mRNA_P-wetherbeei_contig14379.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14379.1.1
Unique NamemRNA_P-wetherbeei_contig14379.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14379.1.1 vs. uniprot
Match: D7FW49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW49_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 5.680e-101
Identity = 165/297 (55.56%), Postives = 217/297 (73.06%), Query Frame = 1
Query:  217 SGVMRLHGLPYGATKSDIRRFFGQKDFHVPESSIFIAVRADGRPTGDAFAIFSSDAEAQRALALDKQKIGERWVDLNMSTRADLQAQCGYAVAMADRPDAAYSGVLRLRGLPFSAGVSDVRDFFRGYALAKDGAFVINGPDLRPSGEAFAVFQSEEEAHRAMER-NRSKIGDRYIELFQCTKGDLYAATARGAGPAPPGFG---GKAPTVTCVKLRGLPFTVSEQDIFNFFVGLQVIGIFICKDGMSRPTGEGFVEFASPEHCQQAMSHNRELMQDRYVEVFCCTKDDVLAQISGAG 1095
            +GV+R+ GLP+ ATKS IR FF     +V ES+IFI  R DG+ +G+AF +FS++AEA++AL  DK+K+G+RW+DL  + +  L  + G  V MA +PDA + GVLR+RGLPF++GV ++R FFRGY + + G FV+NG D RP+GE++ +F SE+EA RA +  ++ KIGDR+IELF+ TKGDLY AT R         G   G+ P +TCVKLRGLPF V+E +IF+FF GL VIG FICKD M+RPTGEGFVEFA+ + CQ AMS NRE M DRYVEVF  +K+DVL QI  +G
Sbjct:  247 TGVVRMRGLPFEATKSQIRAFFD--GINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREP-MTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASG 540          
BLAST of mRNA_P-wetherbeei_contig14379.1.1 vs. uniprot
Match: A0A7S2XYI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYI2_9STRA)

HSP 1 Score: 307 bits (787), Expect = 2.390e-98
Identity = 156/299 (52.17%), Postives = 210/299 (70.23%), Query Frame = 1
Query:  211 DGSGVMRLHGLPYGATKSDIRRFFGQKDFHVPESSIFIAVRADGRPTGDAFAIFSSDAEAQRALALDKQKIGERWVDLNMSTRADLQAQCGYAVAMADRPDAAYSGVLRLRGLPFSAGVSDVRDFFRGYALAKDGAFVINGPDLRPSGEAFAVFQSEEEAHRAMER-NRSKIGDRYIELFQCTKGDLYAATARGAGPAPPG----FGGKAPTVTCVKLRGLPFTVSEQDIFNFFVGLQVIGIFICKDGMSRPTGEGFVEFASPEHCQQAMSHNRELMQDRYVEVFCCTKDDVLAQISGA 1092
            D +GV+R+ GLP+ A+K DIR FF    + + + +IF+  R DG+P+GDAF IF S+ +A+ AL LDK+++G RWVDL ++ +A+L  + G AV MADRPD+ Y GV+++RGLP+S GV+D+R F   + +   G ++INGPD RP+GEAF V Q+E++A  A  + ++ ++G+R++E+F  +K +LY ATA        G    FG     +TCVKLRGLPF V E  IF FF GL VIGIFIC+D   R TGEGF EF+S E CQQAMS NRE+M DRYVEVF C+KDDVLAQI  A
Sbjct:   65 DYAGVIRMRGLPFEASKEDIRHFFS--GYRIVDQNIFVVNRPDGKPSGDAFVIFGSEGDAKGALELDKKQMGSRWVDLFLTNKAELYQRVGVAVRMADRPDSNYKGVVKMRGLPYSVGVNDIRSFLSNFKVEPHGVYIINGPDGRPTGEAFTVMQTEDDAAAAKAKLDKERLGNRWVEMFVVSKAELYTATAHSPIVGMQGQNAVFGSTG--MTCVKLRGLPFKVDENMIFTFFEGLSVIGIFICRDLGGRATGEGFCEFSSMEECQQAMSRNREVMVDRYVEVFACSKDDVLAQIGQA 359          
BLAST of mRNA_P-wetherbeei_contig14379.1.1 vs. uniprot
Match: A0A835Z9Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z3_9STRA)

HSP 1 Score: 309 bits (792), Expect = 1.670e-94
Identity = 176/371 (47.44%), Postives = 218/371 (58.76%), Query Frame = 1
Query:  211 DGSGVMRLHGLPYGATKSDIRRFFGQKDFHVPESSIFIAVRADGRPTGDAFAIFSSDAEAQRALALDKQKIGERWVDLNMSTRADLQAQCG-YAVAMADRPDAAYSGVLRLRGLPFSAGVSDVRDFFRGYALAK-DGAFVINGPDLRPSGEAFAVFQSEEEAHRAMERNRSKIGDRYIELFQCTKGDLYAATAR------------------------GAGPA------------------------------------------PPGFGGKA--------PTVTCVKLRGLPFTVSEQDIFNFFVGLQVIGIFICKDGMSRPTGEGFVEFASPEHCQQAMSHNRELMQDRYVEVFCCTKDDVLAQISGAG 1095
            D  GV+++ GLP+ ATK+ I  FF    + V +S +FI +  DGRPTGDAF IF  + +A+ AL LDK+K+G RWVDL  ST+A +  + G  +V MA RPDA+Y GVLR+RGLP+SAG + +RDFF  YA++K DG  VI GPD RPSGEA+  F +E++A  A+  ++ KIGDRYIELFQ TKGDLY AT R                        G G A                                          PP FGG A        P  TC KLRGLP+ V+EQDIF+FF GL VIGIFICKD   RPTGEGFVEF + +HC Q ++ NR  M +RY+EVF CTKDDVL +ISG G
Sbjct:  355 DYRGVLKMRGLPFDATKAQIIDFF--HGYGVEDSEVFIVMGRDGRPTGDAFVIFKDETDAKSALNLDKEKLGGRWVDLFPSTKAAVYERVGPTSVEMASRPDASYRGVLRMRGLPYSAGPAQIRDFFGDYAISKSDGIHVITGPDGRPSGEAYVEFANEDDAKHALGLHKEKIGDRYIELFQVTKGDLYTATTRPSYQPTHASATHVLARTMGYRGTGGGGGAVAGGYSGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHALPPPAFGGSAGGTYPANGPPPTCAKLRGLPYQVTEQDIFDFFNGLDVIGIFICKDASGRPTGEGFVEFGTIQHCAQGLNRNRHYMLERYIEVFACTKDDVLQEISGQG 723          
BLAST of mRNA_P-wetherbeei_contig14379.1.1 vs. uniprot
Match: A0A7S3XQW7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQW7_HETAK)

HSP 1 Score: 249 bits (637), Expect = 5.100e-73
Identity = 145/304 (47.70%), Postives = 185/304 (60.86%), Query Frame = 1
Query:  211 DGS--GVMRLHGLPYGATKSDIRRFFGQKDFHVPESSIFIAVRADGRPTGDAFAIFSSDAEAQRALALDKQKIGERWVDLNMSTRADLQAQCGYAVAMADRPDAAYSGVLRLRGLPFSAGVSDVRDFFRGYALAKDGAFVINGPD-LRPS-GEAFAVFQSEEEAHRA-MERNRSKIGDRYIELFQCTKGDLYAATARGAGPAPPGFGGKAPT-------VTCVKLRGLPFTVSEQDIFNFFVGLQVIGIFICKDGMSRPTGEGFVEFASPEHCQQAMSHNRELMQDRYVEVFCCTKDDVLAQIS 1086
            DGS  GV+RL G+P+  TK  IR FFGQ  + +    +FI  R DGR  GDAFA+F S+ +A+ A ALDKQKIG RWVDL  +T+A+L  +CG AV  A RPD   + VLR+RGLPF AG +D+RDFFR Y   + G +V+   D LRP  GE +  F   + A RA M  +R  +  RY+ELF  T+GDLYA T        P    + P        +TCVK+ GLP TV E  IF FF G++VIGIFIC+D     TGEGF EF +    Q+  S N+  M+DR V +  C KDDV+ +IS
Sbjct:  332 DGSYRGVLRLRGIPFEVTKDQIREFFGQ--WALNSRDVFIVKRPDGRVAGDAFAVFRSEEDARAAQALDKQKIGGRWVDLFPTTKAELYQRCGAAVHAAARPDCEAADVLRVRGLPFQAGPADIRDFFRDYPPVEHGVYVVPALDPLRPPPGEGYVQFADRDAAERARMALDRQSLFGRYLELFLVTRGDLYAGTTFS-----PVLSMQGPNAIYDIKGMTCVKMIGLPPTVDEDMIFKFFAGVKVIGIFICRDPSGNITGEGFAEFENLTEAQRGSSRNKAQMEDRAVTLLPCAKDDVVREIS 628          
BLAST of mRNA_P-wetherbeei_contig14379.1.1 vs. uniprot
Match: A0A7S2SQA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQA4_9STRA)

HSP 1 Score: 244 bits (622), Expect = 3.650e-71
Identity = 132/292 (45.21%), Postives = 184/292 (63.01%), Query Frame = 1
Query:  223 VMRLHGLPYGATKSDIRRFFGQKDFHVPESSIFIAVRADGRPTGDAFAIFSSDAEAQRALALDKQKIGERWVDLNMSTRADLQAQCGYAVAMA-DRPDAAYSGVLRLRGLPFSAGVSDVRDFFRGYALAKDGAFVINGPDLRPSGEAFAVFQSEEEAHRAMERNRSKIGDRYIELFQCTKGDLYAATARGAGPAPPG----FGGKAPTVTCVKLRGLPFTVSEQDIFNFFVGLQVIGIFICKDGMSRPTGEGFVEFASPEHCQQAMSHNRELMQDRYVEVFCCTKDDVLAQI 1083
            V+R+ GLP+ A K +I  FF    F + E  I       GRP+G+AF +F+++ EA RAL  DK+K+ ERW+DL  S++ +L  + G   A A ++PDAA    ++LRGLPFSA V+ VR F  G ++A+ G +++NG D RP+G+ + VF SE+EA RA   N + +  R +E+ QC K DLY  T      + PG    F  + P + C +LRGLPF V E+DIF FF G++VIGIF+CKD   RPTGE FVEF   +  Q A+  NRE++ +RYVEVF   K DV+ +I
Sbjct:  225 VVRMRGLPFQAIKQNIMDFFA--GFPLMEHRIIFVTDLLGRPSGEAFVLFATEDEATRALEKDKEKLSERWIDLFPSSKIELLDRVGVGAAAAVNKPDAAVRNCVKLRGLPFSADVNQVRTFLNGLSIAEHGVYILNGNDSRPTGDGYVVFASEDEAARAAAYNGASLNGRAVEVVQCCKSDLYVDTISCPIRSRPGDRNIFYSRTP-MNCARLRGLPFRVEEKDIFQFFDGVKVIGIFMCKDMHGRPTGEAFVEFEHADGLQLALGRNREVLGERYVEVFPQAKADVVTRI 513          
BLAST of mRNA_P-wetherbeei_contig14379.1.1 vs. uniprot
Match: W7TED5_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TED5_9STRA)

HSP 1 Score: 225 bits (573), Expect = 5.000e-66
Identity = 125/303 (41.25%), Postives = 184/303 (60.73%), Query Frame = 1
Query:  205 MGDGSGVMRLHGLPYGATKSDIRRFFGQKDFHVPESSIFIAVRADGRPTGDAFAIFSSDAEAQRALALDKQKIGERWVDLNMSTRADLQAQCGYA-VAMADRPDAAYSGVLRLRGLPFSAGVSDVRDFFRGYALAKDGAFVINGPDLRPSGEAFAVFQSEEEAHRAMER-NRSKIGDRYIELFQCTKGDLYAATARG--AGPAPPGFGGKAPT-VTCVKLRGLPFTVSEQDIFNFFVGLQVIGIFICKDGMSRPTGEGFVEFASPEHCQQAMSHNRELMQ-----DRYVEVFCCTKDDVLAQI 1083
            +G  S V+R+ GLP+  T+ D++ FF         + IF   R DGR +G+AF +  S    ++AL  DKQK+G RW+D+  S   +L ++ G A V +  + D  Y+GVL++RGLPF   V DV  +F  Y +A  G F+  G D RP+GEA+ +F++ E+A  A E  N+  + +R+I+L+  +KGD+Y +T      G A  G    A T +TC +LRG+P TV+E+++F FF GLQVIG++IC+D   R TGE + EF S + CQQAMS NR+ M      DR +EV   +K++VL  I
Sbjct:   16 IGGISHVIRVRGLPFDCTRMDLQHFFASVG--PTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 316          
BLAST of mRNA_P-wetherbeei_contig14379.1.1 vs. uniprot
Match: A0A4D9D6B4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B4_9STRA)

HSP 1 Score: 227 bits (578), Expect = 6.420e-64
Identity = 126/303 (41.58%), Postives = 185/303 (61.06%), Query Frame = 1
Query:  205 MGDGSGVMRLHGLPYGATKSDIRRFFGQKDFHVPESSIFIAVRADGRPTGDAFAIFSSDAEAQRALALDKQKIGERWVDLNMSTRADLQAQCGYA-VAMADRPDAAYSGVLRLRGLPFSAGVSDVRDFFRGYALAKDGAFVINGPDLRPSGEAFAVFQSEEEAHRAMER-NRSKIGDRYIELFQCTKGDLYAATARG--AGPAPPGFGGKAPT-VTCVKLRGLPFTVSEQDIFNFFVGLQVIGIFICKDGMSRPTGEGFVEFASPEHCQQAMSHNRELMQ-----DRYVEVFCCTKDDVLAQI 1083
            +G  S V+R+ GLP+  T+ D++ FF         + IF   R DGR +G+AF +  S    ++AL  DKQK+G RW+D+  S   +L ++ G A V +  + D  Y+GVL++RGLPF   V DV  +F  Y +A  G F+  G D RP+GEA+ +F++ E+A  A E  N+  + +R+I+L+  +KGD+Y +T      G A  G    A T +TC +LRG+P TV+E+++F FFVGLQVIG++IC+D   R TGE + EF S + CQQAMS NR+ M      DR +EV   +K++VL  I
Sbjct:  337 IGGISHVIRVRGLPFDCTRMDLQHFFASVG--PTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPQGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFVGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 637          
BLAST of mRNA_P-wetherbeei_contig14379.1.1 vs. uniprot
Match: K8Z4P9_NANGC (Rna binding protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4P9_NANGC)

HSP 1 Score: 204 bits (518), Expect = 1.450e-56
Identity = 127/352 (36.08%), Postives = 181/352 (51.42%), Query Frame = 1
Query:  220 GVMRLHGLPYGATKSDIRRFFGQKDFHVPESSIFIAVRADGRPTGDAFAIFSSDAEAQRALALDKQKIGERWVDLNMSTR------------------------------------------------------------------ADLQAQCGYA-VAMADRPDAAYSGVLRLRGLPFSAGVSDVRDFFRGYALAKDGAFVINGPDLRPSGEAFAVFQSEEEAHRAMER-NRSKIGDRYIELFQCTKGDLYAATARG--AGPAPPGFGGKAPT-VTCVKLRGLPFTVSEQDIFNFFVGLQVIGIFICKDGMSRPTGEGFVEFASPEHCQQAMSHNRELMQ-----DRYVEV 1047
            GV+R+ GLPY AT+ DI  FF    F V E  + +     GR +G A+ +F +  EAQ AL LDK+KIGERW+DL +S++                                                                   +L ++ G A V +  + D  Y+GVL++RGLPF   V DV  +F  Y +A  G F+  G D RP+GEA+ +F++ E+A  A E  N+  + +R+I+L+  +KGD+Y +T      G A  G    A T +TC +LRG+P TV+E+++F FF GLQVIG++IC+D   R TGE + EF S + CQQAMS NR+ M      DR +EV
Sbjct:  219 GVVRMRGLPYSATEKDILAFFS--GFGVAEGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEV 568          
BLAST of mRNA_P-wetherbeei_contig14379.1.1 vs. uniprot
Match: K8Z4G4_NANGC (Rna binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4G4_NANGC)

HSP 1 Score: 196 bits (499), Expect = 1.480e-56
Identity = 106/255 (41.57%), Postives = 156/255 (61.18%), Query Frame = 1
Query:  265 DIRRFFGQKDFHVPESSIFIAVRADGRPTGDAFAIFSSDAEAQRALALDKQKIGERWVDLNMSTRADLQAQCGYA-VAMADRPDAAYSGVLRLRGLPFSAGVSDVRDFFRGYALAKDGAFVINGPDLRPSGEAFAVFQSEEEAHRAMER-NRSKIGDRYIELFQCTKGDLYAATARG--AGPAPPGFGGKAPT-VTCVKLRGLPFTVSEQDIFNFFVGLQVIGIFICKDGMSRPTGEGFVEFASPEHCQQAMSHN 1014
            D++ FF         + IF   R DGR +G+AF +  S    ++AL  DKQK+G RW+D+  S   +L ++ G A V +  + D  Y+GVL++RGLPF   V DV  +F  Y +A  G F+  G D RP+GEA+ +F++ E+A  A E  N+  + +R+I+L+  +KGD+Y +T      G A  G    A T +TC +LRG+P TV+E+++F FF GLQVIG++IC+D   R TGE + EF S + CQQAMS +
Sbjct:    2 DLQHFFASVG--PTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRS 254          
BLAST of mRNA_P-wetherbeei_contig14379.1.1 vs. uniprot
Match: A0A7I4AA15_PHYPA (Uncharacterized protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4AA15_PHYPA)

HSP 1 Score: 184 bits (468), Expect = 3.920e-50
Identity = 120/361 (33.24%), Postives = 174/361 (48.20%), Query Frame = 1
Query:  217 SGVMRLHGLPYGATKSDIRRFFGQKDFHVPESSIFIAVRADGRPTGDAFAIFSSDAEAQRALALDKQKIGERWVDLNMSTRADLQAQC-----GYAVA------------------MADRPDAAYSGVLRLRGLPFSAGVSDVRDFFRGYALAKDGAFVINGPDLRPSGEAFAVFQSEEEAHRAMERNRSKIGDRYIELFQCTKGDLYAATAR-------GAG--------------------------------------PAPPGFGGKAPTVTCVKLRGLPFTVSEQDIFNFFVGLQVI--GIFICKDGMSRPTGEGFVEFASPEHCQQAMSHNRELMQDRYVEVFCCTKDDVLAQISG 1089
            S V+RL GLP+ AT+SDI  FF  K   +    + I V   GR TG A+  F+S   A +AL  ++Q IG R++++     AD+Q        G  V                   M+  PD  Y+GV+R+RG+P+S   +D+  FF+G  +  DG F+    D RP+GEAF  F +EE A RAM+ +R  +G RY+ELF+ TKG++  A  +       GAG                                        P G    +  V C+K+RGLP+   +++I +FF G   +  GI I      RPTGE FVEF S +  Q+AM  +R+ +  RY+E+F  TK ++L    G
Sbjct:   20 SNVVRLRGLPFSATESDIADFF--KGLEMGPDGVVICVNFQGRSTGQAYVQFASAELANKALERNRQHIGSRYIEVFKGHPADMQGALRMVGRGSGVVSGXXXXXXXXILNTGIPGMSGNPDMRYTGVVRMRGMPYSCTSADITAFFKGMQVVADGIFLCTHADGRPTGEAFVEFVNEETAARAMQLHREPMGSRYVELFRSTKGEMMTAVQQRMYGMFSGAGGFSQFGVGQIPGMMGAFGVQGLTGMNLAAVQAAGLGSMTVPQGLSDTSEHV-CIKMRGLPYNAGQREIMDFFEGYSFLPNGIHIVMGATDRPTGEAFVEFMSSDEAQRAMERHRQNIGSRYIELFRATKSEMLLATGG 377          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14379.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW49_ECTSI5.680e-10155.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XYI2_9STRA2.390e-9852.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z9Z3_9STRA1.670e-9447.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XQW7_HETAK5.100e-7347.70Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2SQA4_9STRA3.650e-7145.21Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
W7TED5_9STRA5.000e-6641.25RNA binding protein n=1 Tax=Nannochloropsis gadita... [more]
A0A4D9D6B4_9STRA6.420e-6441.58Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K8Z4P9_NANGC1.450e-5636.08Rna binding protein (Fragment) n=1 Tax=Nannochloro... [more]
K8Z4G4_NANGC1.480e-5641.57Rna binding protein n=1 Tax=Nannochloropsis gadita... [more]
A0A7I4AA15_PHYPA3.920e-5033.24Uncharacterized protein n=5 Tax=Physcomitrium pate... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14379contigP-wetherbeei_contig14379:4..1718 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FW49
Preferred nameHNRNPH3
PFAMsRRM_1,zf-RNPHF
Model size1175
Max annot lvl2759|Eukaryota
KEGG koko:K12898,ko:K14947
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000375,GO:0000377,GO:0000398,GO:0000578,GO:0002009,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006403,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007028,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007310,GO:0007311,GO:0007314,GO:0007315,GO:0007316,GO:0007350,GO:0007351,GO:0007389,GO:0008134,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0008298,GO:0008358,GO:0008380,GO:0008543,GO:0008595,GO:0009295,GO:0009611,GO:0009653,GO:0009719,GO:0009790,GO:0009798,GO:0009880,GO:0009888,GO:0009889,GO:0009948,GO:0009950,GO:0009952,GO:0009953,GO:0009987,GO:0009994,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016331,GO:0017025,GO:0019094,GO:0019219,GO:0019221,GO:0019222,GO:0019899,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030855,GO:0031123,GO:0031124,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033036,GO:0034097,GO:0034248,GO:0034641,GO:0035282,GO:0035722,GO:0035770,GO:0042060,GO:0042221,GO:0042645,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043631,GO:0044085,GO:0044237,GO:0044238,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045451,GO:0046483,GO:0048468,GO:0048469,GO:0048477,GO:0048598,GO:0048599,GO:0048609,GO:0048729,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051246,GO:0051252,GO:0051276,GO:0051641,GO:0051704,GO:0051716,GO:0060255,GO:0060429,GO:0060810,GO:0060811,GO:0065007,GO:0070013,GO:0070671,GO:0070727,GO:0070848,GO:0070887,GO:0071013,GO:0071310,GO:0071345,GO:0071349,GO:0071363,GO:0071417,GO:0071495,GO:0071704,GO:0071774,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1990904,GO:2000112
Exons3
Evalue9.32e-102
EggNOG OGsKOG1365@1|root,KOG4211@1|root,KOG1365@2759|Eukaryota,KOG4211@2759|Eukaryota
DescriptionRNA binding
Cds size1173
COG categoryKLT
BRITEko00000,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186019.815354-CDS-P-wetherbeei_contig14379:3..3991683186019.815354-CDS-P-wetherbeei_contig14379:3..399Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14379 4..399 +
1683186019.8251534-CDS-P-wetherbeei_contig14379:697..12101683186019.8251534-CDS-P-wetherbeei_contig14379:697..1210Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14379 698..1210 +
1683186019.8323486-CDS-P-wetherbeei_contig14379:1454..17181683186019.8323486-CDS-P-wetherbeei_contig14379:1454..1718Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14379 1455..1718 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14379.1.1prot_P-wetherbeei_contig14379.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14379 4..1718 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14379.1.1

>prot_P-wetherbeei_contig14379.1.1 ID=prot_P-wetherbeei_contig14379.1.1|Name=mRNA_P-wetherbeei_contig14379.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=391bp
GGGGGFGFGGGGGFGNGMGGGGFGGGYGGRGGFGGSGGGGGPFGPGGGGG
GMGGPGPYGGFRGGFDRGMGDGSGVMRLHGLPYGATKSDIRRFFGQKDFH
VPESSIFIAVRADGRPTGDAFAIFSSDAEAQRALALDKQKIGERWVDLNM
STRADLQAQCGYAVAMADRPDAAYSGVLRLRGLPFSAGVSDVRDFFRGYA
LAKDGAFVINGPDLRPSGEAFAVFQSEEEAHRAMERNRSKIGDRYIELFQ
CTKGDLYAATARGAGPAPPGFGGKAPTVTCVKLRGLPFTVSEQDIFNFFV
GLQVIGIFICKDGMSRPTGEGFVEFASPEHCQQAMSHNRELMQDRYVEVF
CCTKDDVLAQISGAGAGGGGGGGGGVSGPRGGGMPRSGPGG
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mRNA from alignment at P-wetherbeei_contig14379:4..1718+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14379.1.1 ID=mRNA_P-wetherbeei_contig14379.1.1|Name=mRNA_P-wetherbeei_contig14379.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1715bp|location=Sequence derived from alignment at P-wetherbeei_contig14379:4..1718+ (Phaeothamnion wetherbeei SAG_119_79)
GGCGGCGGCGGCGGTTTCGGCTTTGGTGGCGGCGGCGGCTTCGGCAACGG CATGGGTGGTGGTGGCTTTGGAGGCGGGTACGGTGGGCGTGGCGGGTTCG GCGGCAGCGGCGGCGGCGGCGGCCCGTTCGGACCCGGCGGCGGTGGCGGT GGCATGGGTGGGCCCGGTCCGTACGGCGGCTTCCGCGGCGGCTTCGATCG CGGCATGGGCGATGGCTCCGGAGTGATGCGGCTGCACGGCCTGCCCTACG GCGCCACCAAGTCGGACATCCGGCGCTTCTTTGGGCAGAAGGACTTCCAC GTCCCCGAGAGCTCCATCTTCATCGCGGTCCGCGCCGACGGCCGCCCGAC CGGCGACGCGTTCGCCATCTTCTCCAGCGATGCCGAGGCGCAGCGGGTGA GCGAGGAGCCAAAAGACGTGTCAGAAGAGGCAAAGAAATCGAAGAGCAGG CCGGGCGGCGAAAGCGGCTAAGGAGCTTCTTTTCAGCAGCGGGACTGCCC GTTTCTTCTTCATTTACACTTCCCCCTCTATTGTTAGAGAGTATTGTGAT TCGGTTCTGGGGAATGGTCCTGTCTTTCTGAATTATTCTTTTGCCTTGCC GTAGCGTCTTCCTCACATTCTAACCGTATTTTTTCGTCTTCCATTGCCGT TACCGCATCATCGCACCGTTACGGCCCCGCTCTGCTCCTCTCAGGCGCTG GCGCTGGACAAGCAGAAGATTGGGGAGCGGTGGGTGGACCTCAACATGTC GACGCGCGCCGACCTGCAGGCGCAGTGCGGCTACGCTGTCGCCATGGCCG ACCGCCCCGACGCCGCCTACAGCGGCGTGCTCCGTCTCCGTGGCCTGCCC TTCTCGGCCGGCGTCTCAGACGTCCGCGACTTCTTCCGCGGCTACGCGCT GGCGAAAGACGGCGCCTTCGTCATCAACGGCCCGGATCTGCGGCCGTCCG GGGAGGCGTTCGCCGTGTTTCAGAGCGAAGAGGAGGCCCACCGGGCGATG GAGCGCAACCGCAGCAAGATCGGGGACCGCTACATCGAGCTGTTCCAGTG CACCAAGGGGGACCTGTACGCGGCGACGGCGCGCGGGGCCGGGCCGGCGC CGCCCGGTTTCGGGGGCAAGGCGCCGACGGTGACGTGCGTCAAGCTACGC GGGCTGCCCTTCACCGTGTCGGAGCAGGACATCTTCAACTTCTTCGTCGG CCTCCAGGTCAGCTTTTGTTACGTTTTCTTGCGCAGTCCGATATGTGTTC TATGCTCTCTCTTGTTTGTCGGCAAGTTCTTTACGCTCTGTGGTGCCTTG ATGTCTGTCTGTGCCTAAGGCAACAACTTCTGGCCTTTTGTTCGTCATAT TTTAACTGGCCATTCTTTTATTCATTTGCCGTTCCATCATTTTGCTCCCG GTCCCGATGGGCTCCGCTTCGCCTGGCCATCCCAATGAATGAATGCGGCA GGTGATTGGCATCTTCATCTGCAAGGACGGCATGTCGCGGCCCACCGGCG AGGGCTTCGTCGAATTCGCATCCCCCGAGCACTGCCAGCAAGCCATGTCC CACAACCGCGAGCTGATGCAAGATCGCTATGTCGAGGTCTTCTGTTGCAC CAAGGATGACGTCCTCGCCCAGATCAGCGGCGCCGGTGCTGGTGGTGGCG GCGGTGGCGGCGGAGGCGTCAGTGGCCCGCGGGGCGGCGGCATGCCGCGC AGCGGGCCCGGCGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14379:4..1718+

>mRNA_P-wetherbeei_contig14379.1.1 ID=mRNA_P-wetherbeei_contig14379.1.1|Name=mRNA_P-wetherbeei_contig14379.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1173bp|location=Sequence derived from alignment at P-wetherbeei_contig14379:4..1718+ (Phaeothamnion wetherbeei SAG_119_79)
GGCGGCGGCGGCGGTTTCGGCTTTGGTGGCGGCGGCGGCTTCGGCAACGG
CATGGGTGGTGGTGGCTTTGGAGGCGGGTACGGTGGGCGTGGCGGGTTCG
GCGGCAGCGGCGGCGGCGGCGGCCCGTTCGGACCCGGCGGCGGTGGCGGT
GGCATGGGTGGGCCCGGTCCGTACGGCGGCTTCCGCGGCGGCTTCGATCG
CGGCATGGGCGATGGCTCCGGAGTGATGCGGCTGCACGGCCTGCCCTACG
GCGCCACCAAGTCGGACATCCGGCGCTTCTTTGGGCAGAAGGACTTCCAC
GTCCCCGAGAGCTCCATCTTCATCGCGGTCCGCGCCGACGGCCGCCCGAC
CGGCGACGCGTTCGCCATCTTCTCCAGCGATGCCGAGGCGCAGCGGGCGC
TGGCGCTGGACAAGCAGAAGATTGGGGAGCGGTGGGTGGACCTCAACATG
TCGACGCGCGCCGACCTGCAGGCGCAGTGCGGCTACGCTGTCGCCATGGC
CGACCGCCCCGACGCCGCCTACAGCGGCGTGCTCCGTCTCCGTGGCCTGC
CCTTCTCGGCCGGCGTCTCAGACGTCCGCGACTTCTTCCGCGGCTACGCG
CTGGCGAAAGACGGCGCCTTCGTCATCAACGGCCCGGATCTGCGGCCGTC
CGGGGAGGCGTTCGCCGTGTTTCAGAGCGAAGAGGAGGCCCACCGGGCGA
TGGAGCGCAACCGCAGCAAGATCGGGGACCGCTACATCGAGCTGTTCCAG
TGCACCAAGGGGGACCTGTACGCGGCGACGGCGCGCGGGGCCGGGCCGGC
GCCGCCCGGTTTCGGGGGCAAGGCGCCGACGGTGACGTGCGTCAAGCTAC
GCGGGCTGCCCTTCACCGTGTCGGAGCAGGACATCTTCAACTTCTTCGTC
GGCCTCCAGGTGATTGGCATCTTCATCTGCAAGGACGGCATGTCGCGGCC
CACCGGCGAGGGCTTCGTCGAATTCGCATCCCCCGAGCACTGCCAGCAAG
CCATGTCCCACAACCGCGAGCTGATGCAAGATCGCTATGTCGAGGTCTTC
TGTTGCACCAAGGATGACGTCCTCGCCCAGATCAGCGGCGCCGGTGCTGG
TGGTGGCGGCGGTGGCGGCGGAGGCGTCAGTGGCCCGCGGGGCGGCGGCA
TGCCGCGCAGCGGGCCCGGCGGG
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