prot_P-wetherbeei_contig14367.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14367.2.1
Unique Nameprot_P-wetherbeei_contig14367.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length148
Homology
BLAST of mRNA_P-wetherbeei_contig14367.2.1 vs. uniprot
Match: D7FPN7_ECTSI (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN7_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 2.080e-16
Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 0
Query:   16 ISDEEYVVVLLDLETTGLTPKLAGVLQIAAKVLGSDHEDDAFAAFVAPWSGRVPNDISKLTGIDDAMLAAAGAQPFHKTFPRFLSWLDGV 105
            +S+  + VV++D+ETTGL  K   V+Q+AAKVLGS++   +FA FV P +  VP  + ++TGI   +LAA GA+PF + +P F +WL GV
Sbjct:  739 LSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEFVDPGAVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGV 828          
BLAST of mRNA_P-wetherbeei_contig14367.2.1 vs. uniprot
Match: A0A6H5JXY9_9PHAE (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.370e-15
Identity = 43/104 (41.35%), Postives = 67/104 (64.42%), Query Frame = 0
Query:    5 SPAGRRRRVPR---ISDEEYVVVLLDLETTGLTPKLAGVLQIAAKVLGSDHEDDAFAAFVAPWSGRVPNDISKLTGIDDAMLAAAGAQPFHKTFPRFLSWLDGV 105
            +P+G    + R   +S+  + VV++D+ETTGL  K   V+Q+AAKVLGS++   +FA ++ P    VP  + ++TGI   +LAA GA+PF + +P F +WL GV
Sbjct: 1124 APSGEGVAIIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEYIDPGVVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGV 1227          
BLAST of mRNA_P-wetherbeei_contig14367.2.1 vs. uniprot
Match: A0A7S3UQS9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQS9_HETAK)

HSP 1 Score: 59.3 bits (142), Expect = 6.700e-8
Identity = 38/92 (41.30%), Postives = 49/92 (53.26%), Query Frame = 0
Query:   19 EEYVVVLLDLETTGLTPKLAGVLQIAAKVLGSDHEDDAFAAFV-----APWSGRVPNDISKLTGIDDAMLAAAGAQPFHKTFPRFLSWLDGV 105
            E  V+VLLD+ETTGL      VLQ+AAKVLGS     AFA ++      PW+        ++TGI   +L   GA PF + +  F  WL  V
Sbjct:   38 ENVVIVLLDVETTGLDAGRHRVLQLAAKVLGSRAPGAAFATYIRPPENTPWA----EGAREVTGITWEVLEKEGALPFSEAWALFRRWLAEV 125          
BLAST of mRNA_P-wetherbeei_contig14367.2.1 vs. uniprot
Match: UPI001CE2B531 (DUF294 nucleotidyltransferase-like domain-containing protein n=1 Tax=Bradyrhizobium sp. WSM 1738 TaxID=2821405 RepID=UPI001CE2B531)

HSP 1 Score: 56.6 bits (135), Expect = 1.680e-6
Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = 0
Query:   24 VLLDLETTGLTPKLAGVLQIAAKVLGSDH--EDDAFAAFVAPWSGRVPNDISKLTGIDDAMLAAAGAQPFHKTFPRFLSWL 102
            V++D ETTGL P+ A ++++AA  L +    + D+F   + P +  +P  I+++ GIDDA +AAA   PF   +PRF  +L
Sbjct:   16 VVVDTETTGLDPRKARIIELAAVRLSAGKLVDGDSFRQLIRPGAESIPAGITEVHGIDDAAVAAA--PPFADVWPRFREYL 94          
BLAST of mRNA_P-wetherbeei_contig14367.2.1 vs. uniprot
Match: A0A432RAQ9_9AQUI (3'-5' exonuclease n=1 Tax=Hydrogenothermus sp. TaxID=2231113 RepID=A0A432RAQ9_9AQUI)

HSP 1 Score: 54.7 bits (130), Expect = 3.330e-6
Identity = 33/87 (37.93%), Postives = 49/87 (56.32%), Query Frame = 0
Query:   20 EYVVVLLDLETTGLTPKLAGVLQIAAKVLGSDHEDDAFAAFVAPWSGRVPNDISKLTGIDDAMLAAAGAQPFHKT-FPRFLSWLDGV 105
            E   V+LDLETTG  P+ + +++IA          D F + V P  G +P++ISKLTGI +A++     QP   T FP F  +++G 
Sbjct:    9 EATFVILDLETTGFNPENSSIIEIAGIKYQGGMVVDKFHSLVKPDEGFIPDNISKLTGITNALVID---QPRIDTVFPLFKKFIEGT 92          
BLAST of mRNA_P-wetherbeei_contig14367.2.1 vs. uniprot
Match: A0A2N3GAS5_9ACTN (DNA polymerase III subunit epsilon n=1 Tax=Actinobacteria bacterium HGW-Actinobacteria-10 TaxID=2013645 RepID=A0A2N3GAS5_9ACTN)

HSP 1 Score: 55.5 bits (132), Expect = 4.390e-6
Identity = 39/89 (43.82%), Postives = 48/89 (53.93%), Query Frame = 0
Query:   20 EYVVVLLDLETTGLTPKLAGVLQIAAKVLGSDHEDDAFAAFVAPWSGR-VPNDISKLTGIDDAMLAAA-GAQPFHKTFPRFLSWLDGVA 106
            E  VV +D+ETTG  P    +++IAA         D F   V P  GR VP +I+KLTGIDDAMLA A G +     F RF    D +A
Sbjct:   39 EDEVVFVDIETTGFDPDRDAIIEIAALRAKGPEMLDRFHTMVDP--GRPVPLEITKLTGIDDAMLAGAPGPEAAATDFARFAGGADIIA 125          
BLAST of mRNA_P-wetherbeei_contig14367.2.1 vs. uniprot
Match: A0A831YDC5_9AQUI (3'-5' exonuclease n=2 Tax=Sulfurihydrogenibium TaxID=212790 RepID=A0A831YDC5_9AQUI)

HSP 1 Score: 54.3 bits (129), Expect = 4.560e-6
Identity = 31/81 (38.27%), Postives = 46/81 (56.79%), Query Frame = 0
Query:   19 EEYVVVLLDLETTGLTPKLAGVLQIAAKVLGSDHEDDAFAAFVAPWSGRVPNDISKLTGIDDAMLAAAGAQPFHKTFPRFL 99
            EE   ++LDLETTGL P  + +++IAA  +      D F   V P  G +P +I+KLTGI +A++         + FP+FL
Sbjct:    7 EEATFLILDLETTGLNPVNSEIIEIAALKVEGGVVVDKFHTLVKPSIGFIPPNITKLTGITNALVV--DKPTIKEVFPQFL 85          
BLAST of mRNA_P-wetherbeei_contig14367.2.1 vs. uniprot
Match: A0A7X7ZVA2_9CLOT (PHP domain-containing protein (Fragment) n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X7ZVA2_9CLOT)

HSP 1 Score: 55.1 bits (131), Expect = 5.620e-6
Identity = 37/93 (39.78%), Postives = 50/93 (53.76%), Query Frame = 0
Query:   24 VLLDLETTGLTPKLAGVLQIAAKVLGSDHEDDAFAAFVAPWSGRVPNDISKLTGIDDAMLAAAGAQPFHKTFPRFLSWLDGVASRPASAHAAS 116
            V+ D+ETTGL P   G+ +I A  + +    D F+ FV P    +P  I+KLTGI DAM+A  GA    +    FL +  G+   P  AH AS
Sbjct:  422 VVFDIETTGLNPSRDGITEIGAVKVENGKIADRFSTFVDPGM-PIPEHITKLTGITDAMVA--GAPGISRAVGDFLDFAAGL---PLVAHNAS 508          
BLAST of mRNA_P-wetherbeei_contig14367.2.1 vs. uniprot
Match: A0A7X9AI67_9CLOT (DNA polymerase III PolC-type n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X9AI67_9CLOT)

HSP 1 Score: 55.1 bits (131), Expect = 6.150e-6
Identity = 37/93 (39.78%), Postives = 49/93 (52.69%), Query Frame = 0
Query:   24 VLLDLETTGLTPKLAGVLQIAAKVLGSDHEDDAFAAFVAPWSGRVPNDISKLTGIDDAMLAAAGAQPFHKTFPRFLSWLDGVASRPASAHAAS 116
            V+ D+ETTGL P   G+ +I A  +      D F+ FV P    +P  I+KLTGI DAM+A  GA    +    FL +  G+   P  AH AS
Sbjct:  376 VVFDIETTGLNPTKDGITEIGAVKIEDGKIVDTFSTFVDPGM-PIPEHITKLTGITDAMVA--GAPGISQAVGDFLDFAGGL---PVVAHNAS 462          
BLAST of mRNA_P-wetherbeei_contig14367.2.1 vs. uniprot
Match: A0A7X8M5V4_9CLOT (DNA polymerase III PolC-type n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X8M5V4_9CLOT)

HSP 1 Score: 54.3 bits (129), Expect = 1.140e-5
Identity = 36/93 (38.71%), Postives = 50/93 (53.76%), Query Frame = 0
Query:   24 VLLDLETTGLTPKLAGVLQIAAKVLGSDHEDDAFAAFVAPWSGRVPNDISKLTGIDDAMLAAAGAQPFHKTFPRFLSWLDGVASRPASAHAAS 116
            V+ D+ETTGL     G+ +I A  + +    D F+ FV P    +P  I+KLTGI DAM+A  GA    +    FL ++ G+   P  AH AS
Sbjct:  423 VVFDIETTGLNASRDGITEIGAVKVENGKVIDNFSTFVNPGM-PIPESITKLTGITDAMVA--GAPGIDQAIGEFLDFVGGL---PVVAHNAS 509          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14367.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FPN7_ECTSI2.080e-1646.67ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus... [more]
A0A6H5JXY9_9PHAE1.370e-1541.35ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus... [more]
A0A7S3UQS9_HETAK6.700e-841.30Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI001CE2B5311.680e-638.27DUF294 nucleotidyltransferase-like domain-containi... [more]
A0A432RAQ9_9AQUI3.330e-637.933'-5' exonuclease n=1 Tax=Hydrogenothermus sp. Tax... [more]
A0A2N3GAS5_9ACTN4.390e-643.82DNA polymerase III subunit epsilon n=1 Tax=Actinob... [more]
A0A831YDC5_9AQUI4.560e-638.273'-5' exonuclease n=2 Tax=Sulfurihydrogenibium Tax... [more]
A0A7X7ZVA2_9CLOT5.620e-639.78PHP domain-containing protein (Fragment) n=1 Tax=C... [more]
A0A7X9AI67_9CLOT6.150e-639.78DNA polymerase III PolC-type n=1 Tax=Clostridiacea... [more]
A0A7X8M5V4_9CLOT1.140e-538.71DNA polymerase III PolC-type n=1 Tax=Clostridiacea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 24..103
e-value: 1.0E-7
score: 32.6
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 15..129
e-value: 4.7E-15
score: 57.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..136
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 20..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14367contigP-wetherbeei_contig14367:1281..1724 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14367.2.1mRNA_P-wetherbeei_contig14367.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14367 1279..1724 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14367.2.1 ID=prot_P-wetherbeei_contig14367.2.1|Name=mRNA_P-wetherbeei_contig14367.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp
VPASSPAGRRRRVPRISDEEYVVVLLDLETTGLTPKLAGVLQIAAKVLGS
DHEDDAFAAFVAPWSGRVPNDISKLTGIDDAMLAAAGAQPFHKTFPRFLS
WLDGVASRPASAHAASSSSEQRDMQQEEHLLADAISPMPRLRQPLMPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf