prot_P-wetherbeei_contig14241.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14241.1.1
Unique Nameprot_P-wetherbeei_contig14241.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length434
Homology
BLAST of mRNA_P-wetherbeei_contig14241.1.1 vs. uniprot
Match: A0A7S2WLH8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLH8_9STRA)

HSP 1 Score: 138 bits (348), Expect = 8.180e-32
Identity = 127/454 (27.97%), Postives = 191/454 (42.07%), Query Frame = 0
Query:    1 RKNFKDWQEESRWNLKVLGLTLPTLEAPTVVGCGRDSCTVRWVCSFAKRPQDTTTLGFNVTWAAAAANASLALRRLSGHAAVNADTGDPHLSAEPATDHALLAAGITDAVRYTLRVGGGGALLPGSLYSFAVALIYGDVAGPPSAFSKAVRTAAVTAPXXXXXXXXXXXXXXXT-----AGRPLSVRLAVPLPADDGGAPLEGIHVMLRSVGEHVPQGWHVIGVYPGGGTVGGGDXXXXXTIGTIGIGRSKLSIDVANLLPGVTYQFKFCLQNRIGTSPWSAPSEPVTLPAPAPGGASPHLGELAGFHSGGGGGPHVVPLPNVSDPRVYYAVAGSALPGRGFDPFER----EVHGPVVTVDDRAGTVTAPDLEFEEYDDTSXXXXXXXXXXGGFKKYLPVWAGHWSPRAFLVTAEAVEADPF-----------DAAVPLRNAALLRGRVAIVGR 434
            R++ KDWQ E+RW  +V+GLTLPTL  PT++  GR + T+ W+  F  +  D+T  G+N+TW    +      R ++G   V+ +  +   + +    H L  + + +             L P   Y+F + + YG+ + P SA S+ V T A++AP                      G  LS+ +A P P DDGGA ++G  V  R V E +   W  +G +P               +   G    +L+ ++ +LLP   Y+F+    N+IG +     S   T P              AG    GG G   +PL +  +    +    +A               EVHGPVVT+ D   TVT   LE                   G    LPVW  HWSP+A+ VTAE +  DP                PL NAA ++ R+A++ R
Sbjct:  207 RRSQKDWQAETRWKWRVIGLTLPTLSPPTILDVGRRNVTLGWLSGFLVKAGDSTAYGYNITWHRGHS------REVAGWKQVSHEQVEVQHAYDDYHVHDLTYSLVDE-------------LEPDVSYTFRIMVYYGETSSPSSASSRIVHTPALSAPSRMESPPVLWRRPSKQDKGKLTGTKLSI-VASP-PVDDGGADVKGFIVQRRHVQEEMHDDWVTLGSFP--------IHWVDHVVSDDGATEHRLAFELDHLLPNCDYEFRIAAYNKIGVAAPGTGSRLRTNPV-----------SRAGEEVVGGSGHRSMPLHHFRELDEDFHTDSAAEVREHLKALHSSTFFEVHGPVVTLSDLLQTVT---LE-----------------KPGTGLTLPVWVSHWSPKAYKVTAEVIVTDPPMGDLSEPNKLPSTRTPLHNAATVQHRIALMER 600          
BLAST of mRNA_P-wetherbeei_contig14241.1.1 vs. uniprot
Match: A0A7S3UWA2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWA2_HETAK)

HSP 1 Score: 90.9 bits (224), Expect = 1.010e-16
Identity = 79/252 (31.35%), Postives = 98/252 (38.89%), Query Frame = 0
Query:  188 PADDGGAPLEGIHVMLRSVGEHVPQGWHVIGVYPGGGTVGGGDXXXXXTIGTIGIGRSKLSIDVANLLPGVTYQFKFCLQNRIGTSPWSAPSEPVTLPAPAPGGASPHLGELAGFHSGGGGGPHVV-----PLPNVSDPRVYYAVAGSALPGRGFDPFEREVHGPVVTVDDRAGTVTAPDLEFEEYDDTSXXXXXXXXXXGGFKKYLPVWAGHWSPRAFLVTAEAVEADPFDAAVPLRNAALLRGRVAIVGR 434
            P DDGG P+ G H+M     EH    W  +G +                          L   V +LLPG  Y FK   +   G   WSAPS P   P P          +  G  +GG G  HV      P+ + S  +  +                 + HGPVVT+ D         LE                  GG    +  W   WSP+AF VTAEAV ADPF A  PLRN A+LR R+A+VGR
Sbjct:   11 PEDDGGEPITGYHLMKLHTDEHTHDDWEFLGTF----------------FPNFDPNMGGLCHTVPHLLPGTAYSFKVAARTAAGDGLWSAPSPPARTPLPQ------LEVDPKGKVTGGTG--HVYGRGWDPITHTSFKKDMFEAPLHLETHSSDKKTSYDQHGPVVTLHDHEAR-----LEVRR-------------GGGGPAVAVAAWTCAWSPQAFSVTAEAVRADPFLADRPLRNKAVLRKRLALVGR 220          
BLAST of mRNA_P-wetherbeei_contig14241.1.1 vs. uniprot
Match: A0A5D6YD54_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD54_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.160e-16
Identity = 139/496 (28.02%), Postives = 183/496 (36.90%), Query Frame = 0
Query:    1 RKNFKDWQEESRWNLKVLGLTLPTLEAPTVVGCGRDSCTVRWVCSFAKRPQDTTTLGFNVTWAAAAANASLALRRLSGHAAVNADTGDPHLSAEPAT--------DHALLAAGIT-------DAVRYTLRVGGGGALLPGSLYSFAVALIYGDVAGPPSAFSKAVRTAAVTAPXXXXXXXXXXXXXXXTAGRPLSVRLAVPLPADDGGAPLEGIHVMLRSV-GEHVPQGWHVIGVYPGGGT----VGGGDXXXXXT-----------IGTIGIGRSKLSIDVANLL-PGVTYQFKFCLQNRIGTSPWSAPSEPVTLPAPAPGGA------------SPHLGELAGFHSGGGGGPHVVPLPNVSDPRVYYAVA--GS----ALPGRGFDPFEREVHGPVVTVDD---RAGTVTAPDLEFEEYDDTSXXXXXXXXXXGGFKKYLP---------VWAGHWSPRAFLVTAEAVEADPFDAAVPLRNAALLRGRVAIVGR 434
            R+  K WQ++ RW+  V  LTLP    P VV   R + T+R+   +     D T  G+ V W        LA  R       +   GD      P +         H + +A  T       D     + V G   L   + Y+F+V +   D +G  S  S+ V+TA  + P                +G   ++R   P  ADDGG P+    V  R V G+    G    G      T    + G       T                 G    S  V  LL PG TY F+    N IG  PWS+PS+PV LP  A   A            S  +G        G G PH VP+   S   +   VA  GS    A      DP      GP V + D   R     A   +     +T                  P         VWA H+SPRAF V+AE V A+P DA+ PLRNAA ++ RV +V R
Sbjct:  475 RERLKQWQDDKRWDRHVEALTLPVSLPPVVVNTTRTTATLRFQDLYEPLKHDITAYGYVVRWRNIDDELVLAAARSDRVRDTSEPRGDAESEPPPLSVNEMNVTRRHLMRSALPTTLFGDDFDGKDIEVVVRG---LSAETRYAFSVQIYVDDTSGLESDSSRIVQTAPCSEPGGVRGVPTASELD---SGACATLRWLGP--ADDGGKPVRLFLVSARIVNGDRESSGTAADGAGAAVATAVAALAGSHNATRATEDEKVFALDARFAARHAGGKWRSAAVCTLLVPGSTYLFRVAAMNSIGAGPWSSPSDPVELPPSASHHAQIGVAATSRRSLSASVGSTVVPTLKGRGDPHYVPMRAFSMRELADLVAAHGSEAVIATVAETEDPQRPGGVGPAVLLSDVIERIVVSVASKFKIRSEGETQPELTPDAAASSTTANANPEQQQQLAFDVWASHFSPRAFHVSAEMVRAEPLDASTPLRNAAQVKDRVVLVAR 962          
BLAST of mRNA_P-wetherbeei_contig14241.1.1 vs. uniprot
Match: D8LI37_ECTSI (PA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI37_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.370e-15
Identity = 55/138 (39.86%), Postives = 70/138 (50.72%), Query Frame = 0
Query:  299 LAGFHSGGGGGPHVVPLPNVSDPRVYYAVAGSALPGRGFDPFEREVHGPVVTVDDRAGT--VTAPDLEFEEYDDTSXXXXXXXXXXGGFKKYLPVWAGHWSPRAFLVTAEAVEADPFDAAVPLRNAALLRGRVAIVGR 434
            ++GFH+G       + LPNV+D  V YA      PG GFDPFEREVHGP V +DDRA    V + +  FE+ D                     VW  H+SPR+F V +E V A P DA   L N   +R R+ +V R
Sbjct:    1 MSGFHAGH----EHLRLPNVTDVSVTYAGETEPPPGAGFDPFEREVHGPTVVLDDRASKIRVASNNSAFEDID---------------------VWTCHFSPRSFKVKSEVVVAQPADARSELENGRFVRNRIVVVQR 113          
BLAST of mRNA_P-wetherbeei_contig14241.1.1 vs. uniprot
Match: A0A836CBI4_9STRA (PA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 7.550e-11
Identity = 54/123 (43.90%), Postives = 62/123 (50.41%), Query Frame = 0
Query:  314 PLPNVSDPRVYYAVAGSALPGRGFDPF-EREVHGPVVTVDDRAGTVTAPDLEFEEYDDTSXXXXXXXXXXGGFKKYLPVWAGHWSPRAFLVTAEAVEADPFDAAVP-LRNAALLRGRVAIVGR 434
            PLP   DP V YA  G A P  G     ER   GP VT+D     V   D                    GG    +PVWAGH+SPR  LVTAE + ADP DAA P LRNA+ +RGR+A+V R
Sbjct:   12 PLPTPRDPAVRYADFGGA-PIVGLHAHAERMARGPTVTLDAARERVHVAD-----------DRGPLAIALGGAD--VPVWAGHFSPRTHLVTAELIPADPPDAAAPELRNASFVRGRIALVTR 120          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14241.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A7S2WLH8_9STRA8.180e-3227.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3UWA2_HETAK1.010e-1631.35Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A5D6YD54_9STRA2.160e-1628.02Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
D8LI37_ECTSI1.370e-1539.86PA domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A836CBI4_9STRA7.550e-1143.90PA domain-containing protein (Fragment) n=1 Tax=Tr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 154..295
e-value: 5.7E-11
score: 44.6
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 161..287
score: 10.20156
IPR003961Fibronectin type IIICDDcd00063FN3coord: 245..283
e-value: 8.4769E-4
score: 36.3203
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 29..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14241contigP-wetherbeei_contig14241:42..1586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14241.1.1mRNA_P-wetherbeei_contig14241.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14241 42..1586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14241.1.1 ID=prot_P-wetherbeei_contig14241.1.1|Name=mRNA_P-wetherbeei_contig14241.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=434bp
RKNFKDWQEESRWNLKVLGLTLPTLEAPTVVGCGRDSCTVRWVCSFAKRP
QDTTTLGFNVTWAAAAANASLALRRLSGHAAVNADTGDPHLSAEPATDHA
LLAAGITDAVRYTLRVGGGGALLPGSLYSFAVALIYGDVAGPPSAFSKAV
RTAAVTAPRAPPRAPEADASAAATAGRPLSVRLAVPLPADDGGAPLEGIH
VMLRSVGEHVPQGWHVIGVYPGGGTVGGGDGGGGGTIGTIGIGRSKLSID
VANLLPGVTYQFKFCLQNRIGTSPWSAPSEPVTLPAPAPGGASPHLGELA
GFHSGGGGGPHVVPLPNVSDPRVYYAVAGSALPGRGFDPFEREVHGPVVT
VDDRAGTVTAPDLEFEEYDDTSDSSGSGSSGGGGFKKYLPVWAGHWSPRA
FLVTAEAVEADPFDAAVPLRNAALLRGRVAIVGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR003961FN3_dom
IPR036116FN3_sf