mRNA_P-wetherbeei_contig14251.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14251.1.1
Unique NamemRNA_P-wetherbeei_contig14251.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14251.1.1 vs. uniprot
Match: A0A6L5FRD0_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FRD0_9HYPH)

HSP 1 Score: 418 bits (1074), Expect = 6.180e-144
Identity = 212/314 (67.52%), Postives = 254/314 (80.89%), Query Frame = 1
Query:   13 LGIVAGVLLAAS-ASAQTYPTAPVRVLVPFGAGGATDVVARVFAERLQQRMGQSFLIENRGGAAGQIAATAFARSPADGYTLMFTTAAPITIAPLMNDKVQYDPRKDFVPIAVVALQPVWLVVNAGSPLKSLGDIVTRAKDNPGKLTYGTSGVGTELHLAAEAVSRSAGIQMVHVPFRGGGDVITALLGSQIDFAALSTASIAGAVKQGTLRVIAVSSPKRMTDFPDVPTFAELGHPGATMVPWWGLMAPAGTPQAIVERLTQEMKAASEDGALRERLEATFVQIEYSGPQEFARLIAAETALYGGIIRAANIK 951
            LG VA +LL A+ A AQ+YPTAPV+V+VPFGA GATD++ARVFAE+LQQR+GQ F +ENR GA GQIAA AFAR+PADGYTL+F TAAPIT+APL++ KVQYDPRKDFVP+A VA+QPVWL VNA S   ++ D V  AKDNPGKL+YGTSGVGTELHL AE ++RSAGI+MVHVPFRGG  V+ AL+G Q+D   LST SIAG V QG  R +AVSSP+R+  FP VPT AELGHP  TMVPWWG+ APAGTP  IV+RLTQ ++AAS++  + ERL+AT VQ E++GPQEFAR + AETA Y  +I AA +K
Sbjct:   20 LGTVAALLLGATVALAQSYPTAPVKVVVPFGASGATDLLARVFAEQLQQRLGQPFTVENRAGAGGQIAAAAFARAPADGYTLLFATAAPITVAPLLSSKVQYDPRKDFVPVAQVAVQPVWLCVNAKSQFTTMADFVKHAKDNPGKLSYGTSGVGTELHLVAEGLARSAGIEMVHVPFRGGAPVVQALMGQQVDLVFLSTTSIAGPVSQGAFRALAVSSPERLRAFPGVPTMAELGHPSVTMVPWWGMFAPAGTPPVIVDRLTQALQAASKNETVHERLKATLVQFEFAGPQEFARRLQAETAQYRDLISAAKLK 333          
BLAST of mRNA_P-wetherbeei_contig14251.1.1 vs. uniprot
Match: UPI0019149E50 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Ramlibacter ginsenosidimutans TaxID=502333 RepID=UPI0019149E50)

HSP 1 Score: 247 bits (630), Expect = 1.080e-76
Identity = 132/309 (42.72%), Postives = 187/309 (60.52%), Query Frame = 1
Query:   25 AGVLLAASASAQTYPTAPVRVLVPFGAGGATDVVARVFAERLQQRMGQSFLIENRGGAAGQIAATAFARSPADGYTLMFTTAAPITIAPLMNDKVQYDPRKDFVPIAVVALQPVWLVVNAGSPLKSLGDIVTRAKDNPGKLTYGTSGVGTELHLAAEAVSRSAGIQMVHVPFRGGGDVITALLGSQIDFAALSTASIAGAVKQGTLRVIAVSSPKRMTDFPDVPTFAELGHPGATMVPWWGLMAPAGTPQAIVERLTQEMKAASEDGALRERLEATFVQIEYSGPQEFARLIAAETALYGGIIRAANIK 951
            AG+    +A A+ YP  P+R++VP+  GG+TD  AR+ A  L  R+GQ  +++NR GA G +     A+SPADGYTL+F+ A P+T+ P    K+ YDP K F PI +VA QP+ LVV  G  + S+ D++  A+  PGKL+YG+ G G+  HLA E   R A + MVHVP++G G  +  L+G QID      ++ A  VK G LR +A++S +R    PDVPT  + G  G     W+GL+APAGTP AIVE+L+Q   A  ++  LRE L      +    P+EF R   +E   +GGI++AA I+
Sbjct:   25 AGLASHGAALAEGYPDKPIRMIVPYATGGSTDQTARLVARSLSARLGQQVIVDNRAGAGGAVGHEIAAKSPADGYTLLFSAAGPLTVTPHTYAKLAYDPIKGFEPITLVATQPLLLVVKPGLAVNSVADLIREAQARPGKLSYGSFGTGSAAHLAGEYFKRLAKVDMVHVPYKGSGPALVDLVGGQIDLMFDVFSTSAPLVKAGKLRPLAITSTERSPQLPDVPTMQQAGVSGFDAGTWFGLLAPAGTPPAIVEKLSQATNAVLKESELRETLATQGAVVRGGTPEEFKRFFLSEYDKWGGIVKAAGIR 333          
BLAST of mRNA_P-wetherbeei_contig14251.1.1 vs. uniprot
Match: A0A1F3ZPQ2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_64_12 TaxID=1797487 RepID=A0A1F3ZPQ2_9PROT)

HSP 1 Score: 246 bits (628), Expect = 1.750e-76
Identity = 130/316 (41.14%), Postives = 198/316 (62.66%), Query Frame = 1
Query:   13 LGIVAGVL---LAASASAQTYPTAPVRVLVPFGAGGATDVVARVFAERLQQRMGQSFLIENRGGAAGQIAATAFARSPADGYTLMFTTAAPITIAPLMNDKVQYDPRKDFVPIAVVALQPVWLVVNAGSPLKSLGDIVTRAKDNPGKLTYGTSGVGTELHLAAEAVSRSAGIQMVHVPFRGGGDVITALLGSQIDFAALSTASIAGAVKQGTLRVIAVSSPKRMTDFPDVPTFAELGHPGATMVPWWGLMAPAGTPQAIVERLTQEMKAASEDGALRERLEATFVQIEYSGPQEFARLIAAETALYGGIIRAANIK 951
            LG+ A +    LA +  AQ YP+ P+R++VPF  GG TD +ARVF++ LQ+R+GQ  +I+NRGGA  QI   A A++PADGYTL+F  A  +++ P +  KV YD  KDF PIA VA  P+   VN+  P+ +L +++  A+  PG L +G++G G+ LHL  E +   A I M+HVP++GGG  +  L+  QI+  +     IA   + G LRV+A + P R    P+VPT AELG P   +V W+G++ PAG PQ IV++L++E+ A  +  A+++R      + +   P +F + IAAET  + G+++AA ++
Sbjct:   10 LGLAAAIFFGALATAVHAQDYPSRPIRLIVPFPPGGTTDTLARVFSQFLQERIGQPIVIDNRGGAGSQIGVDAGAKAPADGYTLLFGPADGLSLLPAVKKKVPYDTAKDFTPIAFVARSPLAYAVNSKLPVNTLAELIAYARSKPGALRFGSAGFGSILHLGMELLRVDARIDMLHVPYKGGGPALQDLIAGQIEMMSPGPVGIAKRAEAGQLRVLAQTGPTRHPLLPNVPTTAELGMPELQVVSWFGVLGPAGLPQPIVDQLSREIAAVLDQPAVKKRFIDVGCEADRMSPAQFGQFIAAETRKWAGVVKAAGLQ 325          
BLAST of mRNA_P-wetherbeei_contig14251.1.1 vs. uniprot
Match: A0A6P2EUH1_9BURK (Argininosuccinate lyase n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A6P2EUH1_9BURK)

HSP 1 Score: 245 bits (626), Expect = 3.100e-76
Identity = 134/312 (42.95%), Postives = 195/312 (62.50%), Query Frame = 1
Query:   22 VAGVLLAASAS---AQTYPTAPVRVLVPFGAGGATDVVARVFAERLQQRMGQSFLIENRGGAAGQIAATAFARSPADGYTLMFTTAAPITIAPLMNDKVQYDPRKDFVPIAVVALQPVWLVVNAGSPLKSLGDIVTRAKDNPGKLTYGTSGVGTELHLAAEAVSRSAGIQMVHVPFRGGGDVITALLGSQIDFAALSTASIAGAVKQGTLRVIAVSSPKRMTDFPDVPTFAELGHPGATMVPWWGLMAPAGTPQAIVERLTQEMKAASEDGALRERLEATFVQIEYSGPQEFARLIAAETALYGGIIRAANI 948
            +AG+L+A +     AQ +P+ PV ++VPF  GG TD  AR+ AE+L +R GQ  L++N+GGAAGQI A   A++  DGYT++F      +I P +  K+ YDP K F P+++VA  P+ L+VN   P ++  +++  AK  PG+++Y +SG G+  HLAAE    S G  ++HVP+RGGG  IT LLG Q+  + L+    +G +K G LR +AV+S KR++  PDVPT AE G      + W GL+APAGTP  +VER+  +++A   D A++ R  A       + PQEFA+LIA +   YG I+R  NI
Sbjct:   10 LAGLLMAIAHGVCLAQAFPSKPVTLVVPFPPGGGTDTGARIMAEQLGKRWGQPVLVDNKGGAAGQIGADVVAKARPDGYTMLFGNVGTQSINPSLYRKLPYDPDKAFSPVSLVAELPLALMVNPAVPARTPAELIALAKSQPGRMSYSSSGAGSAPHLAAELFKDSTGTFILHVPYRGGGPAITDLLGGQVQMSFLTVLEASGHIKAGKLRALAVTSDKRVSALPDVPTLAESGLRNFNAISWIGLLAPAGTPPDLVERIAADVRAVLSDDAVKARFAALGGVPRATSPQEFAKLIADDRGRYGQIVRTRNI 321          
BLAST of mRNA_P-wetherbeei_contig14251.1.1 vs. uniprot
Match: UPI0013317A32 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Roseomonas harenae TaxID=2692566 RepID=UPI0013317A32)

HSP 1 Score: 244 bits (622), Expect = 1.540e-75
Identity = 138/311 (44.37%), Postives = 191/311 (61.41%), Query Frame = 1
Query:   28 GVLLAASASAQ--TYPTAPVRVLVPFGAGGATDVVARVFAERLQQRMGQSFLIENRGGAAGQIAATAFARSPADGYTLMFTTAAPITIA-PLMNDKVQYDPRKDFVPIAVVALQPVWLVVNAGSPLKSLGDIVTRAKDNPGKLTYGTSGVGTELHLAAEAVSRSAGIQMVHVPFRGGGDVITALLGSQIDFAALSTASIAGAVKQGTLRVIAVSSPKRMTDFPDVPTFAELGHPGATMVPWWGLMAPAGTPQAIVERLTQEMKAASEDGALRERLEATFVQIEYSGPQEFARLIAAETALYGGIIRAANIK 951
            G LL   A AQ   +P+ PVR++VPF AGG TD++AR+ AERLQQR+G +F++ENRGGA G I +   A++  DGYTL+  T     I   L  D + Y P  D   ++ V+  P  L V+AGSP ++L D+VTRAK N G LTYG+SG G+ LHL  E +   AGI ++HVP+RG G ++T  +  ++D A  +  S  G ++ G LR +AV+SPKR    PDVPT  E G PG   V W+G+ APA TP+ I+ERL  E+ AA  + A R ++     +     P+EF RLI AE   +  +IR A ++
Sbjct:   20 GSLLPKPAGAQGAAWPSRPVRLIVPFPAGGTTDLLARILAERLQQRLGATFVVENRGGAGGSIGSDVVAKADPDGYTLLMATIGTAAINYELYKDSITYKPA-DLAAVSNVSNVPNVLTVHAGSPTRTLQDLVTRAKSNAGGLTYGSSGNGSSLHLTGELLKAEAGIDLIHVPYRGSGPMLTDAIAGRVDMAIDNLPSSMGHIQGGRLRALAVTSPKRSPSLPDVPTVREAGLPGVETVAWFGIQAPARTPRPIIERLATEIHAAVTEPATRAKIAELGGEPVGDSPEEFQRLIDAEITRWTEVIRRAKVR 329          
BLAST of mRNA_P-wetherbeei_contig14251.1.1 vs. uniprot
Match: A0A0S9L171_9BURK (Uncharacterized protein n=2 Tax=Pseudorhodoferax sp. Leaf265 TaxID=1736315 RepID=A0A0S9L171_9BURK)

HSP 1 Score: 243 bits (619), Expect = 4.090e-75
Identity = 130/310 (41.94%), Postives = 185/310 (59.68%), Query Frame = 1
Query:   19 IVAGVLLAASASAQTYPTAPVRVLVPFGAGGATDVVARVFAERLQQRMGQSFLIENRGGAAGQIAATAFARSPADGYTLMFTTAAPITIAPLMNDKVQYDPRKDFVPIAVVALQPVWLVVNAGSPLKSLGDIVTRAKDNPGKLTYGTSGVGTELHLAAEAVSRSAGIQMVHVPFRGGGDVITALLGSQIDFAALSTASIAGAVKQGTLRVIAVSSPKRMTDFPDVPTFAELGHPGATMVPWWGLMAPAGTPQAIVERLTQEMKAASEDGALRERLEATFVQIEYSGPQEFARLIAAETALYGGIIRAANI 948
            + AG L   + +AQTYPT PV ++VPF  GG TDV AR+FA+ L  R+GQS +++NR GAAG +    F R+ ADGYTL+FT  +P+TIA  ++ K+ Y P +D VPIA+  L PV +VV A  P+KSL ++   ++ NP  L +G+ G G ELHLA E + R A + + HVP++G G  +  LL  +I     S AS++  +  G LR IA  S +R+  FPDVPT AE G+P      W+GL AP  TP  +V+RL QE  A +     R +L    V     G Q FA  I    A++  ++++ ++
Sbjct:   14 VAAGCLWGLAVAAQTYPTRPVTLIVPFPPGGGTDVAARLFAKELGDRLGQSVVVDNRAGAAGNLGTGVFVRAAADGYTLLFTAQSPVTIADSISPKLPYSPTRDLVPIALTQLTPVLVVVPANLPVKSLAELAKVSRANPSSLFFGSPGTGNELHLAGEWLKREARMDITHVPYKGSGPALQDLLAGRIQMLVASPASVSQHIADGRLRAIATLSTQRLAGFPDVPTAAESGYPQLVYDAWFGLFAPKNTPAPVVKRLEQEAAAIASVPGYRRQLSDLGVLASGDGAQAFAGTIGKNRAVWSDLVKSLHL 323          
BLAST of mRNA_P-wetherbeei_contig14251.1.1 vs. uniprot
Match: UPI0009DC1E3A (tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Comamonadaceae TaxID=80864 RepID=UPI0009DC1E3A)

HSP 1 Score: 241 bits (616), Expect = 5.050e-75
Identity = 131/296 (44.26%), Postives = 181/296 (61.15%), Query Frame = 1
Query:   64 YPTAPVRVLVPFGAGGATDVVARVFAERLQQRMGQSFLIENRGGAAGQIAATAFARSPADGYTLMFTTAAPITIAPLMNDKVQYDPRKDFVPIAVVALQPVWLVVNAGSPLKSLGDIVTRAKDNPGKLTYGTSGVGTELHLAAEAVSRSAGIQMVHVPFRGGGDVITALLGSQIDFAALSTASIAGAVKQGTLRVIAVSSPKRMTDFPDVPTFAELGHPGATMVPWWGLMAPAGTPQAIVERLTQEMKAASEDGALRERLEATFVQIEYSGPQEFARLIAAETALYGGIIRAANIK 951
            +P  P++++VP+ AGG  D  AR+ A +L  R+GQ  L++NR G  G I ATA A++PADGYTL+    A  T+ P +  K+ YDP KDF PI+ +   P+ LVV A SPLKS  D+V  AK  PGKL+Y ++G G   HLAAE   + A + MVH+P+RGG   +T L G Q+D    +T++    VK G LR +A++S  R  D+PD+PT AE G PG  +  W GL APAGTP A+++RL  E +AA     L+ RL    VQ   S   +F R + AET  +  +I+ A I+
Sbjct:    6 WPDRPIKLVVPYPAGGNADSTARLLATQLSDRLGQQVLVDNRPGGGGTIGATAVAKAPADGYTLLLDATA-FTVNPSLFSKLAYDPAKDFAPISQITRVPMLLVVPAASPLKSPADLVRAAKAAPGKLSYASAGNGGAQHLAAELYKQGAKLSMVHIPYRGGAPALTDLAGGQVDLMFSATSASGAFVKSGKLRALAITSADRSADWPDLPTVAETGLPGFAVYEWNGLFAPAGTPPAVLQRLETETRAALASPELKSRLSDLGVQPVGSSSADFRRFVQAETTRWADVIKRAGIR 300          
BLAST of mRNA_P-wetherbeei_contig14251.1.1 vs. uniprot
Match: F6AQ70_DELSC (Uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) TaxID=742013 RepID=F6AQ70_DELSC)

HSP 1 Score: 242 bits (618), Expect = 5.120e-75
Identity = 132/302 (43.71%), Postives = 187/302 (61.92%), Query Frame = 1
Query:   40 AASASAQTYPTAPVRVLVPFGAGGATDVVARVFAERLQQRMGQSFLIENRGGAAGQIAATAFARSPADGYTLMFTTAAPITIAPLMNDKVQYDPRKDFVPIAVVALQPVWLVVNAGSPLKSLGDIVTRAKDNPGKLTYGTSGVGTELHLAAEAVSRSAGIQMVHVPFRGGGDVITALLGSQIDFAALSTASIAGAVKQGTLRVIAVSSPKRMTDFPDVPTFAELGHPGATMVPWWGLMAPAGTPQAIVERLTQEMKAASEDGALRERLEATFVQIEYSGPQEFARLIAAETALYGGIIRAAN 945
            AA A +  YP  PV ++VPF AGG TD +AR  A++L   +GQ  +I+NRGGA G IAA A AR+PADGYTL F T   + I P +  K++YDP KDF PI+++A  P  LVV+   P++++ D+V  AK+ PG LTYG++G G+  HL+ E +   AGIQ+ HVP++G       LLG QI+    + A+    +  G +R IAV+  +R    PDVPTF E G P   +  W+G++APAGTP AIV RL+ E+ A      + +R++A   +   S P EFA LI ++ A +  II+A+ 
Sbjct:   20 AAHAQSAPYPGKPVTLVVPFPAGGPTDAMARALAQKLGDHLGQPVVIDNRGGAGGTIAAEAVARAPADGYTLFFATTGTMAINPSLYKKIRYDPVKDFAPISLMATTPNVLVVHPQIPIRTVSDLVKLAKEKPGSLTYGSAGNGSSTHLSGELLRSMAGIQITHVPYKGSAPATVDLLGGQINMMFDTIATQVQNISAGKVRAIAVTGTERSPLLPDVPTFRESGLPNYDVTIWFGVLAPAGTPDAIVRRLSSEIGAVMATDEMAKRMQADGAKARSSSPAEFAALIKSDLAKWAPIIKASG 321          
BLAST of mRNA_P-wetherbeei_contig14251.1.1 vs. uniprot
Match: A0A6P2G0K1_9BURK (Argininosuccinate lyase n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A6P2G0K1_9BURK)

HSP 1 Score: 242 bits (617), Expect = 7.240e-75
Identity = 124/308 (40.26%), Postives = 195/308 (63.31%), Query Frame = 1
Query:   37 LAASAS---AQTYPTAPVRVLVPFGAGGATDVVARVFAERLQQRMGQSFLIENRGGAAGQIAATAFARSPADGYTLMFTTAAPITIAPLMNDKVQYDPRKDFVPIAVVALQPVWLVVNAGSPLKSLGDIVTRAKDNPGKLTYGTSGVGTELHLAAEAVSRSAGIQMVHVPFRGGGDVITALLGSQIDFAALSTASIAGAVKQGTLRVIAVSSPKRMTDFPDVPTFAELGHPGATMVPWWGLMAPAGTPQAIVERLTQEMKAASEDGALRERLEATFVQIEYSGPQEFARLIAAETALYGGIIRAANIK 951
            LAASA+   A  YP+ P+R+++P+  GG+ D+V R+ A++L + +GQ+ +++N+GG +G I +   +R+PADGYTL+   +    I P +   + YDP+KDF PI+++A QP+ L V    P ++L D V  AK  PG LTY ++G G   HLA E  SR AGI+ +HVP++G G  +  ++G Q+D   +S     G +  G LR +AV++PKR++   DVPTFAE G+P   +  W+GLMAPAGTP AIV++L  E++ A +   + ++L+A   +     PQEFA  +AA+  L+ G+ ++   +
Sbjct:   16 LAASAAGPDASDYPSKPIRLVIPYPPGGSADLVGRMVADKLGKSLGQTVVVDNKGGGSGSIGSDFVSRAPADGYTLLVAISDTHAINPAVMANLPYDPQKDFAPISLLATQPMVLAVGRHMPARTLADFVAEAKKRPGALTYASNGKGGLQHLAMELFSRQAGIKALHVPYKGAGPALADVIGGQVDALFISLQGAGGNLGTGNLRALAVAAPKRLSMAADVPTFAESGYPDTVVTQWYGLMAPAGTPPAIVQKLNSEVRKALDTPDISDKLKAVGTEPAGDTPQEFAAFLAAQIKLWAGVAKSVGAR 323          
BLAST of mRNA_P-wetherbeei_contig14251.1.1 vs. uniprot
Match: A0A653JM84_9BURK (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Burkholderiales bacterium 8X TaxID=2653183 RepID=A0A653JM84_9BURK)

HSP 1 Score: 241 bits (615), Expect = 1.850e-74
Identity = 129/309 (41.75%), Postives = 189/309 (61.17%), Query Frame = 1
Query:   28 GVLLAASASAQTYPTAPVRVLVPFGAGGATDVVARVFAERLQQRMGQSFLIENRGGAAGQIAATAFARSPADGYTLMFTTAAPITIAPLMNDKVQYDPRKDFVPIAVVALQPVWLVVNAGSPLKSLGDIVTRAKDNPGKLTYGTSGVGTELHLAAEAVSRSAGIQMVHVPFRGGGDVITALLGSQID--FAALSTASIAGAVKQGTLRVIAVSSPKRMTDFPDVPTFAELGHPGATMVPWWGLMAPAGTPQAIVERLTQEMKAASEDGALRERLEATFVQIEYSGPQEFARLIAAETALYGGIIRAANI 948
            G L  A A AQ YPT  +++++P+  GG+TD   R+ A  L  R+GQ  ++ENR GA G +   A A++PADGYTL+F+ A P+T+ P    K+ YDP K F P+ +VA QP+ LVVN    ++++ D+V  AK   GKLTYG+ G G+  HLA E       + MVHVP++G G  +  L+G QID  F   STA  A  VK   LR +A++S +R + FPDVPT  + G  G     W+GL+APAGTP+ + + L+Q + A+ ++  LR+ LE+   ++    PQ+F+R   AE   +G I++AA +
Sbjct:   24 GALPFAQAQAQAYPTKAIKLVIPYAVGGSTDQTGRLLARSLSTRLGQPVVVENRAGAGGSVGHEAVAKAPADGYTLLFSAAGPLTVTPHTYAKLPYDPVKSFEPVTLVATQPLLLVVNPALKVQNVADLVREAKSRAGKLTYGSFGNGSAAHLAGEYFKTLTKVDMVHVPYKGSGPALVDLVGGQIDLMFDVFSTA--APLVKGSKLRALAITSAERSSQFPDVPTMQQAGVDGFEAGTWFGLLAPAGTPKDVTDALSQAVNASLQEKELRDTLESQGARVRGGTPQDFSRFFLAEYDKWGKIVKAAGV 330          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14251.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L5FRD0_9HYPH6.180e-14467.52Tripartite tricarboxylate transporter substrate bi... [more]
UPI0019149E501.080e-7642.72tripartite tricarboxylate transporter substrate bi... [more]
A0A1F3ZPQ2_9PROT1.750e-7641.14Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A6P2EUH1_9BURK3.100e-7642.95Argininosuccinate lyase n=2 Tax=unclassified Vario... [more]
UPI0013317A321.540e-7544.37tripartite tricarboxylate transporter substrate bi... [more]
A0A0S9L171_9BURK4.090e-7541.94Uncharacterized protein n=2 Tax=Pseudorhodoferax s... [more]
UPI0009DC1E3A5.050e-7544.26tripartite tricarboxylate transporter substrate bi... [more]
F6AQ70_DELSC5.120e-7543.71Uncharacterized protein n=1 Tax=Delftia sp. (strai... [more]
A0A6P2G0K1_9BURK7.240e-7540.26Argininosuccinate lyase n=2 Tax=unclassified Vario... [more]
A0A653JM84_9BURK1.850e-7441.75Tripartite-type tricarboxylate transporter, recept... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14251contigP-wetherbeei_contig14251:104..1066 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog335659.S23_52880
Preferred nameMA20_17650
PFAMsTctC
Model size963
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue5.7e-74
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria,2TQWK@28211|Alphaproteobacteria,3JW1A@41294|Bradyrhizobiaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size963
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186015.0995219-CDS-P-wetherbeei_contig14251:103..10661683186015.0995219-CDS-P-wetherbeei_contig14251:103..1066Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14251 104..1066 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14251.1.1prot_P-wetherbeei_contig14251.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14251 104..1066 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14251.1.1

>prot_P-wetherbeei_contig14251.1.1 ID=prot_P-wetherbeei_contig14251.1.1|Name=mRNA_P-wetherbeei_contig14251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp
RPFPLGIVAGVLLAASASAQTYPTAPVRVLVPFGAGGATDVVARVFAERL
QQRMGQSFLIENRGGAAGQIAATAFARSPADGYTLMFTTAAPITIAPLMN
DKVQYDPRKDFVPIAVVALQPVWLVVNAGSPLKSLGDIVTRAKDNPGKLT
YGTSGVGTELHLAAEAVSRSAGIQMVHVPFRGGGDVITALLGSQIDFAAL
STASIAGAVKQGTLRVIAVSSPKRMTDFPDVPTFAELGHPGATMVPWWGL
MAPAGTPQAIVERLTQEMKAASEDGALRERLEATFVQIEYSGPQEFARLI
AAETALYGGIIRAANIKFGQ*
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mRNA from alignment at P-wetherbeei_contig14251:104..1066+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14251.1.1 ID=mRNA_P-wetherbeei_contig14251.1.1|Name=mRNA_P-wetherbeei_contig14251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig14251:104..1066+ (Phaeothamnion wetherbeei SAG_119_79)
CGTCCGTTCCCGCTTGGCATCGTCGCGGGCGTCCTGCTGGCAGCATCGGC GTCGGCACAAACCTATCCGACGGCGCCGGTCCGGGTGCTGGTGCCGTTCG GCGCGGGCGGCGCCACCGATGTGGTGGCCCGCGTGTTCGCCGAGCGCCTG CAGCAGCGCATGGGCCAGTCGTTCCTGATCGAGAACCGCGGCGGCGCGGC CGGCCAGATCGCCGCCACCGCGTTCGCCCGCTCGCCGGCCGATGGCTACA CGCTGATGTTCACCACCGCGGCCCCGATCACCATCGCGCCGCTGATGAAC GACAAGGTGCAGTACGACCCGCGCAAGGACTTCGTGCCCATCGCCGTGGT CGCGCTCCAGCCGGTCTGGCTGGTGGTGAACGCCGGCTCGCCGCTGAAAT CGCTCGGCGACATCGTCACGCGGGCGAAGGACAATCCCGGCAAGCTCACC TATGGGACGTCCGGCGTCGGCACCGAGCTGCATCTGGCCGCCGAAGCGGT GTCCCGCTCGGCCGGAATCCAGATGGTGCACGTGCCGTTCCGCGGTGGCG GCGATGTCATCACCGCGCTGCTCGGCTCGCAGATCGATTTCGCGGCGCTG AGCACGGCGTCGATCGCAGGCGCTGTGAAGCAGGGGACCTTGCGGGTGAT CGCGGTGAGTTCGCCGAAACGGATGACCGATTTCCCGGACGTGCCGACGT TCGCCGAGCTCGGCCATCCTGGCGCCACCATGGTGCCGTGGTGGGGGCTG ATGGCGCCGGCCGGGACGCCGCAGGCGATCGTCGAGCGGCTCACGCAGGA GATGAAAGCGGCCAGTGAGGACGGAGCCCTGCGCGAGCGGTTGGAGGCGA CCTTCGTGCAGATCGAATATTCGGGACCGCAGGAGTTCGCGCGTCTGATC GCCGCCGAGACCGCGCTCTACGGCGGGATCATCCGCGCGGCCAATATCAA GTTCGGACAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14251:104..1066+

>mRNA_P-wetherbeei_contig14251.1.1 ID=mRNA_P-wetherbeei_contig14251.1.1|Name=mRNA_P-wetherbeei_contig14251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig14251:104..1066+ (Phaeothamnion wetherbeei SAG_119_79)
CGTCCGTTCCCGCTTGGCATCGTCGCGGGCGTCCTGCTGGCAGCATCGGC
GTCGGCACAAACCTATCCGACGGCGCCGGTCCGGGTGCTGGTGCCGTTCG
GCGCGGGCGGCGCCACCGATGTGGTGGCCCGCGTGTTCGCCGAGCGCCTG
CAGCAGCGCATGGGCCAGTCGTTCCTGATCGAGAACCGCGGCGGCGCGGC
CGGCCAGATCGCCGCCACCGCGTTCGCCCGCTCGCCGGCCGATGGCTACA
CGCTGATGTTCACCACCGCGGCCCCGATCACCATCGCGCCGCTGATGAAC
GACAAGGTGCAGTACGACCCGCGCAAGGACTTCGTGCCCATCGCCGTGGT
CGCGCTCCAGCCGGTCTGGCTGGTGGTGAACGCCGGCTCGCCGCTGAAAT
CGCTCGGCGACATCGTCACGCGGGCGAAGGACAATCCCGGCAAGCTCACC
TATGGGACGTCCGGCGTCGGCACCGAGCTGCATCTGGCCGCCGAAGCGGT
GTCCCGCTCGGCCGGAATCCAGATGGTGCACGTGCCGTTCCGCGGTGGCG
GCGATGTCATCACCGCGCTGCTCGGCTCGCAGATCGATTTCGCGGCGCTG
AGCACGGCGTCGATCGCAGGCGCTGTGAAGCAGGGGACCTTGCGGGTGAT
CGCGGTGAGTTCGCCGAAACGGATGACCGATTTCCCGGACGTGCCGACGT
TCGCCGAGCTCGGCCATCCTGGCGCCACCATGGTGCCGTGGTGGGGGCTG
ATGGCGCCGGCCGGGACGCCGCAGGCGATCGTCGAGCGGCTCACGCAGGA
GATGAAAGCGGCCAGTGAGGACGGAGCCCTGCGCGAGCGGTTGGAGGCGA
CCTTCGTGCAGATCGAATATTCGGGACCGCAGGAGTTCGCGCGTCTGATC
GCCGCCGAGACCGCGCTCTACGGCGGGATCATCCGCGCGGCCAATATCAA
GTTCGGACAATGA
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