prot_P-wetherbeei_contig14368.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14368.2.1
Unique Nameprot_P-wetherbeei_contig14368.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length192
Homology
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: A0A7S2WN45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WN45_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 7.260e-12
Identity = 62/199 (31.16%), Postives = 86/199 (43.22%), Query Frame = 0
Query:    2 APRFELRSDRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPI-----PLPSAAVVSTSAQEGGSDXXXXXXXXXXXXXXXXXXXXXXXVSKDRGDESVPGDESAGXXXXXXXXXXXXXXXRADMESDAPSPRSRGN-GGRTTRGLATTSSRQPEKGQPAATSGRCSGSGSSGK--ARVARAADCPCKSGRRYKECC 192
            APR EL + +P  A + +HLSYHGE HYNSVRA DD    PA+ I     P+P+AA   T      ++                         ++     V GD  A                  D ++ + +P + G  GG      A ++   PE G      G+ S SG SG+   + ARA  CPC SG++YK+CC
Sbjct:   73 APRLELYASQPEFATATLHLSYHGEFHYNSVRAADDFGPGPAQAIAMDRPPMPAAATGGTDRGSSSAENLSAVEKQVRISVPWVDLEVIRGTLRE-----VNGDADAAVELLVSGFIPPDPAAEGDHDAVSQNPGAIGVVGGEVAASSAGSADSSPEAGDQGG--GKLSASGKSGQKSGKTARADLCPCGSGKKYKKCC 264          
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: A0A7S2WLR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLR9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.140e-11
Identity = 62/199 (31.16%), Postives = 86/199 (43.22%), Query Frame = 0
Query:    2 APRFELRSDRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPI-----PLPSAAVVSTSAQEGGSDXXXXXXXXXXXXXXXXXXXXXXXVSKDRGDESVPGDESAGXXXXXXXXXXXXXXXRADMESDAPSPRSRGN-GGRTTRGLATTSSRQPEKGQPAATSGRCSGSGSSGK--ARVARAADCPCKSGRRYKECC 192
            APR EL + +P  A + +HLSYHGE HYNSVRA DD    PA+ I     P+P+AA   T      ++                         ++     V GD  A                  D ++ + +P + G  GG      A ++   PE G      G+ S SG SG+   + ARA  CPC SG++YK+CC
Sbjct:  172 APRLELYASQPEFATATLHLSYHGEFHYNSVRAADDFGPGPAQAIAMDRPPMPAAATGGTDRGSSSAENLSAVEKQVRISVPWVDLEVIRGTLRE-----VNGDADAAVELLVSGFIPPDPAAEGDHDAVSQNPGAIGVVGGEVAASSAGSADSSPEAGDQGG--GKLSASGKSGQKSGKTARADLCPCGSGKKYKKCC 363          
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: D7FGR1_ECTSI (OTU domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR1_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 2.180e-6
Identity = 60/212 (28.30%), Postives = 81/212 (38.21%), Query Frame = 0
Query:    2 APRFELRSDRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPIPLPSAAVVSTSAQEGGSDXXXXXXXXXXXXXXXXXXXXXXX-------VSKDRGDESV---------PG-----DESAGXXXXXXXXXXXXXXXRADMESDAPSPRSRGNGGRTTRGLATTSSRQPEKGQPAATSGRCSGSGSSGKARVARAADCPCKSGRRYKECC 192
            APRF +  ++   A   +HLSYHGE+HYNSVRA+ D +  PA PI L       T   +GGS                                +  RGD+++         PG     D +AG                   E+  P    +G GG    G+A  S +  +K                    VARA+DCPC SG +YK+CC
Sbjct:  148 APRFFIPCEK---ARRTIHLSYHGEHHYNSVRAIGDEANGPALPITL------QTPTSKGGSHKRESPWPEEEAAVARSCPWASPPNIVAALETTGGRGDDAIELLIAARNEPGLEEGVDNTAGDKKGTGKLEDGGDSGEKPQENGRPGE-GKGRGG----GVAKKSEKAAKK--------------------VARASDCPCGSGLKYKKCC 325          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S2WN45_9STRA7.260e-1231.16Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WLR9_9STRA1.140e-1131.16Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D7FGR1_ECTSI2.180e-628.30OTU domain-containing protein, putative n=1 Tax=Ec... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 119..192
e-value: 7.8E-5
score: 25.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..167
IPR004027SEC-C motifPFAMPF02810SEC-Ccoord: 179..192
e-value: 2.3E-4
score: 21.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14368contigP-wetherbeei_contig14368:886..1656 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14368.2.1mRNA_P-wetherbeei_contig14368.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14368 886..1668 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14368.2.1 ID=prot_P-wetherbeei_contig14368.2.1|Name=mRNA_P-wetherbeei_contig14368.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=192bp
MAPRFELRSDRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPIPLPS
AAVVSTSAQEGGSDGNGFGGGDGGGDGGGGGGGSGKGVSKDRGDESVPGD
ESAGAEAANGDDAADSDGARADMESDAPSPRSRGNGGRTTRGLATTSSRQ
PEKGQPAATSGRCSGSGSSGKARVARAADCPCKSGRRYKECC
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004027SEC_C_motif