mRNA_P-wetherbeei_contig14264.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14264.1.1 vs. uniprot
Match: B5Y5D5_PHATC (Structural maintenance of chromosomes protein 5 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5D5_PHATC) HSP 1 Score: 84.7 bits (208), Expect = 9.240e-17 Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 1
Query: 4 AIQQYEERKKEIAGVAAQLEALRQSKLTAQADLAQMQAAWEGALRPVVSKLDELFKKYMAQMNCGGSVHL-RSEVEDPGGDRDGQLLDFKDWGIEIRVRFREGTKLSVLNAQ 336
A++QYE K EI V +L+ L SK ++ W+ AL VSK+D+LF +YM +M C G + L R ++++ D + Q+ +FKDWGIEI V FREGTK +L+AQ
Sbjct: 876 ALRQYERTKAEIEEVQTKLDDLTSSKDAKLQEIRNKSNPWQAALENYVSKVDKLFSEYMQEMECTGEIRLKRGKIDE---DDENQIGNFKDWGIEILVSFREGTKAQILSAQ 984
BLAST of mRNA_P-wetherbeei_contig14264.1.1 vs. uniprot
Match: A0A7S3PDD4_9STRA (Structural maintenance of chromosomes protein 5 (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PDD4_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.490e-16 Identity = 45/111 (40.54%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 1 QAIQQYEERKKEIAGVAAQLEALRQSKLTAQADLAQMQAAWEGALRPVVSKLDELFKKYMAQMNCGGSVHLRSEVEDPGGDRDGQLLDFKDWGIEIRVRFREGTKLSVLNA 333
+A+Q+YE++KK+I ++ +LE + +K + + WE L V+K++ELF YMA+M+C G V LR + E+ G+ +G L F +WGIEIRV FR+G++L VL++
Sbjct: 26 EALQRYEDQKKKIDELSEKLEDAKSAKTGRMNSIKSRRRRWEATLDQTVAKINELFSGYMAEMDCAGEVVLR-KGEEGTGEYEG-LGSFAEWGIEIRVSFRQGSELQVLDS 134
BLAST of mRNA_P-wetherbeei_contig14264.1.1 vs. uniprot
Match: A0A7S1ZZ83_TRICV (Structural maintenance of chromosomes protein 5 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ83_TRICV) HSP 1 Score: 82.0 bits (201), Expect = 7.920e-16 Identity = 44/110 (40.00%), Postives = 72/110 (65.45%), Query Frame = 1
Query: 13 QYEERKKEIAGVAAQLEALRQSKLTAQADLAQMQAAWEGALRPVVSKLDELFKKYMAQMNCGGSVHLRS--EVEDPGGDRDGQLLDFKDWGIEIRVRFREGTKLSVLNAQ 336
QYE+RK+++A + +LE L +++ + L ++ WE AL + K++ LF +YMA++ C G V LR+ E E+ GD + +F +WGIEIRV+FR+ +KL VL+A+
Sbjct: 485 QYEKRKRQLAQIRDELENLNETQSNKRIQLETIKKNWEQALVNTIEKVNTLFAEYMAELGCAGEVSLRNGGEQENNRGDDNIPFYNFPEWGIEIRVKFRQESKLQVLSAR 594
BLAST of mRNA_P-wetherbeei_contig14264.1.1 vs. uniprot
Match: A0A7S2U763_9STRA (Structural maintenance of chromosomes protein 5 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U763_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 4.440e-15 Identity = 43/107 (40.19%), Postives = 64/107 (59.81%), Query Frame = 1
Query: 13 QYEERKKEIAGVAAQLEALRQSKLTAQADLAQMQAAWEGALRPVVSKLDELFKKYMAQMNCGGSVHLRSEVEDPGGDRDGQLLDFKDWGIEIRVRFREGTKLSVLNA 333
QYE+RK+EI +LE L ++ + +L +M+ WE AL+ V+K++ LF+KYM ++ G V L G D + F+DWGIEIRV+FRE + L L+A
Sbjct: 77 QYEQRKREIVETREELEGLSHAQDAKRVNLEKMKDPWESALKNTVTKVNTLFEKYMTELGFAGEVRLAKGEPISGEDGGEEESSFEDWGIEIRVKFREKSSLQTLSA 183
BLAST of mRNA_P-wetherbeei_contig14264.1.1 vs. uniprot
Match: A0A7S0CAC6_9STRA (Structural maintenance of chromosomes protein 5 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAC6_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.330e-14 Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = 1
Query: 7 IQQYEERKKEIAGVAAQLEALRQSKLTAQADLAQMQAAWEGALRPVVSKLDELFKKYMAQMNCGGSVHLRSEVEDPGGDRDGQLLDFKDWGIEIRVRFREGTKLSVLNAQ 336
+Q YE+RK EI +L L Q K +L + A WE AL V K++ LF KYM + C G + L++ +D DG DF++WG+EI V+FRE + L VL+A+
Sbjct: 126 LQAYEQRKLEIERTKKRLGGLEQEKNDKITELESILAPWEAALMNTVKKVNVLFSKYMKDLGCAGEIRLKTADDDNVNSEDG-YGDFREWGVEILVKFREKSSLQVLSAR 234
BLAST of mRNA_P-wetherbeei_contig14264.1.1 vs. uniprot
Match: A0A7S1DD08_CYCTE (Structural maintenance of chromosomes protein 5 n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DD08_CYCTE) HSP 1 Score: 77.4 bits (189), Expect = 1.480e-14 Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 1
Query: 4 AIQQYEERKKEIAGVAAQLEALRQSKLTAQADLAQMQAAWEGALRPVVSKLDELFKKYMAQMNCGGSVHLRSEVEDPGGDRDGQLL--DFKDWGIEIRVRFREGTKLSVLNAQ 336
AI+QYE+ +KEI +L + SK ++ QM+ WE AL VSK++ LF +YM ++ C G V LR + E +G+L +FK+WGIEI+V+FRE +K VL+AQ
Sbjct: 42 AIRQYEQLEKEIKETKDELSLMTDSKGAKAKEIEQMRDNWEKALEFSVSKVNALFSEYMRELGCAGQVVLR-KGEQLQATGEGELTCGNFKEWGIEIQVKFREKSKFEVLSAQ 153
BLAST of mRNA_P-wetherbeei_contig14264.1.1 vs. uniprot
Match: A0A7R9ZPN9_9STRA (Structural maintenance of chromosomes protein 5 (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZPN9_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 8.730e-13 Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 1
Query: 7 IQQYEERKKEIAGVAAQLEALRQSKLTAQADLAQMQAAWEGALRPVVSKLDELFKKYMAQMNCGGSVHLRSEVEDPGGDRDGQLLDFKDWGIEIRVRFREGTKLSVLNAQ 336
++QY ++ +I + Q+E ++ SK ++ + W+ AL+ V+K+D F +YM+++ C G V L D + +G FKDWGIEIRV FRE TK VL+A+
Sbjct: 24 VRQYLRQQVQIEEMDQQVEQMQLSKNDKVKEMQHKKGPWQAALKNSVNKIDTKFSQYMSELGCQGEVALTEGEADGEEEEEGS---FKDWGIEIRVSFRENTKPQVLSAR 130
BLAST of mRNA_P-wetherbeei_contig14264.1.1 vs. uniprot
Match: A0A7S1Y5K8_9STRA (Structural maintenance of chromosomes protein 5 n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y5K8_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.410e-12 Identity = 37/110 (33.64%), Postives = 63/110 (57.27%), Query Frame = 1
Query: 7 IQQYEERKKEIAGVAAQLEALRQSKLTAQADLAQMQAAWEGALRPVVSKLDELFKKYMAQMNCGGSVHLRSEVEDPGGDRDGQLLDFKDWGIEIRVRFREGTKLSVLNAQ 336
++QYE+ +K+I+ + +L+ K L + W+ AL+ K++ LF +YM ++ C G V L+ P ++ + +FK WGI+I+VRFRE +SVL+AQ
Sbjct: 792 VRQYEKIEKDISQLRKELDGFEDEKEARVTQLDHKASQWKSALKNAAEKVNRLFAQYMGEIGCAGEVGLKEGGYTPASEKAPKYGNFKSWGIQIQVRFREKASMSVLSAQ 901
BLAST of mRNA_P-wetherbeei_contig14264.1.1 vs. uniprot
Match: A0A7S2V466_9STRA (Structural maintenance of chromosomes protein 5 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V466_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 8.290e-12 Identity = 37/98 (37.76%), Postives = 54/98 (55.10%), Query Frame = 1
Query: 43 GVAAQLEALRQSKLTAQADLAQMQAAWEGALRPVVSKLDELFKKYMAQMNCGGSVHLRSEVEDPGGDRDGQLLDFKDWGIEIRVRFREGTKLSVLNAQ 336
G A+L L+++ + + +++ W+ AL KLD+ F KYMA MNCGG V L + +K+WG+EI+VRFRE T L LNA+
Sbjct: 3 GEEARLRGLQEAVQGREEHMRELRERWQQALENAKVKLDDQFSKYMANMNCGGHVVLAKDAM------------YKNWGLEIQVRFREQTSLQTLNAR 88
BLAST of mRNA_P-wetherbeei_contig14264.1.1 vs. uniprot
Match: A0A1E7EXA5_9STRA (Structural maintenance of chromosomes protein 5 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EXA5_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 5.880e-11 Identity = 38/107 (35.51%), Postives = 56/107 (52.34%), Query Frame = 1
Query: 16 YEERKKEIAGVAAQLEALRQSKLTAQADLAQMQAAWEGALRPVVSKLDELFKKYMAQMNCGGSVHLRSEVEDPGGDRDGQLLDFKDWGIEIRVRFREGTKLSVLNAQ 336
YEE+KKE+ L+ + K +L + WE +L +V+ +D+ F YM ++ C G V LR D + F++WG+EIRV FRE SVL+AQ
Sbjct: 887 YEEKKKELEETRGDLDDMTNRKEKKIDELNLKKKPWELSLDEIVTTIDKRFGNYMRELGCKGEVRLRKGKSGDENSNDNEESSFEEWGVEIRVSFRENVPPSVLSAQ 993 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14264.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14264.1.1 >prot_P-wetherbeei_contig14264.1.1 ID=prot_P-wetherbeei_contig14264.1.1|Name=mRNA_P-wetherbeei_contig14264.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp QAIQQYEERKKEIAGVAAQLEALRQSKLTAQADLAQMQAAWEGALRPVVSback to top mRNA from alignment at P-wetherbeei_contig14264:20..367+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14264.1.1 ID=mRNA_P-wetherbeei_contig14264.1.1|Name=mRNA_P-wetherbeei_contig14264.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig14264:20..367+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14264:20..367+ >mRNA_P-wetherbeei_contig14264.1.1 ID=mRNA_P-wetherbeei_contig14264.1.1|Name=mRNA_P-wetherbeei_contig14264.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig14264:20..367+ (Phaeothamnion wetherbeei SAG_119_79)back to top |