mRNA_P-wetherbeei_contig1432.3.5 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A835YMG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG4_9STRA) HSP 1 Score: 301 bits (771), Expect = 2.290e-97 Identity = 160/295 (54.24%), Postives = 189/295 (64.07%), Query Frame = 3
Query: 417 RPTRVVTDVDDTIKSSGNLRLFN-LPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGAVPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDI 1298
R RVVTD+DDT+KSSGNLRL +PLGGIDAQY RG+FYPGVFQFGLELA H PR MPL +AVLTARA+E LFAL+LD HPVSVAY +CG NG++GWGLGP+LYGSVKEWIC RK+ RK++NF ++ D A+ RG +YVFIGDTGEGD AG MC + P ++R +F H V C +P D VNGVPVLFF+TYVGAA KA GLL+ + RVIA A +LE +G PRT+SKW DLE DI
Sbjct: 1 RLLRVVTDIDDTVKSSGNLRLAGVIPLGGIDAQYERGQFYPGVFQFGLELAAHGVPRGLMPLPIAVLTARAKELLFALELDMEHPVSVAYRQCGAENGMEGWGLGPILYGSVKEWICWTRKSRRKVKNFRRLMELDGRNAIARG--------------------------------------YMTEYVFIGDTGEGDFKAGIKMCENFPRELRALFLHMVYCVDD-VCKVPEDYAVNGVPVLFFKTYVGAARKAYEAGLLNRYAVERVIAKAVEELEYSGAPRTSSKWSDLEADI 256
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A835YPL0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPL0_9STRA) HSP 1 Score: 292 bits (748), Expect = 2.180e-93 Identity = 155/294 (52.72%), Postives = 182/294 (61.90%), Query Frame = 3
Query: 429 VVTDVDDTIKSSGNLRLFNL-PLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGAVPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIADA 1307
VVTD+DDT+KSSGNLRL L PLGGIDAQY RG+FYPGVFQF LELA H P+ +PL VAVLTARA+EFLFAL+L HPVS+AY +CG NG DGWGLGPVLYGSVKEWI RK RK +NF ++ D A RG Y+FIGDTGEGD AG MC P ++R +F HAVSC+ + P D +NGVPVLFF+TYVGAA KA GL+D G++RVI + +LE +G PR SKW D+E DI A
Sbjct: 38 VVTDIDDTVKSSGNLRLAGLIPLGGIDAQYERGQFYPGVFQFALELAAHGTPQGLLPLPVAVLTARAKEFLFALELKTEHPVSIAYRQCGTDNGFDGWGLGPVLYGSVKEWIVWTRKGRRKFKNFKRLMEIDGTHAAARG--------------------------------------CATDYIFIGDTGEGDTKAGVKMCETFPRELRAMFMHAVSCDSEYCIT-PDDYTINGVPVLFFKTYVGAARKAYEAGLMDKAGVQRVIDRSVMELELSGAPRDCSKWEDMEMDIEQA 292
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: D7G7V3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V3_ECTSI) HSP 1 Score: 281 bits (719), Expect = 1.600e-87 Identity = 151/292 (51.71%), Postives = 182/292 (62.33%), Query Frame = 3
Query: 426 RVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGG-GAVPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDI 1298
RVVTD+DDT+KSSGN RLF +PLGGIDAQY RG FYPGVFQF LEL+R+R P + PL VAVLTARAREFLFAL++ H ++ + +CG NG+ WG GPVLYGSVKEW+C RK+ RK NF +L D GG G+ +G Y+FIGDTGEGD AG+ M +HP MR VF H VS G VP+P D +VN VPV++FRTYVGAAVKA LGL+D GL VI AA+ + VPR +SKW D+ RD+
Sbjct: 97 RVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYRVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVCPSRKSERKARNFGFLLEDDEK------------------------------------GGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAEHPDRMRAVFLHVVSDGPQQGKVPVPMDRVVNAVPVVYFRTYVGAAVKAVELGLMDKKGLENVITAAKEAMTK--VPRQSSKWEDINRDL 350
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A6V2PZW2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PZW2_9STRA) HSP 1 Score: 239 bits (609), Expect = 4.930e-72 Identity = 134/310 (43.23%), Postives = 178/310 (57.42%), Query Frame = 3
Query: 423 TRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRC-------------PRDRM-PLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGAVP-LPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIADA 1307
T+V++DVDDT+KSSG + + + LGGID QY RG+FYPGVFQF LEL+ H+ DR+ P +VAVLTARA EF AL+L G ++ A+ + G G++ WGLGPVLYGSV EW+ +RK +RK NF ++ D ++ QYV++GDTGE D AG+ M R++P ++ VF H VS P +PP L+NG P++FFRTYVGAA KA +LGL+ + GL RVI A A LE GVPR+ KW+DLERDI++A
Sbjct: 61 TQVISDVDDTLKSSGGVNVAGVALGGIDVQYERGDFYPGVFQFMLELSMHKLGEGPNESEGDDTGEEDRLYPPKVAVLTARAEEFKVALELKGNSKLAKAFRKTGEKAGIEDWGLGPVLYGSVAEWVIQDRKGLRKFSNFERLIEQDPTGTIM-------------------------------------------QYVYVGDTGELDQEAGETMLREYPEVVKAVFLHVVS---DAPFPRIPPPKLINGRPIVFFRTYVGAAAKAVQLGLMYEEGLMRVIVEAEAALE--GVPRSNEKWLDLERDISEA 322
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: W7UBU9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBU9_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.430e-70 Identity = 128/279 (45.88%), Postives = 160/279 (57.35%), Query Frame = 3
Query: 417 RPTRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGAVPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAG 1253
R +V+TD+DDT+KSSG LRL + LGGID QY RG++YPG FQF LEL+R P R P RVAVLTARAREF FAL+L +H V Y G +NGV+GWG+G VLYGSVKEW+C RK +RK NF + DR R YVF+GDTGE DL AG++M R +P+ ++ +F H VS + P P D + VPV++FRTYVGAAVKAA LGLL G+ V+A ++E G
Sbjct: 104 RILQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRLD--------------------------------------------RTDYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVS-ESRPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEIEGGG 337
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A7S2IAS8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IAS8_9STRA) HSP 1 Score: 234 bits (596), Expect = 5.960e-70 Identity = 134/313 (42.81%), Postives = 177/313 (56.55%), Query Frame = 3
Query: 414 WRP-TRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDR-------------MPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGAVP-LPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIADA 1307
+RP T+V++DVDDT+KSSG + + + LGGID QY+RGEFYPGVFQF LEL+ D P +VAVLTARA EF AL+L G ++ A+ + G G+D WGLGPVLYGSV EW+ +RK +RK NF ++ D ++ QYV++GDTGE D AG+ M R++P ++ VF H VS P +PP L+NG PV+FFRTYVGAA +A +LGL+ + GL RVI A A L+ GVP + KW+DLERDI++A
Sbjct: 69 YRPYTQVISDVDDTLKSSGGVTVAGVALGGIDIQYTRGEFYPGVFQFMLELSMPTLDNDDDENDTENEKSQFLYPPKVAVLTARAEEFKVALELKGNSKLAKAFRKTGEKAGIDDWGLGPVLYGSVAEWVIQDRKGMRKFSNFERLIEQDPTGTIM-------------------------------------------QYVYVGDTGELDQEAGETMLREYPEVVKAVFLHVVS---DAPFPRVPPPKLINGRPVVFFRTYVGAAARAVQLGLMQEEGLMRVIVEAEAALK--GVPTSNEKWLDLERDISEA 333
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A7S4CYL7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CYL7_9EUGL) HSP 1 Score: 237 bits (604), Expect = 2.030e-69 Identity = 137/298 (45.97%), Postives = 175/298 (58.72%), Query Frame = 3
Query: 420 PTRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGA-VPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTA---SKWVDLERDIA 1301
P +V+TD+DDT+KSSG ++ +PLGGID QY RG FYPGVF+F LELA + PL VAVLTARAREFLFAL+LD +H + A+ GR++G + WG+G VLYGSV+EW+C RK+ RK+ENF +L + A R +VF+GDTGE D AG+ M + P+ M+ +F H V+ + PLP D L+NG PV+FFRTYVGAA KA + GLL GL V+ AARADLE P +A S+W DL RDIA
Sbjct: 214 PLQVITDIDDTVKSSGGVKFGGIPLGGIDTQYRRGLFYPGVFRFMLELASY--ATTEAPLSVAVLTARAREFLFALELDESHAICKAFRDTGRASGHEDWGIGEVLYGSVQEWVCQGRKSWRKVENFKLLLSSLPPDAARR-------------------------------------------FVFVGDTGELDQEAGEIMLEEFPSCMQALFLHVVAPDPALVPAPLPRDKLINGAPVVFFRTYVGAARKAVKYGLLGVDGLAAVVEAARADLERIE-PESAGGSSRWADLNRDIA 465
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A7S3A3W7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3W7_9RHOD) HSP 1 Score: 231 bits (588), Expect = 2.270e-68 Identity = 134/306 (43.79%), Postives = 175/306 (57.19%), Query Frame = 3
Query: 396 RRPQTGWRPTR--VVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAV-SCNGGGAVPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIAD 1304
+ P +P R V+TD+DDT+KSSG LR+ LGGID+QY RG+ YPGVFQF LE+A P D PL +AVLTARARE FAL L+ HP+ Y CG G D WG+GPVLYGSVKEW+ +K +RK NF ++L A S+ GVG G + +Y+++GDTGE DL AG+ M + +P++M+ VF H V + A+ D+ V VPVLFFRTYVGAA KA G++ + +RRV A A +L ++SKWVDL +DI D
Sbjct: 92 KEPPAPSKPERIQVITDIDDTVKSSGGLRVAGQYLGGIDSQYKRGDCYPGVFQFALEIATSGLPEDVEPLPMAVLTARARELKFALALEEHHPICRKYRYCGMERGFDDWGIGPVLYGSVKEWLFQSKKGVRKFRNF-QLLHNYNA----------------------------------SNCGVG--IGCQTKYIYVGDTGELDLHAGKLMLQKYPSEMKAVFLHVVYNERDDPALKSYEDTHVKNVPVLFFRTYVGAARKAVEHGIISEAAMRRVAAKALKELLRIEPDHSSSKWVDLRKDIKD 360
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: B8C091_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C091_THAPS) HSP 1 Score: 222 bits (566), Expect = 2.010e-65 Identity = 127/322 (39.44%), Postives = 175/322 (54.35%), Query Frame = 3
Query: 423 TRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRM-------------------PLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGV---DGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGA-----VPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIADA 1307
T+VV+D+DDT+KSSG + + + LGGID QY+RGEFYPGVFQF EL+ + ++ P +VAVLTARA EF AL++ ++ A+ + G S+ V WG+GPVLYGSV EWI +K +RK NF +L D ++ QY+++GDTGE D AG+ M R++P ++ VF H VS + A +P+PP L+NG P++FFRTYVGAA KA +LGL++ GL RV+ A +LE GVP+ KW+DLERDI +A
Sbjct: 60 TQVVSDIDDTLKSSGGVTIAGVSLGGIDVQYARGEFYPGVFQFMWELSLYSITLNQQYYDDFTSEEDDSSLLQGLTPPKVAVLTARAEEFKAALEIKDESKLAQAFLKTGESSEVCPTKNWGVGPVLYGSVNEWIVQYKKGLRKFNNFERLLEQDPTGRIL-------------------------------------------QYIYVGDTGELDQEAGETMLREYPEVVQAVFLHVVSFDSPSAYPSSGLPIPPSKLINGRPLVFFRTYVGAAAKATQLGLMEGDGLMRVMEKAEKELEERGVPKDDVKWIDLERDIYEA 338
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A7S0UKK8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKK8_9STRA) HSP 1 Score: 221 bits (562), Expect = 2.600e-65 Identity = 119/297 (40.07%), Postives = 165/297 (55.56%), Query Frame = 3
Query: 417 RPTRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGAVPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIADA 1307
R T+V++DVDDT+KSSG + + + LGGID QY RG+FYPGV +F L L++ + P +A+LTARA EF AL++ ++VA G G++GWG+GPVLYGSV EWI +RK +RK NF ++ D + QY+++GDTGE D AG+ M R++P M+ VF H V+ + G +PP L+NG PV+FFRTYVGAA+ A +LGL+ GL+ VI AA L VP + KW D+ +D+A A
Sbjct: 52 RFTQVISDVDDTLKSSGGVSVGGVALGGIDVQYDRGDFYPGVGEFMLALSQCGLTEEVNPANIAILTARAEEFKAALEIKEGSKLAVALRSAGEKVGINGWGVGPVLYGSVAEWIAQDRKGLRKFTNFERLIEQDPTGTIF-------------------------------------------QYIYVGDTGELDQEAGETMLREYPEVMKAVFLHVVTDDVEGPPLIPPPKLINGHPVIFFRTYVGAAIDAVQLGLMSLDGLQSVIEAATEKLS--DVPENSDKWKDIRKDMARA 303 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1432.3.5 >prot_P-wetherbeei_contig1432.3.5 ID=prot_P-wetherbeei_contig1432.3.5|Name=mRNA_P-wetherbeei_contig1432.3.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=351bp MVTARRCAVLMAAASRHGSILPIASASFTRFSKLAAASSASSPQLLRRPQback to top mRNA from alignment at P-wetherbeei_contig1432:1470..3600- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1432.3.5 ID=mRNA_P-wetherbeei_contig1432.3.5|Name=mRNA_P-wetherbeei_contig1432.3.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2131bp|location=Sequence derived from alignment at P-wetherbeei_contig1432:1470..3600- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1432:1470..3600- >mRNA_P-wetherbeei_contig1432.3.5 ID=mRNA_P-wetherbeei_contig1432.3.5|Name=mRNA_P-wetherbeei_contig1432.3.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig1432:1470..3600- (Phaeothamnion wetherbeei SAG_119_79)back to top |