mRNA_P-wetherbeei_contig14249.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14249.1.1 vs. uniprot
Match: D7G922_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G922_ECTSI) HSP 1 Score: 137 bits (344), Expect = 8.350e-34 Identity = 118/280 (42.14%), Postives = 142/280 (50.71%), Query Frame = 1
Query: 1 LHNDKDDMALEISASN-DLSEAGAAGRGPGRKELVLRXXXXXXXXXXXXXXXXPSADFDGAKQLAGARPSGASGGHAXXXXXXXXXXXXXXXKGGVMPVKNDQFDAALELSSNDGGSSIDTH-SDDEHSPQKRSIAIPQSTSSAGITGRTGASVASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGMVKLEGAYNPDDYANLNVGADIKDLFHYIQRYKPHEVDLETSLKCFVPDYIPAVGDMDAFVKVPRPDGKTDDLGLKV 834
L NDK D+ALE+SAS D G+ G G + S D A AR G+S VKNDQFDAA +LSS D SS+DT + D + Q+R+I P ++ T + V S XXXXXXXXXXXXX S +K+EGAY+P DYA+LNV A+IKDLF YI RYK HEVDL+TSL+CFVPD+IPAVGDMDAF+KVPRPD D+LG KV
Sbjct: 32 LQNDKYDLALEVSASEADALGDGSPGEEKGERASGSDSPDARIGAAADRLGLGSSTD---APSREAARGRGSSSAQETG-----------------QDVKNDQFDAAYDLSSADEESSVDTREAADLATTQRRTIGAPPASERRPSLTATPSPVPSGTVASAVAGLSSSTMHPGGGGSDGXXXXXXXXXXXXXNGDER---SNPIKIEGAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDQNPDELGFKV 288
BLAST of mRNA_P-wetherbeei_contig14249.1.1 vs. uniprot
Match: A0A7S2V5L8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5L8_9STRA) HSP 1 Score: 131 bits (330), Expect = 4.320e-33 Identity = 59/76 (77.63%), Postives = 69/76 (90.79%), Query Frame = 1
Query: 607 VKLEGAYNPDDYANLNVGADIKDLFHYIQRYKPHEVDLETSLKCFVPDYIPAVGDMDAFVKVPRPDGKTDDLGLKV 834
VK+EGAYN DY +LNVG +I++LF YIQRYKPHEV+LET+LKCF+PDYIPAVG+MDAF+KVPRPD K DDLGLKV
Sbjct: 46 VKVEGAYNASDYVHLNVGGEIQELFQYIQRYKPHEVELETTLKCFIPDYIPAVGEMDAFLKVPRPDDKQDDLGLKV 121
BLAST of mRNA_P-wetherbeei_contig14249.1.1 vs. uniprot
Match: A0A835YT86_9STRA (Intraflagellar transport complex B protein 46 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT86_9STRA) HSP 1 Score: 125 bits (314), Expect = 4.670e-31 Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1
Query: 616 EGAYNPDDYANLNVGADIKDLFHYIQRYKPHEVDLETSLKCFVPDYIPAVGDMDAFVKVPRPDGKTDDLGLKV 834
EGAYNP DYA+L+V A+++DLF YI RYKPH+V+LET+LKCFVPDYIP +G+MDAF+KVPRPDGK DDLG KV
Sbjct: 22 EGAYNPADYAHLSVAAEVRDLFQYIVRYKPHDVELETTLKCFVPDYIPTLGEMDAFLKVPRPDGKADDLGFKV 94
BLAST of mRNA_P-wetherbeei_contig14249.1.1 vs. uniprot
Match: A0A8J2SVY8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVY8_9STRA) HSP 1 Score: 126 bits (316), Expect = 5.170e-30 Identity = 56/75 (74.67%), Postives = 69/75 (92.00%), Query Frame = 1
Query: 610 KLEGAYNPDDYANLNVGADIKDLFHYIQRYKPHEVDLETSLKCFVPDYIPAVGDMDAFVKVPRPDGKTDDLGLKV 834
++EGAYNPDDYA+LNV AD++DLF YI RY HEV+LE++LKCFVPDYIPAVG+MDAF+KVPRPDG+ D+LGL+V
Sbjct: 183 EVEGAYNPDDYADLNVSADVRDLFQYIGRYAAHEVELESTLKCFVPDYIPAVGEMDAFLKVPRPDGQKDNLGLQV 257
BLAST of mRNA_P-wetherbeei_contig14249.1.1 vs. uniprot
Match: A0A812SNF8_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SNF8_SYMMI) HSP 1 Score: 120 bits (301), Expect = 3.540e-29 Identity = 49/74 (66.22%), Postives = 66/74 (89.19%), Query Frame = 1
Query: 613 LEGAYNPDDYANLNVGADIKDLFHYIQRYKPHEVDLETSLKCFVPDYIPAVGDMDAFVKVPRPDGKTDDLGLKV 834
+EGAYNP DY +LNV A+++DLF YI+RYKPHEV+L+T+LKCF+P++IPA+G++D FVKVPRPDG+ D LG K+
Sbjct: 25 IEGAYNPKDYQHLNVAAEVRDLFQYIERYKPHEVELDTTLKCFIPEFIPAIGEIDGFVKVPRPDGEDDGLGFKI 98
BLAST of mRNA_P-wetherbeei_contig14249.1.1 vs. uniprot
Match: F0YHZ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHZ8_AURAN) HSP 1 Score: 119 bits (297), Expect = 1.500e-28 Identity = 51/74 (68.92%), Postives = 66/74 (89.19%), Query Frame = 1
Query: 613 LEGAYNPDDYANLNVGADIKDLFHYIQRYKPHEVDLETSLKCFVPDYIPAVGDMDAFVKVPRPDGKTDDLGLKV 834
+EGAYN DY++LNV AD++DLF YI RY HEV+L+++LKCF+PDYIPAVG+MDAF+KVPRPDG+ D+LGL+V
Sbjct: 31 VEGAYNAKDYSDLNVSADVRDLFQYIGRYNAHEVELDSTLKCFIPDYIPAVGEMDAFIKVPRPDGERDELGLQV 104
BLAST of mRNA_P-wetherbeei_contig14249.1.1 vs. uniprot
Match: A0A7S2C2T6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C2T6_9STRA) HSP 1 Score: 122 bits (305), Expect = 3.660e-28 Identity = 53/76 (69.74%), Postives = 67/76 (88.16%), Query Frame = 1
Query: 607 VKLEGAYNPDDYANLNVGADIKDLFHYIQRYKPHEVDLETSLKCFVPDYIPAVGDMDAFVKVPRPDGKTDDLGLKV 834
++ +GAYNPDDY +L V A+IKDLF YI RYKPHEV+L+++LKCF+P+YIPAVG+MDAF+KVP PDG DDLGLK+
Sbjct: 216 MRPDGAYNPDDYKHLPVSAEIKDLFQYIGRYKPHEVELDSTLKCFIPEYIPAVGEMDAFIKVPAPDGSQDDLGLKM 291
BLAST of mRNA_P-wetherbeei_contig14249.1.1 vs. uniprot
Match: A0A7S2SRL5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRL5_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.580e-27 Identity = 53/75 (70.67%), Postives = 67/75 (89.33%), Query Frame = 1
Query: 610 KLEGAYNPDDYANLNVGADIKDLFHYIQRYKPHEVDLETSLKCFVPDYIPAVGDMDAFVKVPRPDGKTDDLGLKV 834
++EGAY+PDD+ +LNV ++IKDLF+YI RYKPH+VDL+++L+CFVPDYIPAVG+MDAFVKV PD DDLGLKV
Sbjct: 232 RVEGAYDPDDFKHLNVSSEIKDLFNYITRYKPHDVDLDSTLRCFVPDYIPAVGEMDAFVKVTPPDSSRDDLGLKV 306
BLAST of mRNA_P-wetherbeei_contig14249.1.1 vs. uniprot
Match: A0A7S4D854_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D854_HETAK) HSP 1 Score: 114 bits (286), Expect = 3.660e-27 Identity = 51/76 (67.11%), Postives = 65/76 (85.53%), Query Frame = 1
Query: 607 VKLEGAYNPDDYANLNVGADIKDLFHYIQRYKPHEVDLETSLKCFVPDYIPAVGDMDAFVKVPRPDGKTDDLGLKV 834
VK+EGAY+P+DY L+V AD+K+LF YI R+KP E DLET+L+ FVPDYIP+VG+MD F+KVPRPDG D++GLKV
Sbjct: 34 VKVEGAYDPNDYLTLHVSADVKELFQYITRFKPQEPDLETALRPFVPDYIPSVGEMDVFLKVPRPDGAPDEMGLKV 109
BLAST of mRNA_P-wetherbeei_contig14249.1.1 vs. uniprot
Match: A0A7S2B4U7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B4U7_9STRA) HSP 1 Score: 119 bits (298), Expect = 5.230e-27 Identity = 51/76 (67.11%), Postives = 67/76 (88.16%), Query Frame = 1
Query: 607 VKLEGAYNPDDYANLNVGADIKDLFHYIQRYKPHEVDLETSLKCFVPDYIPAVGDMDAFVKVPRPDGKTDDLGLKV 834
++++GAYN +D+ +L V A+IKDLF YIQRYKPHEV+L+T+LKCF+PD+IPAVG+MDAF+KVP PD D+LGLKV
Sbjct: 252 IQVDGAYNANDFKHLQVSAEIKDLFQYIQRYKPHEVELDTTLKCFIPDFIPAVGEMDAFIKVPSPDAARDELGLKV 327 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14249.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14249.1.1 >prot_P-wetherbeei_contig14249.1.1 ID=prot_P-wetherbeei_contig14249.1.1|Name=mRNA_P-wetherbeei_contig14249.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp MALEISASNDLSEAGAAGRGPGRKELVLRNDKFDEALDVSASMDMPSADFback to top mRNA from alignment at P-wetherbeei_contig14249:2..1433+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14249.1.1 ID=mRNA_P-wetherbeei_contig14249.1.1|Name=mRNA_P-wetherbeei_contig14249.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1432bp|location=Sequence derived from alignment at P-wetherbeei_contig14249:2..1433+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14249:2..1433+ >mRNA_P-wetherbeei_contig14249.1.1 ID=mRNA_P-wetherbeei_contig14249.1.1|Name=mRNA_P-wetherbeei_contig14249.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig14249:2..1433+ (Phaeothamnion wetherbeei SAG_119_79)back to top |