prot_P-wetherbeei_contig14264.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14264.2.1
Unique Nameprot_P-wetherbeei_contig14264.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length88
Homology
BLAST of mRNA_P-wetherbeei_contig14264.2.1 vs. uniprot
Match: D7FWM4_ECTSI (Structural maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWM4_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 3.600e-39
Identity = 71/88 (80.68%), Postives = 77/88 (87.50%), Query Frame = 0
Query:    1 VHSGGERSVSTILFLMALQDINKTSPFRVVDEINQGMDPNNERLVFSRIVRNSCGPGRPQYFLITPKLLQGLTAMEHEDVTVLTIFNG 88
            VHSGGERSVSTILFLMALQD+   SPFRVVDEINQGMDP NER VFSRIV NSCGP R QYFLITPKLLQGL AM+++D+TV+ I NG
Sbjct:  220 VHSGGERSVSTILFLMALQDLQH-SPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITVIVIMNG 306          
BLAST of mRNA_P-wetherbeei_contig14264.2.1 vs. uniprot
Match: A0A6H5JJB3_9PHAE (Structural maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJB3_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 4.400e-37
Identity = 70/88 (79.55%), Postives = 77/88 (87.50%), Query Frame = 0
Query:    1 VHSGGERSVSTILFLMALQDINKTSPFRVVDEINQGMDPNNERLVFSRIVRNSCGPGRPQYFLITPKLLQGLTAMEHEDVTVLTIFNG 88
            VHSGGERSVSTILFLMALQD+   SPFRVVDEINQGMDP NER VFSRIV NSCGP R QYFLITPKLLQGL AM+++D+T++ I NG
Sbjct: 1003 VHSGGERSVSTILFLMALQDLQH-SPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIMNG 1089          
BLAST of mRNA_P-wetherbeei_contig14264.2.1 vs. uniprot
Match: A0A7S2SUQ7_9STRA (Structural maintenance of chromosomes protein 5 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUQ7_9STRA)

HSP 1 Score: 137 bits (344), Expect = 8.600e-37
Identity = 69/86 (80.23%), Postives = 76/86 (88.37%), Query Frame = 0
Query:    3 SGGERSVSTILFLMALQDINKTSPFRVVDEINQGMDPNNERLVFSRIVRNSCGPGRPQYFLITPKLLQGLTAMEHEDVTVLTIFNG 88
            SGGERSVSTI++LMALQD+ + SPFRVVDEINQGMD  NER+VF RIV NS GP  PQYFLITPKLLQGLTAMEH+DVTVL +FNG
Sbjct:  300 SGGERSVSTIMYLMALQDMVR-SPFRVVDEINQGMDERNERIVFRRIVENSTGPESPQYFLITPKLLQGLTAMEHDDVTVLVVFNG 384          
BLAST of mRNA_P-wetherbeei_contig14264.2.1 vs. uniprot
Match: A0A7S3UTJ1_HETAK (Structural maintenance of chromosomes protein 5 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTJ1_HETAK)

HSP 1 Score: 128 bits (322), Expect = 2.620e-33
Identity = 65/88 (73.86%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    1 VHSGGERSVSTILFLMALQDINKTSPFRVVDEINQGMDPNNERLVFSRIVRNSCGPGRPQYFLITPKLLQGLTAMEHEDVTVLTIFNG 88
            V+SGGERSV+T+++LMALQD+  +SPFRVVDEINQGMD  NER+VFSRIVRN CG  RPQYFLITPKLLQGL AM+H DV    I NG
Sbjct:  353 VNSGGERSVATVIYLMALQDMI-SSPFRVVDEINQGMDERNERMVFSRIVRNCCGDRRPQYFLITPKLLQGLVAMDHPDVRAHVICNG 439          
BLAST of mRNA_P-wetherbeei_contig14264.2.1 vs. uniprot
Match: A0A835YKC8_9STRA (Structural maintenance of chromosomes protein 5 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC8_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.720e-33
Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = 0
Query:    1 VHSGGERSVSTILFLMALQDINKTSPFRVVDEINQGMDPNNERLVFSRIVRNSCGPGRPQYFLITPKLLQGLTAMEHEDVTVLTIFNG 88
            +HSGGERSVSTIL+LMA+QD+ ++SPFRVVDE+NQGMD +NERLVFSRIVRNSC     Q+FLITPKLLQGL AM++  VTV  I NG
Sbjct:  141 IHSGGERSVSTILYLMAMQDL-QSSPFRVVDEVNQGMDAHNERLVFSRIVRNSCRTDCKQFFLITPKLLQGLIAMDNPFVTVHFILNG 227          
BLAST of mRNA_P-wetherbeei_contig14264.2.1 vs. uniprot
Match: A0A7S2CV35_9STRA (Structural maintenance of chromosomes protein 5 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CV35_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.780e-33
Identity = 69/91 (75.82%), Postives = 73/91 (80.22%), Query Frame = 0
Query:    2 HSGGERSVSTILFLMALQDINKTSPFRVVDEINQGMDPNNERLVFSRIVRNSC----GPGRPQYFLITPKLLQGLTAMEHEDVTVLTIFNG 88
            HSGGERSV+TI+FLMALQD +  SPFRVVDEINQGMD  NER VF RIV NS     GP RPQYFLITPKLLQGLTAME EDVTV  + NG
Sbjct:  182 HSGGERSVATIMFLMALQD-SVISPFRVVDEINQGMDEPNERQVFKRIVENSIDKPNGPLRPQYFLITPKLLQGLTAMEKEDVTVHFVMNG 271          
BLAST of mRNA_P-wetherbeei_contig14264.2.1 vs. uniprot
Match: A0A7S3UTK1_HETAK (Structural maintenance of chromosomes protein 5 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTK1_HETAK)

HSP 1 Score: 128 bits (322), Expect = 1.200e-32
Identity = 65/88 (73.86%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    1 VHSGGERSVSTILFLMALQDINKTSPFRVVDEINQGMDPNNERLVFSRIVRNSCGPGRPQYFLITPKLLQGLTAMEHEDVTVLTIFNG 88
            V+SGGERSV+T+++LMALQD+  +SPFRVVDEINQGMD  NER+VFSRIVRN CG  RPQYFLITPKLLQGL AM+H DV    I NG
Sbjct:  664 VNSGGERSVATVIYLMALQDMI-SSPFRVVDEINQGMDERNERMVFSRIVRNCCGDRRPQYFLITPKLLQGLVAMDHPDVRAHVICNG 750          
BLAST of mRNA_P-wetherbeei_contig14264.2.1 vs. uniprot
Match: A0A7S2S1A1_9STRA (Structural maintenance of chromosomes protein 5 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S1A1_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.170e-32
Identity = 66/93 (70.97%), Postives = 70/93 (75.27%), Query Frame = 0
Query:    1 VHSGGERSVSTILFLMALQDINKTSPFRVVDEINQGMDPNNERLVFSRIVRNSCGPGRP-----QYFLITPKLLQGLTAMEHEDVTVLTIFNG 88
            VHSGGERSVSTI++LMALQDI   SPFR VDEINQG+D  NER VF RIV NS    +      QYFLITPKLL  LT MEHEDVTVL IFNG
Sbjct:   72 VHSGGERSVSTIMYLMALQDI-MVSPFRCVDEINQGLDERNERFVFKRIVLNSTSQNKSGDHSGQYFLITPKLLPNLTDMEHEDVTVLCIFNG 163          
BLAST of mRNA_P-wetherbeei_contig14264.2.1 vs. uniprot
Match: A0A7S0SSJ2_9STRA (Structural maintenance of chromosomes protein 5 (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSJ2_9STRA)

HSP 1 Score: 117 bits (294), Expect = 8.210e-32
Identity = 62/91 (68.13%), Postives = 73/91 (80.22%), Query Frame = 0
Query:    2 HSGGERSVSTILFLMALQDINKTSPFRVVDEINQGMDPNNERLVFSRIVRNSC--GPG--RPQYFLITPKLLQGLTAMEHEDVTVLTIFNG 88
            HSGGER+VSTI++LMALQD+   SPFRVVDEINQGMD  NERLV  RIV+N C   P    PQYFL+TPKLL GL ++E+++VTVL IFNG
Sbjct:   28 HSGGERAVSTIMYLMALQDMT-ASPFRVVDEINQGMDERNERLVLDRIVQNCCTISPSGYNPQYFLVTPKLLPGLRSLENDNVTVLVIFNG 117          
BLAST of mRNA_P-wetherbeei_contig14264.2.1 vs. uniprot
Match: A0A8J2SM90_9STRA (Structural maintenance of chromosomes protein 5 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SM90_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.500e-31
Identity = 65/88 (73.86%), Postives = 72/88 (81.82%), Query Frame = 0
Query:    1 VHSGGERSVSTILFLMALQDINKTSPFRVVDEINQGMDPNNERLVFSRIVRNSCGPGRPQYFLITPKLLQGLTAMEHEDVTVLTIFNG 88
            V SGGERSVSTI+FLMALQ  +  SPFRVVDEINQGMD  NER+VF R+V NS GPG PQY+LITPKLLQGL  MEH DV VL ++NG
Sbjct:  964 VQSGGERSVSTIMFLMALQ-AHLPSPFRVVDEINQGMDEVNERIVFRRVVLNSTGPGAPQYWLITPKLLQGLYDMEHPDVRVLVVYNG 1050          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14264.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWM4_ECTSI3.600e-3980.68Structural maintenance of chromosomes protein 5 n=... [more]
A0A6H5JJB3_9PHAE4.400e-3779.55Structural maintenance of chromosomes protein 5 n=... [more]
A0A7S2SUQ7_9STRA8.600e-3780.23Structural maintenance of chromosomes protein 5 n=... [more]
A0A7S3UTJ1_HETAK2.620e-3373.86Structural maintenance of chromosomes protein 5 n=... [more]
A0A835YKC8_9STRA3.720e-3372.73Structural maintenance of chromosomes protein 5 (F... [more]
A0A7S2CV35_9STRA3.780e-3375.82Structural maintenance of chromosomes protein 5 n=... [more]
A0A7S3UTK1_HETAK1.200e-3273.86Structural maintenance of chromosomes protein 5 n=... [more]
A0A7S2S1A1_9STRA3.170e-3270.97Structural maintenance of chromosomes protein 5 n=... [more]
A0A7S0SSJ2_9STRA8.210e-3268.13Structural maintenance of chromosomes protein 5 (F... [more]
A0A8J2SM90_9STRA1.500e-3173.86Structural maintenance of chromosomes protein 5 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..84
e-value: 9.1E-15
score: 56.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..66
IPR027131Structural maintenance of chromosomes protein 5PANTHERPTHR45916STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5coord: 2..88
NoneNo IPR availableCDDcd03277ABC_SMC5_eukcoord: 3..88
e-value: 5.29809E-48
score: 149.668

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14264contigP-wetherbeei_contig14264:762..1399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14264.2.1mRNA_P-wetherbeei_contig14264.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14264 762..1399 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14264.2.1 ID=prot_P-wetherbeei_contig14264.2.1|Name=mRNA_P-wetherbeei_contig14264.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=88bp
VHSGGERSVSTILFLMALQDINKTSPFRVVDEINQGMDPNNERLVFSRIV
RNSCGPGRPQYFLITPKLLQGLTAMEHEDVTVLTIFNG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR027131SMC5