mRNA_P-wetherbeei_contig14362.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14362.2.1
Unique NamemRNA_P-wetherbeei_contig14362.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14362.2.1 vs. uniprot
Match: UPI001FEF79D9 (exodeoxyribonuclease VII large subunit n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI001FEF79D9)

HSP 1 Score: 348 bits (892), Expect = 5.880e-115
Identity = 188/300 (62.67%), Postives = 225/300 (75.00%), Query Frame = 1
Query:    1 AVIRDILHRLSDRFPRHVLVWPVRVQGETSAAEVAAAIIGFNAMANPPDLIIVARGGGSLEDLWGFNEEIVVRAVAGSKIPIISAVGHETDTTLIDLVSDHRAPTPSAAAERAVPVRADLLAELASLNARQARSIARYFDERRTRLRSAARALPKPDEFLALVRQRFDTVAARLPQALRANVQHHRVDLAKISGRLSVRPIVQNQQELKRRLLDSNLRGNRAVSRVLQSFKDRLSAEAKLFAALNYTSVLARGFALVLDTKGQPIKQAAAVSPGQTLKIQFSDDTLTVQAARKTSQGELF 900
            AVIRDILHRL+DRFPR VLVWPVRVQGET+AAEVAAAI GFN MA+ PDL+IVARGGGSLEDLW FNEEIV RAV  S IP+ISAVGHETDTTLID VSD RAPTP+AAAERAVPVRADL+AELASL ARQ R ++R F E + RL+SAARALPKPD+ LA  RQR D+ AA LP+ LRAN+Q H + L + SGRLS+ P+     E +RRL +S  R  R ++++L   +D LS+E KL  AL Y SVLARGFA++ D  G P++    + P   L+++ +D  L V A    +Q  LF
Sbjct:  154 AVIRDILHRLNDRFPRQVLVWPVRVQGETAAAEVAAAIKGFNEMADKPDLLIVARGGGSLEDLWPFNEEIVARAVVASAIPLISAVGHETDTTLIDFVSDWRAPTPTAAAERAVPVRADLVAELASLEARQKRGLSRVFSEVKLRLQSAARALPKPDDILAQARQRLDSSAAALPRGLRANLQSHALTLTRQSGRLSLGPLANRVTEARRRLTESQGRATRGLTQLLARKRDMLSSETKLLGALGYKSVLARGFAVLRDASGTPLRGITGIKPNAQLQVEMADGKLDVTATPPKAQKSLF 453          
BLAST of mRNA_P-wetherbeei_contig14362.2.1 vs. uniprot
Match: UPI0019BF8BC9 (Exodeoxyribonuclease VII large subunit n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI0019BF8BC9)

HSP 1 Score: 343 bits (881), Expect = 4.050e-113
Identity = 185/300 (61.67%), Postives = 225/300 (75.00%), Query Frame = 1
Query:    1 AVIRDILHRLSDRFPRHVLVWPVRVQGETSAAEVAAAIIGFNAMANPPDLIIVARGGGSLEDLWGFNEEIVVRAVAGSKIPIISAVGHETDTTLIDLVSDHRAPTPSAAAERAVPVRADLLAELASLNARQARSIARYFDERRTRLRSAARALPKPDEFLALVRQRFDTVAARLPQALRANVQHHRVDLAKISGRLSVRPIVQNQQELKRRLLDSNLRGNRAVSRVLQSFKDRLSAEAKLFAALNYTSVLARGFALVLDTKGQPIKQAAAVSPGQTLKIQFSDDTLTVQAARKTSQGELF 900
            AVIRDILHRL DRFPRHV+VWPVRVQGETSAAEVAAAI GFN M+  PDLIIVARGGGSLEDLWGFN+EIVVRAVA S+IP+ISAVGHETDTTLID VSD RAPTP+AAAERAVPVR +L+A++ASL AR  R   R  +ER TR+R+A RALP+P+E LAL RQR DT A RL QALRAN Q HR    ++SGRLS++ +       ++RL +   R  +++ R+    + +L +  KL  +L+Y SVL RGFA+V DTKG P+  A+AV P Q L ++F+D  + V+   K  QG LF
Sbjct:  167 AVIRDILHRLKDRFPRHVIVWPVRVQGETSAAEVAAAIAGFNRMSPGPDLIIVARGGGSLEDLWGFNDEIVVRAVAASQIPLISAVGHETDTTLIDHVSDWRAPTPTAAAERAVPVRIELVAQIASLAARHERCWRRGMEERETRVRAAGRALPRPEEILALARQRHDTAAGRLVQALRANTQSHRARFERVSGRLSLKAVRNTMGNDRKRLTELAQRNAQSLFRIADFKRQKLESTFKLLTSLSYKSVLQRGFAVVRDTKGLPVHSASAVKPAQQLAVEFADGRVNVREDSKPKQGSLF 466          
BLAST of mRNA_P-wetherbeei_contig14362.2.1 vs. uniprot
Match: A0A7V2SND1_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7V2SND1_9HYPH)

HSP 1 Score: 328 bits (842), Expect = 2.610e-107
Identity = 183/309 (59.22%), Postives = 224/309 (72.49%), Query Frame = 1
Query:    1 AVIRDILHRLSDRFPRHVLVWPVRVQGETSAAEVAAAIIGFNAMA--NPPDLIIVARGGGSLEDLWGFNEEIVVRAVAGSKIPIISAVGHETDTTLIDLVSDHRAPTPSAAAERAVPVRADLLAELASLNARQARSIARYFDERRTRLRSAARALPKPDEFLALVRQRFDTVAARLPQALRANVQHHRVDLAKISGRLSVRPIVQNQQELKRRLLDSNLRGNRAVSRVLQSFKDRLSAEAKLFAALNYTSVLARGFALVLDTKGQPIKQAAAVSPGQTLKIQFSDDTL--TVQAAR-----KTSQGELF 900
            AVIRDILHRL+DRFPRHVLVWPVRVQGETSAAEVAA I GFNAMA  N PDLIIVARGGGSLEDLWGFNEEIV RA A SKIP+ISAVGHETD TLID ++D RAPTP+AAAERAVPVR DL A +A L AR  R++ R   ERRTR++SAARALPKPD+ LA  RQR+DT   RL QAL+ N+Q HR    +I+GR +++P+ Q  +  +  LL  +L+  RA+ R++   + +L+  AKL  + +Y SVLARGFA+V D  G+P+   A  SPG  + I+  D  L  T+  ++     K +QG L 
Sbjct:  152 AVIRDILHRLADRFPRHVLVWPVRVQGETSAAEVAAGINGFNAMAGDNRPDLIIVARGGGSLEDLWGFNEEIVARAAAASKIPLISAVGHETDWTLIDFIADERAPTPTAAAERAVPVRRDLQAMVADLGARNPRALQRLMAERRTRVQSAARALPKPDDLLAFARQRYDTAQGRLAQALKTNLQSHRNAYERIAGRHTLKPLRQQIERHRETLLRFSLQSTRAIQRLIDRKQQQLTMAAKLNQSFSYKSVLARGFAVVKDDSGRPVTSTACASPGGRISIELKDGKLKGTLDGSKRPAPVKETQGSLL 460          
BLAST of mRNA_P-wetherbeei_contig14362.2.1 vs. uniprot
Match: A0A2W2AS93_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2AS93_9HYPH)

HSP 1 Score: 328 bits (841), Expect = 4.300e-107
Identity = 182/290 (62.76%), Postives = 223/290 (76.90%), Query Frame = 1
Query:    1 AVIRDILHRLSDRFPRHVLVWPVRVQGETSAAEVAAAIIGFNAMANPPDLIIVARGGGSLEDLWGFNEEIVVRAVAGSKIPIISAVGHETDTTLIDLVSDHRAPTPSAAAERAVPVRADLLAELASLNARQARSIARYFDERRTRLRSAARALPKPDEFLALVRQRFDTVAARLPQALRANVQHHRVDLAKISGRLSVRPIVQNQQELKRRLLD-SNLRGNRAVSRVLQSFKDRLSAEAKLFAALNYTSVLARGFALVLDTKGQPIKQAAAVSPGQTLKIQFSDDTLTVQ 867
            AVIRDILHRL+DRFPRHV+VWPVRVQGET AAEVAAAI GFN MA  PD+IIVARGGGSLEDLWGFNEEIVVRA A S IP+ISAVGHETDTTLID  +D RAPTP+AAAE+AVPVRADL+AE+A L+AR    ++R  DERRTRLRSAARALP+PDE LALVRQRFD+ A RL QAL+AN + H   L +++ RL++ P+ ++    +RR LD S  R  +A+SR++   + R    AKL  +L+Y SVL RGFALV D KG+P+  A  +     L+++F+D  + V+
Sbjct:  167 AVIRDILHRLNDRFPRHVIVWPVRVQGETCAAEVAAAIAGFNDMAKKPDVIIVARGGGSLEDLWGFNEEIVVRAAAASAIPVISAVGHETDTTLIDYAADLRAPTPTAAAEKAVPVRADLVAEVARLDARLQGGLSRCMDERRTRLRSAARALPRPDEILALVRQRFDSAAGRLVQALKANTREHGARLNRVAPRLTLAPM-RSMIANERRSLDLSGRRAAQALSRLVAFQRQRFDGVAKLAESLSYKSVLRRGFALVRDEKGRPVHYAGDIKQWAALRLEFADGEVQVR 455          
BLAST of mRNA_P-wetherbeei_contig14362.2.1 vs. uniprot
Match: A0A6G6WY12_9HYPH (Exodeoxyribonuclease 7 large subunit n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6G6WY12_9HYPH)

HSP 1 Score: 327 bits (839), Expect = 1.170e-106
Identity = 183/296 (61.82%), Postives = 217/296 (73.31%), Query Frame = 1
Query:    1 AVIRDILHRLSDRFPRHVLVWPVRVQGETSAAEVAAAIIGFNAMANPPDLIIVARGGGSLEDLWGFNEEIVVRAVAGSKIPIISAVGHETDTTLIDLVSDHRAPTPSAAAERAVPVRADLLAELASLNARQARSIARYFDERRTRLRSAARALPKPDEFLALVRQRFDTVAARLPQALRANVQHHRVDLAKISGRLSVRPIVQNQQELKRRLLDSNLRGNRAVSRVLQSFKDRLSAEAKLFAALNYTSVLARGFALVLDTKGQPIKQAAAVSPGQTLKIQFSDDTLTVQAARKTSQ 888
            AVIRDILHRL+DRFPRHV+VWPVRVQGETSAAEVA AI GFNAMA  PDL+IVARGGGSLEDLWGFNEEIVVRAVA S IP+I+AVGHETD TLID V+D RAPTP+AAAERAVPVRADLLA++ASL AR  R + R   ERRTR+R+AARALP+PD+ LAL RQRFD+V+ RL  AL  N   HR D    + RL+   + +N  E  R L        R + RV++    RL+A  KL  +L+Y SVL RG+ALV   + +P+  AA V PGQ L+I+F D  +  QA   +SQ
Sbjct:  164 AVIRDILHRLNDRFPRHVMVWPVRVQGETSAAEVANAIRGFNAMARMPDLLIVARGGGSLEDLWGFNEEIVVRAVAASTIPLIAAVGHETDWTLIDHVADERAPTPTAAAERAVPVRADLLAQVASLAARHERGLKRLMTERRTRIRAAARALPRPDDILALARQRFDSVSGRLRSALVKNTLLHRRDFENAAARLTPVSLRRNLAEQTRLLTRHGATLRRDIRRVIELRGTRLTASGKLLTSLSYKSVLQRGYALVRSAEREPLSAAAQVKPGQELRIEFHDGEIEAQAHGHSSQ 459          
BLAST of mRNA_P-wetherbeei_contig14362.2.1 vs. uniprot
Match: A0A537NYD9_9PROT (Exodeoxyribonuclease 7 large subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NYD9_9PROT)

HSP 1 Score: 323 bits (828), Expect = 5.310e-105
Identity = 184/313 (58.79%), Postives = 220/313 (70.29%), Query Frame = 1
Query:    1 AVIRDILHRLSDRFPRHVLVWPVRVQGETSAAEVAAAIIGFNAMANPPDLIIVARGGGSLEDLWGFNEEIVVRAVAGSKIPIISAVGHETDTTLIDLVSDHRAPTPSAAAERAVPVRADLLAELASLNARQARSIARYFDERRTRLRSAARALPKPDEFLALVRQRFDTVAARLPQALRANVQHHRVDLAKISGRLSVRPIVQNQQELKRRLLDSNLRGNRAVSRVLQSFKDRLSAEAKLFAALNYTSVLARGFALVLDTKGQPIKQAAAVSPGQTLKIQFSDDTLTVQA-------------ARKTSQGELF 900
            AVIRDILHRLSDRFPRHV+VWPVRVQGETSAAEVAAAI GFNAMA  PDL+IVARGGGSLEDLW FNEEIVVRAVA S IP+ISAVGHETD TLID V+D RAPTP+AAAERAVPVRADL++++ASL AR  R + R   ERRTR+R+AARALP+PD+ LAL RQRFD ++ RL  AL  N   HR D    +GRL+  P+ +N  E  R L    +   R + R+++  +  L+   KL  +L+Y SVL RG+ALV   +  P+  AA V PGQ L+I+F D  +  QA              R+  QG LF
Sbjct:  163 AVIRDILHRLSDRFPRHVMVWPVRVQGETSAAEVAAAIRGFNAMALRPDLLIVARGGGSLEDLWSFNEEIVVRAVAESIIPLISAVGHETDWTLIDHVADERAPTPTAAAERAVPVRADLVSQIASLAARHNRGLRRLMAERRTRIRAAARALPRPDDILALARQRFDNISGRLRSALIKNTLLHRRDFEGAAGRLTPMPLRRNLAEQTRILARHGIELRRDLRRIIEQRRTNLAGCGKLLGSLSYKSVLQRGYALVRSHERIPLSSAAQVKPGQDLRIEFRDGEVAAQAHGGPSHSPTKTGKTREGGQGSLF 475          
BLAST of mRNA_P-wetherbeei_contig14362.2.1 vs. uniprot
Match: A0A3B0SMG7_9ZZZZ (Exodeoxyribonuclease VII large subunit n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0SMG7_9ZZZZ)

HSP 1 Score: 322 bits (826), Expect = 1.030e-104
Identity = 180/309 (58.25%), Postives = 220/309 (71.20%), Query Frame = 1
Query:    1 AVIRDILHRLSDRFPRHVLVWPVRVQGETSAAEVAAAIIGFNAMA--NPPDLIIVARGGGSLEDLWGFNEEIVVRAVAGSKIPIISAVGHETDTTLIDLVSDHRAPTPSAAAERAVPVRADLLAELASLNARQARSIARYFDERRTRLRSAARALPKPDEFLALVRQRFDTVAARLPQALRANVQHHRVDLAKISGRLSVRPIVQNQQELKRRLLDSNLRGNRAVSRVLQSFKDRLSAEAKLFAALNYTSVLARGFALVLDTKGQPIKQAAAVSPGQTLKIQFSD-------DTLTVQAARKTSQGELF 900
            AVIRDILHRL+DRFPRHVLVWPVRVQGETSA EVAA I GFNAM   N PDLIIVARGGGSLEDLWGFNEEIV RA A S IP+ISAVGHETD TLID ++D RAPTP+AAAERAVPVR DLLA +A L AR  R++ R   ER+TR++SAARALPKPD+ LAL RQR+DT + RL QAL+ N+Q HR    +++GR +++P+ Q  +  +  LL   L+  RAV R++   + RL+  AKL  + +Y SVLARGF+++ D  G+P+   A   PG  + I+  D       D   +  A K SQG L 
Sbjct:  166 AVIRDILHRLADRFPRHVLVWPVRVQGETSAKEVAAGIDGFNAMTDDNRPDLIIVARGGGSLEDLWGFNEEIVARAAATSDIPLISAVGHETDWTLIDYIADERAPTPTAAAERAVPVRRDLLAMVADLGARNPRALHRLMAERKTRVQSAARALPKPDDLLALARQRYDTASGRLTQALKTNLQSHRNTYERVAGRHTLQPLRQQIERHREALLRHGLQSARAVHRLVGEKRQRLTLAAKLNDSFSYKSVLARGFSVIKDENGKPVVSVADAKPGGRVSIEMQDGKVKATLDGKKLPVAAKESQGSLL 474          
BLAST of mRNA_P-wetherbeei_contig14362.2.1 vs. uniprot
Match: A0A7V2WME3_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7V2WME3_9HYPH)

HSP 1 Score: 322 bits (825), Expect = 1.420e-104
Identity = 176/284 (61.97%), Postives = 211/284 (74.30%), Query Frame = 1
Query:    1 AVIRDILHRLSDRFPRHVLVWPVRVQGETSAAEVAAAIIGFNAMA-NPPDLIIVARGGGSLEDLWGFNEEIVVRAVAGSKIPIISAVGHETDTTLIDLVSDHRAPTPSAAAERAVPVRADLLAELASLNARQARSIARYFDERRTRLRSAARALPKPDEFLALVRQRFDTVAARLPQALRANVQHHRVDLAKISGRLSVRPIVQNQQELKRRLLDSNLRGNRAVSRVLQSFKDRLSAEAKLFAALNYTSVLARGFALVLDTKGQPIKQAAAVSPGQTLKIQFSD 849
            AVIRDILHRL+DRFPRHVLVWPVRVQGETSA EVAA I GFNAM  N PDLIIVARGGGSLEDLWGFNEEIV RA A S IP+ISAVGHETD TLID ++D RAPTP+AAAERAVPVR DLLA +A L AR  R++ R   ER+TR++SAARALPKPD+ LAL RQRFDT   RL QAL+AN+Q HR    +I+GR +++P+ Q     +  L    L+  RA++R++   + RL+  AKL  + +Y S+LARGFA+V +  G PI   A  SPG  + I+  D
Sbjct:  166 AVIRDILHRLADRFPRHVLVWPVRVQGETSAKEVAAGINGFNAMGKNRPDLIIVARGGGSLEDLWGFNEEIVARAAAASDIPLISAVGHETDWTLIDYIADERAPTPTAAAERAVPVRRDLLAMIADLGARNPRALHRLMTERKTRVQSAARALPKPDDILALARQRFDTAQGRLTQALKANLQSHRNAYERIAGRHTLKPLSQQITRHRETLQRHGLQSARAINRLIDEKRHRLTLAAKLNNSFSYKSILARGFAVVRNEAGTPITSVADASPGSRISIELQD 449          
BLAST of mRNA_P-wetherbeei_contig14362.2.1 vs. uniprot
Match: A0A7Y2FUJ8_9HYPH (Exodeoxyribonuclease 7 large subunit n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2FUJ8_9HYPH)

HSP 1 Score: 314 bits (804), Expect = 3.320e-101
Identity = 185/322 (57.45%), Postives = 222/322 (68.94%), Query Frame = 1
Query:    1 AVIRDILHRLSDRFPRHVLVWPVRVQGETSAAEVAAAIIGFNAM----ANP-PDLIIVARGGGSLEDLWGFNEEIVVRAVAGSKIPIISAVGHETDTTLIDLVSDHRAPTPSAAAERAVPVRADLLAELASLNARQARSIARYFDERRTRLRSAARALPKPDEFLALVRQRFDTVAARLPQALRANVQHHRVDLAKISGRLSVRPIVQNQQELKRRLLDSNLRGNRAVSRVLQSFKDRLSAEAKLFAALNYTSVLARGFALVLDTKGQPIKQAAAVSPGQTLKIQFSDDTLTV-----------------QAARKTSQGELF 900
            AVIRDILHRLSDRFPRHVLVWPVRVQGE  A EVAA I GFNA+     NP PDLIIVARGGGSLEDLWGFNEEIVVRA A S+IP+ISAVGHETD TLID  +D RAPTP+AAAERAVPVRADLLA++A   ARQAR++ R  DER+TR+ +AARALP+PD+ LAL RQRFD  A RL QALRAN+   R    +++GRLS+RP+V      +  L   +L+  RAV R  Q+    L+A  KL A+L+Y SV+ RGFA+  D  G  +  A A      L +QF DD++                   ++A  +SQG+LF
Sbjct:  168 AVIRDILHRLSDRFPRHVLVWPVRVQGEKCAQEVAAGINGFNALPDDSGNPRPDLIIVARGGGSLEDLWGFNEEIVVRAAAASEIPLISAVGHETDWTLIDYAADWRAPTPTAAAERAVPVRADLLAQVADHGARQARAVRRAMDERQTRITAAARALPRPDDVLALARQRFDGAAGRLTQALRANLNVQRGGYERVTGRLSIRPLVSQIISHRDALERHHLQATRAVRRNCQTKATSLAASKKLLASLSYESVVQRGFAVARDGNGALLDTAKAARKAGHLSLQFRDDSVGATIDDAAPAKPKARPTRGKSAPGSSQGDLF 489          
BLAST of mRNA_P-wetherbeei_contig14362.2.1 vs. uniprot
Match: A0A7S8C7N9_9HYPH (Exodeoxyribonuclease 7 large subunit n=2 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8C7N9_9HYPH)

HSP 1 Score: 309 bits (791), Expect = 7.310e-99
Identity = 174/322 (54.04%), Postives = 223/322 (69.25%), Query Frame = 1
Query:    1 AVIRDILHRLSDRFPRHVLVWPVRVQGETSAAEVAAAIIGFNAMANP-----PDLIIVARGGGSLEDLWGFNEEIVVRAVAGSKIPIISAVGHETDTTLIDLVSDHRAPTPSAAAERAVPVRADLLAELASLNARQARSIARYFDERRTRLRSAARALPKPDEFLALVRQRFDTVAARLPQALRANVQHHRVDLAKISGRLSVRP---IVQNQQEL-----------------------KRRLLDSNLRGNRAVSRVLQSFKDRLSAEAKLFAALNYTSVLARGFALVLDTKGQPIKQAAAVSPGQTLKIQFSDDTLTVQAA 873
            AVIRDI+HRL+DRFPR V+VWPVRVQGE+ A EV+AAI GFNA+A       PD++IVARGGGS+EDLWGFNEE VVRA A S IP+ISAVGHETD TLID V+D RAPTP+AAAERAVPVR +LLA +A L AR+ R+++R F+ERRTR+RSAAR LP+P++ L L RQRFDT + RL +AL+AN QHHR    + + RL+ R    +++ Q+E                        +RRL + + RG RA+ R L     +L  +AKL  +L+Y SVL RGFALV D  G+P+++A   SPG  L+I+F D  +  + A
Sbjct:  167 AVIRDIMHRLADRFPRRVIVWPVRVQGESCAGEVSAAIRGFNALAPDGAIPRPDVLIVARGGGSIEDLWGFNEEEVVRAAAASDIPLISAVGHETDWTLIDYVADERAPTPTAAAERAVPVRGELLATVADLGARERRALSRLFEERRTRVRSAARGLPRPEDILGLARQRFDTASGRLGRALKANTQHHRTRWVQATARLTPRTFTSLIERQRERLETRSHRLARGLAVSARQVIVEGRRRLGELDGRGGRAMRRRLNDVGRQLDGQAKLLESLSYRSVLGRGFALVRDGTGRPVRRAGETSPGADLEIEFQDGRVAARIA 488          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14362.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001FEF79D95.880e-11562.67exodeoxyribonuclease VII large subunit n=1 Tax=Aes... [more]
UPI0019BF8BC94.050e-11361.67Exodeoxyribonuclease VII large subunit n=1 Tax=Hyp... [more]
A0A7V2SND1_9HYPH2.610e-10759.22Exodeoxyribonuclease 7 large subunit n=1 Tax=Hypho... [more]
A0A2W2AS93_9HYPH4.300e-10762.76Exodeoxyribonuclease 7 large subunit n=1 Tax=Aestu... [more]
A0A6G6WY12_9HYPH1.170e-10661.82Exodeoxyribonuclease 7 large subunit n=2 Tax=Hypho... [more]
A0A537NYD9_9PROT5.310e-10558.79Exodeoxyribonuclease 7 large subunit n=1 Tax=Alpha... [more]
A0A3B0SMG7_9ZZZZ1.030e-10458.25Exodeoxyribonuclease VII large subunit n=1 Tax=hyd... [more]
A0A7V2WME3_9HYPH1.420e-10461.97Exodeoxyribonuclease 7 large subunit n=1 Tax=Hypho... [more]
A0A7Y2FUJ8_9HYPH3.320e-10157.45Exodeoxyribonuclease 7 large subunit n=1 Tax=Hypho... [more]
A0A7S8C7N9_9HYPH7.310e-9954.04Exodeoxyribonuclease 7 large subunit n=2 Tax=Kaust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14362contigP-wetherbeei_contig14362:820..1722 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog504832.OCAR_7248
Preferred namexseA
PFAMsExonuc_VII_L,tRNA_anti_2
Model size903
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03601
KEGG Pathwayko03430,map03430
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.33e-87
EggNOG OGsCOG1570@1|root,COG1570@2|Bacteria,1MUA4@1224|Proteobacteria,2TR1R@28211|Alphaproteobacteria,3JR19@41294|Bradyrhizobiaceae
EC3.1.11.6
DescriptionBidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
Cds size903
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186019.4302514-CDS-P-wetherbeei_contig14362:819..17221683186019.4302514-CDS-P-wetherbeei_contig14362:819..1722Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14362 820..1722 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14362.2.1prot_P-wetherbeei_contig14362.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14362 820..1722 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14362.2.1

>prot_P-wetherbeei_contig14362.2.1 ID=prot_P-wetherbeei_contig14362.2.1|Name=mRNA_P-wetherbeei_contig14362.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=301bp
AVIRDILHRLSDRFPRHVLVWPVRVQGETSAAEVAAAIIGFNAMANPPDL
IIVARGGGSLEDLWGFNEEIVVRAVAGSKIPIISAVGHETDTTLIDLVSD
HRAPTPSAAAERAVPVRADLLAELASLNARQARSIARYFDERRTRLRSAA
RALPKPDEFLALVRQRFDTVAARLPQALRANVQHHRVDLAKISGRLSVRP
IVQNQQELKRRLLDSNLRGNRAVSRVLQSFKDRLSAEAKLFAALNYTSVL
ARGFALVLDTKGQPIKQAAAVSPGQTLKIQFSDDTLTVQAARKTSQGELF
*
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mRNA from alignment at P-wetherbeei_contig14362:820..1722-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14362.2.1 ID=mRNA_P-wetherbeei_contig14362.2.1|Name=mRNA_P-wetherbeei_contig14362.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=903bp|location=Sequence derived from alignment at P-wetherbeei_contig14362:820..1722- (Phaeothamnion wetherbeei SAG_119_79)
GCTGTCATCCGCGATATCCTGCATCGCCTGAGCGACCGTTTCCCCCGCCA TGTGCTCGTCTGGCCGGTGCGGGTGCAGGGTGAAACCTCGGCAGCGGAAG TGGCCGCTGCGATCATCGGCTTCAACGCCATGGCAAATCCCCCTGACCTG ATCATCGTGGCGCGCGGCGGCGGTTCGCTGGAAGACCTCTGGGGCTTCAA CGAGGAAATTGTCGTGCGCGCCGTGGCGGGTAGCAAGATTCCCATCATCT CCGCCGTGGGTCATGAAACCGATACGACGCTGATTGATCTCGTGTCCGAT CACCGGGCGCCCACGCCATCAGCCGCCGCCGAGCGCGCCGTCCCGGTGCG CGCCGATCTGCTGGCTGAACTGGCCTCGCTCAATGCCCGGCAAGCCAGAA GTATCGCCCGCTATTTCGATGAGCGCCGCACCCGCCTTCGCTCCGCCGCC CGCGCCTTGCCAAAGCCCGATGAATTCCTGGCCCTCGTGCGCCAGCGCTT TGATACGGTGGCAGCGCGGTTGCCCCAAGCCTTGCGCGCCAATGTGCAGC ATCACCGGGTGGACCTGGCAAAAATTTCCGGCAGGCTTTCCGTGCGGCCC ATTGTCCAGAACCAGCAAGAGTTGAAGCGCCGTCTGCTTGATTCAAACCT TCGCGGCAATCGTGCTGTGTCCCGCGTGCTGCAATCCTTCAAGGACCGGC TTTCCGCCGAAGCAAAACTCTTCGCGGCATTGAACTACACCTCGGTTCTG GCCCGCGGCTTTGCCCTGGTGCTCGACACCAAAGGCCAGCCCATCAAACA GGCCGCAGCGGTCAGCCCCGGTCAAACCTTGAAAATTCAGTTCAGTGATG ACACATTGACGGTTCAGGCCGCCCGGAAGACCTCCCAGGGCGAACTTTTT TGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14362:820..1722-

>mRNA_P-wetherbeei_contig14362.2.1 ID=mRNA_P-wetherbeei_contig14362.2.1|Name=mRNA_P-wetherbeei_contig14362.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=903bp|location=Sequence derived from alignment at P-wetherbeei_contig14362:820..1722- (Phaeothamnion wetherbeei SAG_119_79)
GCTGTCATCCGCGATATCCTGCATCGCCTGAGCGACCGTTTCCCCCGCCA
TGTGCTCGTCTGGCCGGTGCGGGTGCAGGGTGAAACCTCGGCAGCGGAAG
TGGCCGCTGCGATCATCGGCTTCAACGCCATGGCAAATCCCCCTGACCTG
ATCATCGTGGCGCGCGGCGGCGGTTCGCTGGAAGACCTCTGGGGCTTCAA
CGAGGAAATTGTCGTGCGCGCCGTGGCGGGTAGCAAGATTCCCATCATCT
CCGCCGTGGGTCATGAAACCGATACGACGCTGATTGATCTCGTGTCCGAT
CACCGGGCGCCCACGCCATCAGCCGCCGCCGAGCGCGCCGTCCCGGTGCG
CGCCGATCTGCTGGCTGAACTGGCCTCGCTCAATGCCCGGCAAGCCAGAA
GTATCGCCCGCTATTTCGATGAGCGCCGCACCCGCCTTCGCTCCGCCGCC
CGCGCCTTGCCAAAGCCCGATGAATTCCTGGCCCTCGTGCGCCAGCGCTT
TGATACGGTGGCAGCGCGGTTGCCCCAAGCCTTGCGCGCCAATGTGCAGC
ATCACCGGGTGGACCTGGCAAAAATTTCCGGCAGGCTTTCCGTGCGGCCC
ATTGTCCAGAACCAGCAAGAGTTGAAGCGCCGTCTGCTTGATTCAAACCT
TCGCGGCAATCGTGCTGTGTCCCGCGTGCTGCAATCCTTCAAGGACCGGC
TTTCCGCCGAAGCAAAACTCTTCGCGGCATTGAACTACACCTCGGTTCTG
GCCCGCGGCTTTGCCCTGGTGCTCGACACCAAAGGCCAGCCCATCAAACA
GGCCGCAGCGGTCAGCCCCGGTCAAACCTTGAAAATTCAGTTCAGTGATG
ACACATTGACGGTTCAGGCCGCCCGGAAGACCTCCCAGGGCGAACTTTTT
TGA
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