mRNA_P-wetherbeei_contig1425.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1425.6.1
Unique NamemRNA_P-wetherbeei_contig1425.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: D8LAY6_ECTSI (Nephroretinin 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY6_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 2.760e-62
Identity = 129/257 (50.19%), Postives = 155/257 (60.31%), Query Frame = 1
Query:    1 PMAAVVGGPAPAAPELSRASRTRLSRHGFADVMQDSVDGHT-----DPTGRA---ADLDLEATDPLALHELTLQFAGLRA--------PRSD----------------------APLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRENRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
            P A  VGG AP    LSRASRTRLSRHGF DVM+D+VD        DP  R     DLDLE TDPLA HE+TLQFA  R          R+D                      + +P S+YFTYQ + C P +TERM LRP             G  D  Y+ + G G + L ILVR+ RYGRDEPSL LRHS+DTT++QPFEA AFA Y+A  TL+VDVWD DALMH+GT+A+ LR L+RQ++ VVK A EYE++
Sbjct:  822 PPAVTVGGFAPLPQGLSRASRTRLSRHGFTDVMKDTVDSFAQTSGFDPLRRQNIPIDLDLEVTDPLAKHEVTLQFAAFRGLSSGGSGGDRTDNSSHRSVGGGADVWHEGGGDMVSSMPTSLYFTYQFYTCLPTRTERMLLRPD------------GPKDRLYQAEGG-GVSRLSILVRDGRYGRDEPSLGLRHSIDTTMMQPFEAHAFATYMAGSTLFVDVWDADALMHIGTLAMPLRELMRQQKGVVKTAMEYEIV 1065          
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A835YU49_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU49_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.090e-51
Identity = 113/257 (43.97%), Postives = 148/257 (57.59%), Query Frame = 1
Query:    1 PMAAVVGGPAPA-APELSRASRTRLSRHGFADVMQDS---------------------------------------VDGHTDPTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRENRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYE 651
            P AAVVGG + A A +LSRASRTRLSRHG++DVM+D+                                             P  +  ++ LE +DPLALHELTLQFAG R PR+   LP +V+ TYQ + C P++TER+ L P A           G+ + PYR + G+ +  L  LVRE  YGRDEP+ AL+H VD + +QP EA  FA Y+A ++L+VDVWD DA +HLGT+AV LR L+RQ + V K A E+E
Sbjct: 1126 PTAAVVGGGSGAGAHDLSRASRTRLSRHGYSDVMRDTSHREEAVTLMLPLLSLTPLLXXXXXXXXXXXXXXXXXXXXXXXAQPIAKRVNIGLELSDPLALHELTLQFAGYRCPRAAMSLPAAVHLTYQFYTCAPLRTERLRLLPDA---------PRGAREGPYRAEEGSHSPCL--LVREECYGRDEPAHALKHRVDCSYMQPSEAAHFARYMATKSLFVDVWDADAQLHLGTVAVPLRTLMRQGKAVAKHAGEFE 1371          
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A7S3ZVW1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVW1_9STRA)

HSP 1 Score: 162 bits (411), Expect = 2.000e-42
Identity = 98/217 (45.16%), Postives = 121/217 (55.76%), Query Frame = 1
Query:   16 VGGPAPAAPELSRASRTRLSRHGFADVMQDSVDGHT--DPTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVREN-RYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
            VGG  P    LSRA R+RL+RHG+  V  D        +P     DLDLEA+DPLALHE+T+QFA  RA      LP +VYFT+Q +   P +TER+ L   A        G     DA             R+LVRE  R G DEP L L+ +VD     P EA  FA YLA + L+VDVWD D+ +H+GT A+ L  LLRQR PV K+A EY V+
Sbjct:  436 VGGSKPQGDSLSRAQRSRLARHGYPTVQLDDSRALQPGNPEMVKYDLDLEASDPLALHEITVQFAAFRANTPSQVLPRAVYFTFQFYTLPPTRTERLRLASRAPEESKVDRGVEAPNDAS------------RLLVRETGRRGSDEPPLILKFAVDCNTGAPNEARFFAEYLATKVLHVDVWDADSRLHVGTSAIPLDRLLRQRAPVAKVAAEYSVV 640          
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A7S3ZVW2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVW2_9STRA)

HSP 1 Score: 162 bits (411), Expect = 2.010e-42
Identity = 98/217 (45.16%), Postives = 121/217 (55.76%), Query Frame = 1
Query:   16 VGGPAPAAPELSRASRTRLSRHGFADVMQDSVDGHT--DPTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVREN-RYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
            VGG  P    LSRA R+RL+RHG+  V  D        +P     DLDLEA+DPLALHE+T+QFA  RA      LP +VYFT+Q +   P +TER+ L   A        G     DA             R+LVRE  R G DEP L L+ +VD     P EA  FA YLA + L+VDVWD D+ +H+GT A+ L  LLRQR PV K+A EY V+
Sbjct:  726 VGGSKPQGDSLSRAQRSRLARHGYPTVQLDDSRALQPGNPEMVKYDLDLEASDPLALHEITVQFAAFRANTPSQVLPRAVYFTFQFYTLPPTRTERLRLASRAPEESKVDRGVEAPNDAS------------RLLVRETGRRGSDEPPLILKFAVDCNTGAPNEARFFAEYLATKVLHVDVWDADSRLHVGTSAIPLDRLLRQRAPVAKVAAEYSVV 930          
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A7S2C1Z8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1Z8_9STRA)

HSP 1 Score: 159 bits (401), Expect = 4.290e-41
Identity = 97/218 (44.50%), Postives = 129/218 (59.17%), Query Frame = 1
Query:   13 VVGGPAPAAPELSRASRTRLSRHGFADV-MQDSVDGHT-DPTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRE-NRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
            +VGGPAP A EL+RAS+ RLSRHGF+ V + D+      +   R + +D E  D  A +E+   FA  RAP  + PLP S+YF+Y  ++ +PV+TER  LR           G S S   P            R+LV++  R GRD+  +  +H++DT+ +  FEA  F  YL  RTLYVDVWDGDA +H+GT AV LR LLRQ RPVVK   EY+V+
Sbjct:  180 LVGGPAPLAKELTRASQARLSRHGFSTVALHDAAQAQALEELSRPSIMD-ELHDTRARNEIVFCFAAYRAPARNEPLPSSIYFSYHFFDRKPVRTERGLLRGE---------GASASNAIP------------RVLVQDMGRRGRDDAPVTTKHTIDTSEMTVFEARQFYEYLGSRTLYVDVWDGDAQIHIGTAAVPLRQLLRQGRPVVKKTLEYDVV 375          
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A7S2QW27_9STRA (Hypothetical protein n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QW27_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.000e-35
Identity = 87/226 (38.50%), Postives = 125/226 (55.31%), Query Frame = 1
Query:    1 PMAAVVGGPAPAAPELSRASRTRLSRHGFAD-VMQDSVDGHTDPTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRE------NRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
            P A  +   AP    +SRA+RTRL RHGF + V+++  D  +     + ++D E  D    HE+TLQFA   A    APLP S+YFT+Q ++ +P +TER+ LR ++                  R D        R+L RE      N Y    PS  L+ ++D +++   EA+ F +YL  ++LYVDVWDGDALMH GT+A+ L+ L+RQ +   KLAR Y+VI
Sbjct:  795 PNAMAINNSAPLDNPMSRAARTRLGRHGFFEKVLENYDDAQSADPSTSYNIDTELADSRLRHEITLQFAAFNAVEKSAPLPNSLYFTFQFYDKEPTRTERLVLRKSS------------------RSDEDDHTV-ARVLCREKPGKGSNEYS---PSRTLKFTIDLSMIGVSEAKNFVSYLKNKSLYVDVWDGDALMHYGTIAIPLKKLMRQGKNTSKLARVYDVI 998          
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A485L781_9STRA (Aste57867_17057 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L781_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.760e-27
Identity = 79/211 (37.44%), Postives = 110/211 (52.13%), Query Frame = 1
Query:   43 ELSRASRTRLSRHGFADVMQDSV----DGHTDPTGRAADLDLEATDPLALHELTLQFAGLR--APRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRENRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
            ELSRAS++ L+RHGF D +  SV         P      +  E  D + L ++ +QFA LR  A  S +P P SV+FT+Q +  +P +TER+ + PT                          A    +L R++     +PSLAL   V TT   P EA AFA+YL  + L VDVWDGD+L+HLG++++ L  L+RQ   V K   EYEV+
Sbjct:  706 ELSRASKSLLTRHGFYDAVTTSVAEPRPSTKPPVAATKSIGAELQDGMNLLDIQIQFAALRTMAVPSSSP-PASVFFTFQFYTFEPTRTERLVVTPTQ-------------------------APGTFLLCRDHA---KKPSLALHFEVHTTKHCPLEAAAFASYLLTKPLVVDVWDGDSLLHLGSLSIPLHVLMRQGLRVKKHHAEYEVV 887          
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A5D6XWL2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWL2_9STRA)

HSP 1 Score: 115 bits (287), Expect = 7.830e-26
Identity = 75/228 (32.89%), Postives = 109/228 (47.81%), Query Frame = 1
Query:   43 ELSRASRTRLSRHGFADVMQDSVDGHTD---------------------PTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGA-AELRILVRENRYGRDEPSLALRHSVDTTL-LQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
            ELSRASRT L+R+GF D    S   H                       P   +  L++E  D    HE+   FA  R+  ++  +P  +YFT+Q +   P +TE + L                        D+GAG  ++  +L+RE+   +  PSLA++  +DTT+ L P E  +FA YL  R+LYVDVWD D+L  +GT A+ L  LLRQ   + K   E +V+
Sbjct:  780 ELSRASRTLLTRYGFMDAHDTSAVSHEAADLPSSSQQPIAGTGGVARALPPASSKSLEVELNDAYKAHEVRFHFAAYRSLGAEPLVPTRMYFTFQFYTFPPTRTETLRLSKAF--------------------DNGAGGESQTALLMRESPASK--PSLAIQFDIDTTVTLDPLEPRSFAEYLLQRSLYVDVWDADSLFQIGTFAIPLHELLRQGSGIKKFQAEADVV 985          
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: W4H6W9_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6W9_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.040e-25
Identity = 80/221 (36.20%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   43 ELSRASRTRLSRHGFADV-----MQD--------SVDGHTDPTGRAADLDLEATDPLALHELTLQFAGLRAPRSD----APLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRENRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEV 654
            ELSRAS++ L+RHGF D      M+D        S  G   P      +  E  D L L E+T QFA  RA        +PLP S+YFT+Q +  +P K+ER+ +  T                          AA   +L R++     +PSLA++  + TT   P EA AFA YL  ++L+VDVWDG++L+ LG+M V L  L+RQ   V K   E+EV
Sbjct:  686 ELSRASKSLLTRHGFYDTVTSVPMEDNNRPNQHSSASGMHHPLPPLKTVADELRDGLNLLEITFQFAAFRALSESGGQPSPLPTSMYFTFQFYTFEPTKSERLLVTSTP-------------------------AAATYLLCRDHA---KKPSLAIQFDLHTTKQCPLEAAAFATYLLTKSLHVDVWDGESLLPLGSMTVPLHDLMRQGNRVKKYHAEFEV 878          
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A482RWW6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWW6_9ARCH)

HSP 1 Score: 113 bits (282), Expect = 3.570e-25
Identity = 72/239 (30.13%), Postives = 115/239 (48.12%), Query Frame = 1
Query:   46 LSRASRTRLSRHGFADVMQDSVD-----------------------------GHTDPTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPL------PESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRENRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
            ++R ++TRL+RHG  DV+ D+ D                              + +  G+  DL  EA D L + E+ +QF G RA  ++         P S+Y ++Q + CQP +TE M L                  DA    D G+    + +LVR+    R +P L LR+ VD +    +E+  FA YLA +++Y+DVWD D++++LGT+ +  +  +RQ  P VK A E ++I
Sbjct:  561 MTRGAKTRLNRHGITDVITDTADYFLQQEEAYKDASAHGYQRSVLKKPSSILNNYNAMGQRVDLYKEAEDELNISEINIQFVGYRAAVAENSTDLVFHAPRSIYCSFQFYACQPTRTEAMSLL-----------------DA----DKGS----VHVLVRDEPSARRDPPLVLRYIVDNSKTSMYESYEFAGYLAQKSIYIDVWDADSMIYLGTVGIPCKLFMRQGAPYVKHAVEVDII 774          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAY6_ECTSI2.760e-6250.19Nephroretinin 4 n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A835YU49_9STRA2.090e-5143.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3ZVW1_9STRA2.000e-4245.16Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3ZVW2_9STRA2.010e-4245.16Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2C1Z8_9STRA4.290e-4144.50Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2QW27_9STRA1.000e-3538.50Hypothetical protein n=2 Tax=Triparma pacifica Tax... [more]
A0A485L781_9STRA2.760e-2737.44Aste57867_17057 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6XWL2_9STRA7.830e-2632.89Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W4H6W9_9STRA2.040e-2536.20Uncharacterized protein n=11 Tax=Aphanomyces astac... [more]
A0A482RWW6_9ARCH3.570e-2530.13Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1425contigP-wetherbeei_contig1425:6420..7076 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LAY6
PFAMsEF-hand_1,EF-hand_5,EF-hand_7,EF-hand_8
Model size657
Max annot lvl2759|Eukaryota
KEGG koko:K02183
KEGG Pathwayko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005432,GO:0005488,GO:0005509,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015081,GO:0015085,GO:0015291,GO:0015297,GO:0015298,GO:0015318,GO:0015368,GO:0015491,GO:0015672,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0035725,GO:0042592,GO:0043167,GO:0043169,GO:0046872,GO:0046873,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055074,GO:0055080,GO:0055085,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0072507,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0099516
Exons1
Evalue1.1e-62
EggNOG OGsCOG5126@1|root,KOG0027@2759|Eukaryota
DescriptionCalcium-binding protein
Cds size654
COG categoryDTZ
BRITEko00000,ko00001,ko01009,ko03036,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186015.0658028-UTR-P-wetherbeei_contig1425:6419..64221683186015.0658028-UTR-P-wetherbeei_contig1425:6419..6422Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1425 6420..6422 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186015.0744383-CDS-P-wetherbeei_contig1425:6422..70761683186015.0744383-CDS-P-wetherbeei_contig1425:6422..7076Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1425 6423..7076 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1425.6.1prot_P-wetherbeei_contig1425.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1425 6423..7076 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1425.6.1

>prot_P-wetherbeei_contig1425.6.1 ID=prot_P-wetherbeei_contig1425.6.1|Name=mRNA_P-wetherbeei_contig1425.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp
MAAVVGGPAPAAPELSRASRTRLSRHGFADVMQDSVDGHTDPTGRAADLD
LEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERME
LRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRENRYGRDEPSL
ALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRP
LLRQRRPVVKLAREYEVI
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mRNA from alignment at P-wetherbeei_contig1425:6420..7076+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1425.6.1 ID=mRNA_P-wetherbeei_contig1425.6.1|Name=mRNA_P-wetherbeei_contig1425.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=657bp|location=Sequence derived from alignment at P-wetherbeei_contig1425:6420..7076+ (Phaeothamnion wetherbeei SAG_119_79)
CCCATGGCGGCCGTCGTCGGCGGTCCGGCGCCGGCCGCCCCCGAGCTCTC CCGCGCCTCGCGCACCCGCCTGAGCCGTCACGGTTTCGCCGACGTCATGC AGGACTCCGTGGACGGCCATACGGATCCGACGGGACGTGCAGCGGACCTC GATCTGGAGGCGACGGACCCGCTGGCGCTGCACGAGCTGACGCTGCAGTT CGCGGGGCTGCGCGCACCACGTTCCGACGCGCCGCTGCCGGAGAGCGTCT ACTTTACCTACCAGCTCTGGAACTGCCAGCCAGTGAAGACGGAGCGCATG GAGCTCCGCCCGACGGCCGGCGGCCGGCGAAATAGCAGCGGCGGCTATTC CGGCAGCGGCGACGCCCCATACCGGCCGGACAGCGGCGCCGGCGCGGCCG AGCTGCGGATCCTCGTCCGAGAGAATCGCTACGGCCGCGATGAGCCGTCG CTGGCGTTGCGCCACTCCGTCGACACGACACTGCTGCAGCCGTTCGAGGC CGAGGCGTTCGCGGCCTACCTGGCCTGCCGCACGCTCTACGTTGACGTCT GGGACGGCGACGCGCTCATGCACCTGGGCACGATGGCGGTGTCGCTGCGG CCCCTGCTGCGCCAACGCCGGCCGGTCGTCAAGCTGGCGCGCGAGTACGA GGTAATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1425:6420..7076+

>mRNA_P-wetherbeei_contig1425.6.1 ID=mRNA_P-wetherbeei_contig1425.6.1|Name=mRNA_P-wetherbeei_contig1425.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=654bp|location=Sequence derived from alignment at P-wetherbeei_contig1425:6420..7076+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGCCGTCGTCGGCGGTCCGGCGCCGGCCGCCCCCGAGCTCTCCCG
CGCCTCGCGCACCCGCCTGAGCCGTCACGGTTTCGCCGACGTCATGCAGG
ACTCCGTGGACGGCCATACGGATCCGACGGGACGTGCAGCGGACCTCGAT
CTGGAGGCGACGGACCCGCTGGCGCTGCACGAGCTGACGCTGCAGTTCGC
GGGGCTGCGCGCACCACGTTCCGACGCGCCGCTGCCGGAGAGCGTCTACT
TTACCTACCAGCTCTGGAACTGCCAGCCAGTGAAGACGGAGCGCATGGAG
CTCCGCCCGACGGCCGGCGGCCGGCGAAATAGCAGCGGCGGCTATTCCGG
CAGCGGCGACGCCCCATACCGGCCGGACAGCGGCGCCGGCGCGGCCGAGC
TGCGGATCCTCGTCCGAGAGAATCGCTACGGCCGCGATGAGCCGTCGCTG
GCGTTGCGCCACTCCGTCGACACGACACTGCTGCAGCCGTTCGAGGCCGA
GGCGTTCGCGGCCTACCTGGCCTGCCGCACGCTCTACGTTGACGTCTGGG
ACGGCGACGCGCTCATGCACCTGGGCACGATGGCGGTGTCGCTGCGGCCC
CTGCTGCGCCAACGCCGGCCGGTCGTCAAGCTGGCGCGCGAGTACGAGGT
AATC
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