mRNA_P-wetherbeei_contig14269.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14269.2.1 vs. uniprot
Match: D7FPX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX3_ECTSI) HSP 1 Score: 122 bits (305), Expect = 7.280e-30 Identity = 59/120 (49.17%), Postives = 80/120 (66.67%), Query Frame = 1
Query: 1 MQEAIVLQRPFVIGFTGTSVTAGHDNLFEESYPRVVHSQLGRIFAATGVAFEGRNGAMGNNPPAPYEFCLSRFAGADPDIVSWEMNMMVAGHQC--PGADVEAFVRTALALPSQPAVLVL 354
M A+V Q F+ FTG S TAGHD LFE+SYP +++ GR+ AATGV FE N AMGN APY +C+ AG + D++SW+M +MVA ++C A +E FVR+A LP +P VL++
Sbjct: 212 MLNAVVEQEGFLAAFTGVSTTAGHDCLFEQSYPVLLNETFGRLMAATGVKFEAINVAMGNTRVAPYSYCVEAHAGLEADLISWDMTLMVASNECGKAAAGIELFVRSATVLPKRPVVLLM 331
BLAST of mRNA_P-wetherbeei_contig14269.2.1 vs. uniprot
Match: A0A835YN73_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN73_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.500e-26 Identity = 58/118 (49.15%), Postives = 72/118 (61.02%), Query Frame = 1
Query: 7 EAIVLQRPFVIGFTGTSVTAGHDNLFEESYPRVVHSQLGRIFAATGVAFEGRNGAMGNNPPAPYEFCLSRFAGADPDIVSWEMNMMVAGHQCPGAD--VEAFVRTALALPSQPAVLVL 354
A+V QR F + FTG S TAGHDNLF +SYP V+ L + GV NGAMGN PY +C+ AGA PD+VSWEM+M + C VE ++RTALALPS+P L+L
Sbjct: 22 RAVVGQRNFTMAFTGISNTAGHDNLFAQSYPMVLERLLKPVLQLAGVELRVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMSMQIGNTPCTRTAELVETWIRTALALPSRPVPLLL 139
BLAST of mRNA_P-wetherbeei_contig14269.2.1 vs. uniprot
Match: W7TU63_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU63_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.090e-22 Identity = 53/108 (49.07%), Postives = 68/108 (62.96%), Query Frame = 1
Query: 31 FVIGFTGTSVTAGHDNLFEESYPRVVHSQLGRIFAATGVAFEGRNGAMGNNPPAPYEFCLSRFAGADPDIVSWEMNMMVAGHQCPGADVEAFVRTALALPSQPAVLVL 354
F++ F GTSVTAGHDN F +SYP V+ L + A G+ E RN AMGNNP P FC+ G D D+ +WE MMV+G A VE ++R AL LP +PA+L+L
Sbjct: 207 FIMSFAGTSVTAGHDNYFNQSYPIVLERLLLDSYTAAGLNLEVRNHAMGNNPAIPAAFCVRSQLGEDTDVAAWEFEMMVSG-PLKNAYVEEWMRNALYLPKRPALLML 313
BLAST of mRNA_P-wetherbeei_contig14269.2.1 vs. uniprot
Match: A0A482UZ09_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UZ09_9ARCH) HSP 1 Score: 95.9 bits (237), Expect = 1.840e-22 Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 31 FVIGFTGTSVTAGHDNLFEESYPRVVHSQLGRIFAATGVAFEGRNGAMGNNPPAPYEFCLSRFAGADPDIVSWEMNMMVAGHQCPGADVEAFVRTALALPSQPAV 345
FVI FTG+SVTAGHD+++ + V + AA G+ FE RN A+GNNP PY+ C+ F G D D+ WE N C GA +E F+R A+ +P+QP V
Sbjct: 73 FVISFTGSSVTAGHDSMYNLTTTPNVQRLMQEPLAAAGLEFESRNVALGNNPCIPYDVCVKFFVGLDADVAVWEQNYF-----CSGAPLEIFIRQAMTIPTQPIV 172
BLAST of mRNA_P-wetherbeei_contig14269.2.1 vs. uniprot
Match: A0A4D9CSM2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSM2_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 6.190e-21 Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = 1
Query: 31 FVIGFTGTSVTAGHDNLFEESYPRVVHSQLGRIFAATGVAFEGRNGAMGNNPPAPYEFCLSRFAGADPDIVSWEMNMMVAGHQCPGADVEAFVRTALALPSQPAVLVL 354
F++ F GTSVTAGHDN F ESYP V+ L + A G+ E RN AMG NP P FC+ G D D+ +WE M ++G A VE ++R AL LP +PA+L+L
Sbjct: 199 FIMSFAGTSVTAGHDNYFNESYPIVLERLLLDSYTAAGLNLEVRNHAMGFNPAIPAAFCVRSQLGEDTDVAAWEFEMSISG-PLKNAYVEEWMRNALYLPKRPALLML 305
BLAST of mRNA_P-wetherbeei_contig14269.2.1 vs. uniprot
Match: A0A836CGX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGX8_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 6.240e-20 Identity = 44/80 (55.00%), Postives = 49/80 (61.25%), Query Frame = 1
Query: 1 MQEAIVLQRPFVIGFTGTSVTAGHDNLFEESYPRVVHSQLGRIFAATGVAFEGRNGAMGNNPPAPYEFCLSRFAGADPDI 240
M AIV QR F + FTGTSVTAGHDNL +SYP S + IF +GV F N AMGNN PY +CL G DPDI
Sbjct: 12 MLGAIVYQRSFRVAFTGTSVTAGHDNLESQSYPMQFESIMAPIFEHSGVNFTATNSAMGNNDIVPYLWCLEAHVGIDPDI 91
BLAST of mRNA_P-wetherbeei_contig14269.2.1 vs. uniprot
Match: A0A7S0SUH9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUH9_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.740e-19 Identity = 44/108 (40.74%), Postives = 63/108 (58.33%), Query Frame = 1
Query: 22 QRPFVIGFTGTSVTAGHDNLFEESYPRVVHSQLGRIFAATGVAFEGRNGAMGNNPPAPYEFCLSRFAGADPDIVSWEMNMMVAGHQCPG--ADVEAFVRTALALPSQP 339
Q+ F+I F G+SV AGHD+ F ESYP VV + + + RN A+GNNP PY+ C+ FAG D DI+ WE + + C + +E FVR A+ +P++P
Sbjct: 3 QKDFIISFLGSSVAAGHDSYFNESYPIVVGDIMKETLSKLNINLITRNVALGNNPCTPYDMCVRIFAGMDADIIHWEQS-----YNCNSDPSIMEQFVRQAMIIPTKP 105
BLAST of mRNA_P-wetherbeei_contig14269.2.1 vs. uniprot
Match: A0A448ZNB4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNB4_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.160e-15 Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 1 MQEAIVLQRPFVIGFTGTSVTAGHDNLFEESYPRVVHSQL-GRIFAATGVAFEGRNGAMGNNPPAPYEFCLSRFAGADPDIVSWEMNMMVAGHQCPGADV-EAFVRTALA-LPSQPAVLVL 354
+ EA QRPFV+ F+G S+T G N +++S+P V L G + + RN A+G P PY FC+ F G+DPD++SW+ +M + A V EAF+R A LP +P V+++
Sbjct: 126 IMEAARAQRPFVMAFSGYSITVGRGNFYKQSFPFVAEEILKGPMQELFNIPLVVRNAAIGGIPSFPYGFCMEHFLGSDPDVISWDYSM---NEKSKDASVFEAFLRQATKQLPKRPMVIMM 243
BLAST of mRNA_P-wetherbeei_contig14269.2.1 vs. uniprot
Match: A0A7S4AER8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AER8_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 5.500e-15 Identity = 44/121 (36.36%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 7 EAIVLQRPFVIGFTGTSVTAGHDNLFEESYP----RVVHSQLGRIFAATGVAFEGRNGAMGNNPPAPYEFCLSRFAGADPDIVSWEMNMMVAGHQCPGADVEAFVRTALA-LPSQPAVLVL 354
+A +RPFV+ F+G S+T G N + +S+P R++ + ++F V RN A+G P PY FCL F G+DPD++SW+ +M Q +EAF+R A LP +P V+++
Sbjct: 149 QASKAKRPFVMAFSGYSITVGRGNFYNQSFPFVTERILQEPMQKLFDIPIVV---RNAAIGGIPSFPYGFCLDHFLGSDPDVISWDYSMNEK--QMDAGVLEAFLRQATKQLPKRPMVIMM 264
BLAST of mRNA_P-wetherbeei_contig14269.2.1 vs. uniprot
Match: A0A7S4AEU8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AEU8_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.010e-14 Identity = 44/121 (36.36%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 7 EAIVLQRPFVIGFTGTSVTAGHDNLFEESYP----RVVHSQLGRIFAATGVAFEGRNGAMGNNPPAPYEFCLSRFAGADPDIVSWEMNMMVAGHQCPGADVEAFVRTALA-LPSQPAVLVL 354
+A +RPFV+ F+G S+T G N + +S+P R++ + ++F V RN A+G P PY FCL F G+DPD++SW+ +M Q +EAF+R A LP +P V+++
Sbjct: 149 QASKAKRPFVMAFSGYSITVGRGNFYNQSFPFVTERILQEPMQKLFDIPIVV---RNAAIGGIPSFPYGFCLDHFLGSDPDVISWDYSMNEK--QMDAGVLEAFLRQATKQLPKRPMVIMM 264 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14269.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14269.2.1 >prot_P-wetherbeei_contig14269.2.1 ID=prot_P-wetherbeei_contig14269.2.1|Name=mRNA_P-wetherbeei_contig14269.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp MQEAIVLQRPFVIGFTGTSVTAGHDNLFEESYPRVVHSQLGRIFAATGVAback to top mRNA from alignment at P-wetherbeei_contig14269:502..1530- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14269.2.1 ID=mRNA_P-wetherbeei_contig14269.2.1|Name=mRNA_P-wetherbeei_contig14269.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1029bp|location=Sequence derived from alignment at P-wetherbeei_contig14269:502..1530- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14269:502..1530- >mRNA_P-wetherbeei_contig14269.2.1 ID=mRNA_P-wetherbeei_contig14269.2.1|Name=mRNA_P-wetherbeei_contig14269.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig14269:502..1530- (Phaeothamnion wetherbeei SAG_119_79)back to top |