLHPVQQAFTDCHALQCGFCTPGMIMAISAFLKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSAELM 459
            M K+E+TVNG +H+REVEDRALLV+ LRD+L LTGTH+GCDTSQCGCCTVHV+G AVKSCTMLAVQA+GAD+ TIEGMA+ G LHP+QQAFT+CH LQCGFCTPGMIMA++  LKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSAEL+
Sbjct:    1 MAKVEITVNGVRHAREVEDRALLVNFLRDELGLTGTHVGCDTSQCGCCTVHVNGLAVKSCTMLAVQANGADVRTIEGMAQNGVLHPIQQAFTECHGLQCGFCTPGMIMAVAGLLKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSAELL 153          
BLAST of mRNA_P-wetherbeei_contig14381.1.1 vs. uniprot
Match: A0A1F4DGQ3_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DGQ3_9PROT)

HSP 1 Score: 271 bits (694), Expect = 1.280e-91
Identity = 122/154 (79.22%), Postives = 141/154 (91.56%), Query Frame = 1
Query:    1 MTKIELTVNGTKHSREVEDRALLVDVLRDQLQLTGTHIGCDTSQCGCCTVHVDGRAVKSCTMLAVQASGADIVTIEGMAKGGKLHPVQQAFTDCHALQCGFCTPGMIMAISAFLKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSAELMK 462
            M  IE+TVNG K +REVEDR LLV+ +RD+L LTGTH+GCDTSQCGCCTVHV+GRAVKSCTMLA QA+GAD+VTIE MAK GKLHP+QQAFT+CH LQCGFCTPGMIMA++  LKDNP+P+DEEIYHGLEGNLCRCTGYINIVKAVK+SA+L++
Sbjct:    1 MANIEITVNGIKQAREVEDRTLLVNFIRDELGLTGTHVGCDTSQCGCCTVHVNGRAVKSCTMLAAQANGADVVTIEAMAKNGKLHPIQQAFTECHGLQCGFCTPGMIMAVAGLLKDNPNPSDEEIYHGLEGNLCRCTGYINIVKAVKKSADLLR 154          
BLAST of mRNA_P-wetherbeei_contig14381.1.1 vs. uniprot
Match: A0A7X1P168_9PROT (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1P168_9PROT)

HSP 1 Score: 270 bits (689), Expect = 6.900e-91
Identity = 122/150 (81.33%), Postives = 140/150 (93.33%), Query Frame = 1
Query:    1 MTKIELTVNGTKHSREVEDRALLVDVLRDQLQLTGTHIGCDTSQCGCCTVHVDGRAVKSCTMLAVQASGADIVTIEGMAKGGKLHPVQQAFTDCHALQCGFCTPGMIMAISAFLKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSA 450
            M KI LTVNG KH+R+VEDR LLV++LRD+L LTGTHIGCDT+QCGCCT+H++GRAVKSCT+LA QA+GA+IVTIEG+AK G+LHPVQQAFTDCHALQCGFCTPGMIMA++  L+DNPHPTDEEIYHGLEGNLCRCTGYINIVKAVK+ A
Sbjct:    1 MAKIRLTVNGVKHTRDVEDRTLLVNLLRDELGLTGTHIGCDTTQCGCCTIHMNGRAVKSCTVLAAQANGAEIVTIEGLAKDGQLHPVQQAFTDCHALQCGFCTPGMIMAVAGLLQDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKQVA 150          
BLAST of mRNA_P-wetherbeei_contig14381.1.1 vs. uniprot
Match: A0A1F4D5X8_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4D5X8_9PROT)

HSP 1 Score: 268 bits (685), Expect = 3.110e-90
Identity = 121/154 (78.57%), Postives = 139/154 (90.26%), Query Frame = 1
Query:    1 MTKIELTVNGTKHSREVEDRALLVDVLRDQLQLTGTHIGCDTSQCGCCTVHVDGRAVKSCTMLAVQASGADIVTIEGMAKGGKLHPVQQAFTDCHALQCGFCTPGMIMAISAFLKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSAELMK 462
            M ++E+TVNG KH+REVEDR LL + LRD+L LTGTHIGCDTSQCGCCTV V+GRAVKSC+MLA QA GAD++TIE MAK G LHP+QQAFT+CH LQCGFCTPGMIMA++  LKDNP+PT+EEIYHGLEGNLCRCTGYINIVKAVKRSAEL++
Sbjct:    1 MARVEITVNGAKHAREVEDRTLLANFLRDELGLTGTHIGCDTSQCGCCTVQVNGRAVKSCSMLAAQADGADVLTIEAMAKDGVLHPIQQAFTECHGLQCGFCTPGMIMAVAGLLKDNPNPTEEEIYHGLEGNLCRCTGYINIVKAVKRSAELLR 154          
BLAST of mRNA_P-wetherbeei_contig14381.1.1 vs. uniprot
Match: A0A1F3ZY09_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17 TaxID=1797484 RepID=A0A1F3ZY09_9PROT)

HSP 1 Score: 261 bits (668), Expect = 1.060e-87
Identity = 122/154 (79.22%), Postives = 134/154 (87.01%), Query Frame = 1
Query:    1 MTKIELTVNGTKHSREVEDRALLVDVLRDQLQLTGTHIGCDTSQCGCCTVHVDGRAVKSCTMLAVQASGADIVTIEGMAKGGKLHPVQQAFTDCHALQCGFCTPGMIMAISAFLKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSAELMK 462
            M +IE+TVNG K S +VEDR LL D LRD+L LTGTHIGCDTSQCGCCTVHVDG AVKSCTML  QA+GADI+TIEGMAKG KLHPVQQAFT+CHALQCGFCTPGMIMA++  LKDNP P D+EI HGLEGNLCRCTGYINI+KAVK +A  MK
Sbjct:    1 MARIEMTVNGKKVSHDVEDRTLLADFLRDELGLTGTHIGCDTSQCGCCTVHVDGVAVKSCTMLVGQANGADILTIEGMAKGDKLHPVQQAFTECHALQCGFCTPGMIMAVAGLLKDNPSPNDDEIIHGLEGNLCRCTGYINIIKAVKHAAAAMK 154          
BLAST of mRNA_P-wetherbeei_contig14381.1.1 vs. uniprot
Match: A0A1F4HD38_9PROT (Carbon monoxide dehydrogenase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4HD38_9PROT)

HSP 1 Score: 259 bits (662), Expect = 8.710e-87
Identity = 118/153 (77.12%), Postives = 137/153 (89.54%), Query Frame = 1
Query:    1 MTKIELTVNGTKHSREVEDRALLVDVLRDQLQLTGTHIGCDTSQCGCCTVHVDGRAVKSCTMLAVQASGADIVTIEGMAKGGKLHPVQQAFTDCHALQCGFCTPGMIMAISAFLKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSAELM 459
            M K+E+TVNG K S EVEDR LLVD LRD L+LTGTH+GCDTSQCGCCTVHV+GRAVKSCTML  QA+GA+++TIEG+A+G KLHPVQQAFT+CHALQCGFCTPGMIMA+   LKDNP P+D+EI HGLEGNLCRCTGYINI+KAVK++A+ M
Sbjct:    1 MAKVEMTVNGRKVSHEVEDRTLLVDFLRDTLRLTGTHVGCDTSQCGCCTVHVNGRAVKSCTMLVGQANGAEVLTIEGLAEGEKLHPVQQAFTECHALQCGFCTPGMIMAVVGLLKDNPAPSDDEIIHGLEGNLCRCTGYINIIKAVKQAAQAM 153          
BLAST of mRNA_P-wetherbeei_contig14381.1.1 vs. uniprot
Match: A0A3N5WTH6_9PROT ((2Fe-2S)-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WTH6_9PROT)

HSP 1 Score: 258 bits (658), Expect = 3.670e-86
Identity = 119/152 (78.29%), Postives = 131/152 (86.18%), Query Frame = 1
Query:    1 MTKIELTVNGTKHSREVEDRALLVDVLRDQLQLTGTHIGCDTSQCGCCTVHVDGRAVKSCTMLAVQASGADIVTIEGMAKGGKLHPVQQAFTDCHALQCGFCTPGMIMAISAFLKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSAEL 456
            M KI LTVNG K S EVEDR LL + LRD L LTGTH+GCDTSQCG CTVHVDGRAVKSCTMLA QA GAD++TIEG+AK GKLHP Q AFT+CHALQCGFCTPGMIM  +A LKD+P PTD+EI HGLEGNLCRCTGY+NI+KAVKR+AEL
Sbjct:    1 MAKITLTVNGEKRSAEVEDRTLLANFLRDTLNLTGTHVGCDTSQCGACTVHVDGRAVKSCTMLAAQADGADVLTIEGLAKNGKLHPAQAAFTECHALQCGFCTPGMIMTTAALLKDHPQPTDDEIVHGLEGNLCRCTGYLNIIKAVKRAAEL 152          
BLAST of mRNA_P-wetherbeei_contig14381.1.1 vs. uniprot
Match: A0A7C3NS16_9PROT ((2Fe-2S)-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3NS16_9PROT)

HSP 1 Score: 258 bits (658), Expect = 4.060e-86
Identity = 114/154 (74.03%), Postives = 140/154 (90.91%), Query Frame = 1
Query:    1 MTKIELTVNGTKHSREVEDRALLVDVLRDQLQLTGTHIGCDTSQCGCCTVHVDGRAVKSCTMLAVQASGADIVTIEGMAKGGKLHPVQQAFTDCHALQCGFCTPGMIMAISAFLKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSAELMK 462
            M K+E+ VNG +H+REVEDR LLV++LRD+L LTGTH+GCDTSQCGCCTVHV+GRAVKSC++LAVQ +GA+++TIEG+AK G+LHPVQ+AF++CH LQCGFCTPGMIMA    LKD P+PT+E+I HGLEGNLCRCTGYINIVKAVKRSA+L++
Sbjct:    1 MAKVEIKVNGVRHAREVEDRTLLVNLLRDELGLTGTHVGCDTSQCGCCTVHVNGRAVKSCSVLAVQVNGAEVLTIEGLAKNGRLHPVQRAFSECHGLQCGFCTPGMIMATIGLLKDKPNPTEEDIIHGLEGNLCRCTGYINIVKAVKRSAKLLR 154          
BLAST of mRNA_P-wetherbeei_contig14381.1.1 vs. uniprot
Match: A0A1F4A5I9_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4A5I9_9PROT)

HSP 1 Score: 257 bits (657), Expect = 5.770e-86
Identity = 117/154 (75.97%), Postives = 138/154 (89.61%), Query Frame = 1
Query:    1 MTKIELTVNGTKHSREVEDRALLVDVLRDQLQLTGTHIGCDTSQCGCCTVHVDGRAVKSCTMLAVQASGADIVTIEGMAKGGKLHPVQQAFTDCHALQCGFCTPGMIMAISAFLKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSAELMK 462
            M K+ LTVNG KH+R+VEDRALLV+VLR+ L LTGTHIGCDTSQCGCCTV +DGRAVKSC++LAVQA+G+ + TIEG+AK GKLHPVQ+AF +CH LQCGFCTPGMIMA    LKDNP+PT++EI HGLEGNLCRCTGYINI+KAVK+SA+LM+
Sbjct:    1 MAKVTLTVNGVKHTRKVEDRALLVNVLREDLGLTGTHIGCDTSQCGCCTVTLDGRAVKSCSVLAVQANGSKVTTIEGLAKNGKLHPVQRAFAECHGLQCGFCTPGMIMATVGMLKDNPNPTEDEIIHGLEGNLCRCTGYINIIKAVKKSAKLMR 154          
BLAST of mRNA_P-wetherbeei_contig14381.1.1 vs. uniprot
Match: A0A1F4BN00_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BN00_9PROT)

HSP 1 Score: 256 bits (653), Expect = 2.350e-85
Identity = 116/154 (75.32%), Postives = 134/154 (87.01%), Query Frame = 1
Query:    1 MTKIELTVNGTKHSREVEDRALLVDVLRDQLQLTGTHIGCDTSQCGCCTVHVDGRAVKSCTMLAVQASGADIVTIEGMAKGGKLHPVQQAFTDCHALQCGFCTPGMIMAISAFLKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSAELMK 462
            M K+ + VNG  H++ VEDR LLVD LRD+L+LTGTH+GCDTSQCGCCTVHV+GRAVKSCTMLA QA+GA +VTIEGMAK  KLHP+Q+AF++CH LQCGFCTPGMIMA +  LKDNP+PTD EIY GLEGNLCRCTGYINIVKAVK SA L++
Sbjct:    1 MAKVTIKVNGKNHTKTVEDRTLLVDFLRDELKLTGTHVGCDTSQCGCCTVHVNGRAVKSCTMLAAQANGASVVTIEGMAKKDKLHPIQRAFSECHGLQCGFCTPGMIMATAGLLKDNPNPTDAEIYKGLEGNLCRCTGYINIVKAVKMSARLLR 154          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14381.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2UE57_9PROT4.650e-9482.35(2Fe-2S)-binding protein n=1 Tax=Betaproteobacteri... [more]
A0A1F4DGQ3_9PROT1.280e-9179.22Carbon monoxide dehydrogenase n=1 Tax=Betaproteoba... [more]
A0A7X1P168_9PROT6.900e-9181.332Fe-2S iron-sulfur cluster binding domain-containi... [more]
A0A1F4D5X8_9PROT3.110e-9078.57Carbon monoxide dehydrogenase n=1 Tax=Betaproteoba... [more]
A0A1F3ZY09_9PROT1.060e-8779.22Carbon monoxide dehydrogenase n=1 Tax=Betaproteoba... [more]
A0A1F4HD38_9PROT8.710e-8777.12Carbon monoxide dehydrogenase n=2 Tax=unclassified... [more]
A0A3N5WTH6_9PROT3.670e-8678.29(2Fe-2S)-binding protein n=1 Tax=Betaproteobacteri... [more]
A0A7C3NS16_9PROT4.060e-8674.03(2Fe-2S)-binding protein n=1 Tax=Betaproteobacteri... [more]
A0A1F4A5I9_9PROT5.770e-8675.97Carbon monoxide dehydrogenase n=1 Tax=Betaproteoba... [more]
A0A1F4BN00_9PROT2.350e-8575.32Carbon monoxide dehydrogenase n=1 Tax=Betaproteoba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14381contigP-wetherbeei_contig14381:479..943 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog867845.KI911784_gene3219
PFAMsFer2,Fer2_2
Model size465
Max annot lvl200795|Chloroflexi
KEGG rclassRC02800
KEGG koko:K03518
KEGG ReactionR11168
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.66e-73
EggNOG OGsCOG2080@1|root,COG2080@2|Bacteria,2G6NT@200795|Chloroflexi
EC1.2.5.3
Description2Fe-2S -binding domain protein
Cds size465
COG categoryC
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186020.0503213-CDS-P-wetherbeei_contig14381:478..9431683186020.0503213-CDS-P-wetherbeei_contig14381:478..943Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14381 479..943 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14381.1.1prot_P-wetherbeei_contig14381.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14381 479..943 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14381.1.1

>prot_P-wetherbeei_contig14381.1.1 ID=prot_P-wetherbeei_contig14381.1.1|Name=mRNA_P-wetherbeei_contig14381.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp
MTKIELTVNGTKHSREVEDRALLVDVLRDQLQLTGTHIGCDTSQCGCCTV
HVDGRAVKSCTMLAVQASGADIVTIEGMAKGGKLHPVQQAFTDCHALQCG
FCTPGMIMAISAFLKDNPHPTDEEIYHGLEGNLCRCTGYINIVKAVKRSA
ELMK*
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mRNA from alignment at P-wetherbeei_contig14381:479..943-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14381.1.1 ID=mRNA_P-wetherbeei_contig14381.1.1|Name=mRNA_P-wetherbeei_contig14381.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig14381:479..943- (Phaeothamnion wetherbeei SAG_119_79)
ATGACAAAAATCGAACTGACCGTCAACGGCACCAAACACTCGCGCGAAGT CGAAGACCGCGCTTTGCTGGTGGATGTCCTGCGCGACCAACTCCAGCTCA CCGGTACCCATATCGGCTGCGACACCAGTCAATGCGGCTGCTGCACCGTT CACGTCGACGGGCGCGCGGTCAAGTCGTGCACCATGCTCGCGGTGCAGGC GAGCGGCGCCGACATCGTCACGATTGAGGGCATGGCCAAGGGCGGCAAAC TGCACCCGGTTCAGCAGGCGTTCACCGACTGCCACGCGCTGCAATGCGGT TTCTGCACGCCGGGCATGATCATGGCGATCAGCGCCTTCCTGAAGGACAA TCCGCACCCGACCGATGAAGAGATCTATCACGGGCTCGAAGGCAACTTGT GCCGCTGCACTGGCTACATCAATATCGTAAAAGCGGTGAAGCGCAGCGCC GAATTGATGAAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14381:479..943-

>mRNA_P-wetherbeei_contig14381.1.1 ID=mRNA_P-wetherbeei_contig14381.1.1|Name=mRNA_P-wetherbeei_contig14381.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig14381:479..943- (Phaeothamnion wetherbeei SAG_119_79)
ATGACAAAAATCGAACTGACCGTCAACGGCACCAAACACTCGCGCGAAGT
CGAAGACCGCGCTTTGCTGGTGGATGTCCTGCGCGACCAACTCCAGCTCA
CCGGTACCCATATCGGCTGCGACACCAGTCAATGCGGCTGCTGCACCGTT
CACGTCGACGGGCGCGCGGTCAAGTCGTGCACCATGCTCGCGGTGCAGGC
GAGCGGCGCCGACATCGTCACGATTGAGGGCATGGCCAAGGGCGGCAAAC
TGCACCCGGTTCAGCAGGCGTTCACCGACTGCCACGCGCTGCAATGCGGT
TTCTGCACGCCGGGCATGATCATGGCGATCAGCGCCTTCCTGAAGGACAA
TCCGCACCCGACCGATGAAGAGATCTATCACGGGCTCGAAGGCAACTTGT
GCCGCTGCACTGGCTACATCAATATCGTAAAAGCGGTGAAGCGCAGCGCC
GAATTGATGAAGTGA
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