mRNA_P-wetherbeei_contig14236.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14236.2.1
Unique NamemRNA_P-wetherbeei_contig14236.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14236.2.1 vs. uniprot
Match: A0A3D5DJC4_9GAMM (4HBT domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DJC4_9GAMM)

HSP 1 Score: 152 bits (385), Expect = 3.590e-45
Identity = 73/128 (57.03%), Postives = 99/128 (77.34%), Query Frame = 1
Query:   19 IERVRYIAAGQHFARHLSIEVVSIEVDRAVLRLPYREYLGIERVNGGAIASLVDLAGTCACWSNPLVSEAARGATIGFTINYLKLVVASDLIASGQVRRRGGSLCVAEVSVCNEAGDEVAIATINYKL 402
            +E+V+ +A    F++HL +++V  E DR +L+LPY EYLG++RV GGAI++LVD+A +CA WSN  VS  +RGATIGFTIN+L+LV   D+ A+  VRRRGGS+CVA+VSV N  G+EVAIA + YKL
Sbjct:    2 LEQVKELAEEFRFSQHLGVKLVLAETDRVILQLPYNEYLGVDRVGGGAISALVDIAASCAFWSNDSVSIDSRGATIGFTINFLRLVTGEDIWATSTVRRRGGSICVADVSVRNRDGEEVAIAVVTYKL 129          
BLAST of mRNA_P-wetherbeei_contig14236.2.1 vs. uniprot
Match: A0A2E6A5F8_9GAMM (4HBT domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6A5F8_9GAMM)

HSP 1 Score: 146 bits (368), Expect = 1.460e-42
Identity = 70/120 (58.33%), Postives = 89/120 (74.17%), Query Frame = 1
Query:   43 AGQHFARHLSIEVVSIEVDRAVLRLPYREYLGIERVNGGAIASLVDLAGTCACWSNPLVSEAARGATIGFTINYLKLVVASDLIASGQVRRRGGSLCVAEVSVCNEAGDEVAIATINYKL 402
            A + FA HL  E+   E DR V+RLPYRE+LG+ R++GGAI++LVD+A T A WS P + + ARGAT+GFTIN+LKL VA+DL A   VRRRGG++C   VSV N  GDEVA+A + YKL
Sbjct:   12 AREGFANHLGAELAEAETDRVVVRLPYREHLGVGRIHGGAISALVDIAATAAFWSYPDLPDTARGATVGFTINFLKLAVATDLSAEATVRRRGGTICTGNVSVTNADGDEVAVAVVTYKL 131          
BLAST of mRNA_P-wetherbeei_contig14236.2.1 vs. uniprot
Match: A0A2E4UR59_9GAMM (4HBT domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E4UR59_9GAMM)

HSP 1 Score: 146 bits (368), Expect = 1.460e-42
Identity = 70/120 (58.33%), Postives = 88/120 (73.33%), Query Frame = 1
Query:   43 AGQHFARHLSIEVVSIEVDRAVLRLPYREYLGIERVNGGAIASLVDLAGTCACWSNPLVSEAARGATIGFTINYLKLVVASDLIASGQVRRRGGSLCVAEVSVCNEAGDEVAIATINYKL 402
            A + FA HL  E+     DR V+ LPYRE+LG+ R++GGAI++LVD+A T A WS+P + E ARGAT+GFTIN+LKL VA+DL A   VRRRGGS+C   VSV N  GDEVA+A + YKL
Sbjct:   12 AREGFANHLGAELAEAGTDRVVVSLPYREHLGVGRIHGGAISALVDIAATAAFWSHPDIPETARGATVGFTINFLKLAVATDLAAEATVRRRGGSICTGNVSVTNAEGDEVAVAVVTYKL 131          
BLAST of mRNA_P-wetherbeei_contig14236.2.1 vs. uniprot
Match: A0A2E2YQS5_9GAMM (4HBT domain-containing protein n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E2YQS5_9GAMM)

HSP 1 Score: 139 bits (351), Expect = 5.600e-40
Identity = 66/127 (51.97%), Postives = 93/127 (73.23%), Query Frame = 1
Query:   22 ERVRYIAAGQHFARHLSIEVVSIEVDRAVLRLPYREYLGIERVNGGAIASLVDLAGTCACWSNPLVSEAARGATIGFTINYLKLVVASDLIASGQVRRRGGSLCVAEVSVCNEAGDEVAIATINYKL 402
            +RV  IA  ++FA HL +E++    D  V ++PY++ LG+ R++GGAI++L+D+A T A WS+P ++E +RGAT+GFTINYLKL + +DL A+  VRRRGG+LC   V V N  GDEVAIA + YKL
Sbjct:    6 QRVMSIAT-ENFAAHLGVELIDATTDXVVAKMPYKKELGVGRIHGGAISALIDIAATAAFWSHPNINEESRGATVGFTINYLKLAIDTDLTATAYVRRRGGTLCTGXVDVVNXEGDEVAIARVTYKL 131          
BLAST of mRNA_P-wetherbeei_contig14236.2.1 vs. uniprot
Match: A0A6L7MSP3_9GAMM (PaaI family thioesterase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7MSP3_9GAMM)

HSP 1 Score: 137 bits (345), Expect = 5.470e-39
Identity = 66/120 (55.00%), Postives = 92/120 (76.67%), Query Frame = 1
Query:   43 AGQHFARHLSIEVVSIEVDRAVLRLPYREYLGIERVNGGAIASLVDLAGTCACWSNPLVSEAARGATIGFTINYLKLVVASDLIASGQVRRRGGSLCVAEVSVCNEAGDEVAIATINYKL 402
            A ++FA  L  E+VS E DR V+RLP+R  LG+ R++GGAI++L+D+A T A WS+P V+  +RGAT+GFT+N+L L VA+DL A+  VRRRGG+LC  +VSV N +G+EVA+A + YKL
Sbjct:   11 ATENFAALLGTELVSQETDRVVVRLPWRPDLGVGRIHGGAISALIDIAATAAFWSSPDVTLGSRGATVGFTVNFLNLAVATDLTATATVRRRGGTLCTGDVSVTNASGEEVAMAVVTYKL 130          
BLAST of mRNA_P-wetherbeei_contig14236.2.1 vs. uniprot
Match: A0A2E5DCD5_9GAMM (4HBT domain-containing protein n=6 Tax=root TaxID=1 RepID=A0A2E5DCD5_9GAMM)

HSP 1 Score: 135 bits (340), Expect = 2.700e-38
Identity = 68/127 (53.54%), Postives = 93/127 (73.23%), Query Frame = 1
Query:   22 ERVRYIAAGQHFARHLSIEVVSIEVDRAVLRLPYREYLGIERVNGGAIASLVDLAGTCACWSNPLVSEAARGATIGFTINYLKLVVASDLIASGQVRRRGGSLCVAEVSVCNEAGDEVAIATINYKL 402
            +RV  IA  + FA  L I +V    D  V+R+PYR  LG+ R++GGAI++L+D+A T + WS+P + E A GAT+GFT+N+LKL V SDL A+ +VRRRGG+LC  +V+V NEAGDEVA+A + YKL
Sbjct:    7 QRVARIAT-ESFADLLGIRLVXNRPDHVVVRMPYRTELGVGRIHGGAISALIDVAATASFWSDPNLKETAIGATVGFTVNFLKLAVNSDLTATARVRRRGGTLCTGDVTVTNEAGDEVAMAVVTYKL 132          
BLAST of mRNA_P-wetherbeei_contig14236.2.1 vs. uniprot
Match: A0A6B0YAV6_9GAMM (PaaI family thioesterase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6B0YAV6_9GAMM)

HSP 1 Score: 137 bits (345), Expect = 3.380e-38
Identity = 67/120 (55.83%), Postives = 92/120 (76.67%), Query Frame = 1
Query:   43 AGQHFARHLSIEVVSIEVDRAVLRLPYREYLGIERVNGGAIASLVDLAGTCACWSNPLVSEAARGATIGFTINYLKLVVASDLIASGQVRRRGGSLCVAEVSVCNEAGDEVAIATINYKL 402
            A + FA  + +E+V  + DR V+RLPY+  LG+ R++GGAI++LVD+A T A WS P V+ A++GAT+GFTIN+LKL V +DLIA+  VRRRGG+LC  +VSV N+AG+EVA A + YKL
Sbjct:   74 AKESFAALIGVELVEHDEDRVVVRLPYQSKLGVGRIHGGAISALVDIAATAAFWSCPDVTPASQGATVGFTINFLKLAVRTDLIATATVRRRGGTLCTGDVSVRNDAGEEVATAMVTYKL 193          
BLAST of mRNA_P-wetherbeei_contig14236.2.1 vs. uniprot
Match: A0A6B1HJQ3_9GAMM (PaaI family thioesterase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6B1HJQ3_9GAMM)

HSP 1 Score: 135 bits (340), Expect = 4.370e-38
Identity = 66/120 (55.00%), Postives = 91/120 (75.83%), Query Frame = 1
Query:   43 AGQHFARHLSIEVVSIEVDRAVLRLPYREYLGIERVNGGAIASLVDLAGTCACWSNPLVSEAARGATIGFTINYLKLVVASDLIASGQVRRRGGSLCVAEVSVCNEAGDEVAIATINYKL 402
            A + FA  + +E+V  E D  V+RLPY+  LG+ R++GGAI++LVD+A T A WS P V+  ++GAT+GFTIN+LKL VA+DL+A+  VRRRGG+LC  +VSV N+AG+EVA A + YKL
Sbjct:   11 AKESFASLMGVELVEHEEDWVVVRLPYQRKLGVGRIHGGAISALVDIAATAAFWSCPDVTPTSQGATVGFTINFLKLAVATDLVATATVRRRGGTLCTGDVSVRNDAGEEVAAAMVTYKL 130          
BLAST of mRNA_P-wetherbeei_contig14236.2.1 vs. uniprot
Match: A0A523MFD5_9GAMM (PaaI family thioesterase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523MFD5_9GAMM)

HSP 1 Score: 133 bits (334), Expect = 2.130e-37
Identity = 65/119 (54.62%), Postives = 86/119 (72.27%), Query Frame = 1
Query:   46 GQHFARHLSIEVVSIEVDRAVLRLPYREYLGIERVNGGAIASLVDLAGTCACWSNPLVSEAARGATIGFTINYLKLVVASDLIASGQVRRRGGSLCVAEVSVCNEAGDEVAIATINYKL 402
            G  FA  L IE+VS  VDR V+R+PY+E +G +RV+GGAI++LVD+A T A WS+P +   A+GAT+GFTIN+L L    DL A+  VRRRGG +C  +VSVC+  G EVA+A + YKL
Sbjct:   13 GGGFAELLGIELVSQRVDRVVVRMPYKEAIGSDRVHGGAISALVDIAATAAFWSHPDIGADAQGATVGFTINFLNLARKVDLTANATVRRRGGQICTGDVSVCDATGREVAVARVTYKL 131          
BLAST of mRNA_P-wetherbeei_contig14236.2.1 vs. uniprot
Match: A0A6L7XSW1_9GAMM (PaaI family thioesterase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7XSW1_9GAMM)

HSP 1 Score: 134 bits (338), Expect = 3.450e-37
Identity = 66/120 (55.00%), Postives = 90/120 (75.00%), Query Frame = 1
Query:   43 AGQHFARHLSIEVVSIEVDRAVLRLPYREYLGIERVNGGAIASLVDLAGTCACWSNPLVSEAARGATIGFTINYLKLVVASDLIASGQVRRRGGSLCVAEVSVCNEAGDEVAIATINYKL 402
            A ++FA  L  E+VS E DR V+RLP+R  LG+ R++GGAI++L+D+A T A WS+P V+  +RGAT+GFT+N+L L VA+DL A   VRRRGG+LC  +VSV N  G+EVA+A + YKL
Sbjct:   69 ATENFAALLGTELVSQETDRVVVRLPWRPDLGVGRIHGGAISALIDVAATAAFWSSPDVTLDSRGATVGFTVNFLNLAVATDLTAIATVRRRGGTLCTGDVSVTNAGGEEVAMAVVTYKL 188          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14236.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DJC4_9GAMM3.590e-4557.034HBT domain-containing protein n=1 Tax=Gammaproteo... [more]
A0A2E6A5F8_9GAMM1.460e-4258.334HBT domain-containing protein n=1 Tax=Gammaproteo... [more]
A0A2E4UR59_9GAMM1.460e-4258.334HBT domain-containing protein n=1 Tax=Gammaproteo... [more]
A0A2E2YQS5_9GAMM5.600e-4051.974HBT domain-containing protein n=3 Tax=Gammaproteo... [more]
A0A6L7MSP3_9GAMM5.470e-3955.00PaaI family thioesterase n=1 Tax=Gammaproteobacter... [more]
A0A2E5DCD5_9GAMM2.700e-3853.544HBT domain-containing protein n=6 Tax=root TaxID=... [more]
A0A6B0YAV6_9GAMM3.380e-3855.83PaaI family thioesterase n=1 Tax=Gammaproteobacter... [more]
A0A6B1HJQ3_9GAMM4.370e-3855.00PaaI family thioesterase n=1 Tax=Gammaproteobacter... [more]
A0A523MFD5_9GAMM2.130e-3754.62PaaI family thioesterase n=1 Tax=Gammaproteobacter... [more]
A0A6L7XSW1_9GAMM3.450e-3755.00PaaI family thioesterase n=1 Tax=Gammaproteobacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14236contigP-wetherbeei_contig14236:574..996 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1333998.M2A_0722
PFAMs4HBT
Model size423
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.22e-30
EggNOG OGsCOG2050@1|root,COG2050@2|Bacteria
Descriptionthiolester hydrolase activity
Cds size423
COG categoryQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186014.422692-CDS-P-wetherbeei_contig14236:573..9961683186014.422692-CDS-P-wetherbeei_contig14236:573..996Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14236 574..996 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14236.2.1prot_P-wetherbeei_contig14236.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14236 574..996 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14236.2.1

>prot_P-wetherbeei_contig14236.2.1 ID=prot_P-wetherbeei_contig14236.2.1|Name=mRNA_P-wetherbeei_contig14236.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=141bp
MLAERCIERVRYIAAGQHFARHLSIEVVSIEVDRAVLRLPYREYLGIERV
NGGAIASLVDLAGTCACWSNPLVSEAARGATIGFTINYLKLVVASDLIAS
GQVRRRGGSLCVAEVSVCNEAGDEVAIATINYKLEPRGAP*
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mRNA from alignment at P-wetherbeei_contig14236:574..996+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14236.2.1 ID=mRNA_P-wetherbeei_contig14236.2.1|Name=mRNA_P-wetherbeei_contig14236.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig14236:574..996+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTTGCAGAGCGCTGCATAGAGCGGGTCAGATACATCGCCGCCGGACA GCACTTCGCCCGGCACTTGAGTATCGAGGTAGTGTCGATAGAGGTGGACC GCGCCGTGCTGCGGCTGCCTTATCGTGAGTATCTCGGCATCGAGCGGGTC AACGGCGGCGCGATCGCGTCGCTGGTCGACCTCGCCGGCACCTGCGCATG CTGGTCGAATCCGCTGGTGAGCGAGGCCGCGCGTGGTGCCACCATCGGCT TCACCATCAATTATCTCAAGCTGGTGGTTGCTTCCGACTTGATTGCCAGC GGTCAGGTGCGTCGGCGCGGCGGCAGTCTGTGTGTGGCGGAAGTCAGTGT ATGCAACGAGGCCGGTGACGAAGTCGCTATTGCTACCATCAATTACAAGC TCGAGCCGCGCGGCGCGCCGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14236:574..996+

>mRNA_P-wetherbeei_contig14236.2.1 ID=mRNA_P-wetherbeei_contig14236.2.1|Name=mRNA_P-wetherbeei_contig14236.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig14236:574..996+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTTGCAGAGCGCTGCATAGAGCGGGTCAGATACATCGCCGCCGGACA
GCACTTCGCCCGGCACTTGAGTATCGAGGTAGTGTCGATAGAGGTGGACC
GCGCCGTGCTGCGGCTGCCTTATCGTGAGTATCTCGGCATCGAGCGGGTC
AACGGCGGCGCGATCGCGTCGCTGGTCGACCTCGCCGGCACCTGCGCATG
CTGGTCGAATCCGCTGGTGAGCGAGGCCGCGCGTGGTGCCACCATCGGCT
TCACCATCAATTATCTCAAGCTGGTGGTTGCTTCCGACTTGATTGCCAGC
GGTCAGGTGCGTCGGCGCGGCGGCAGTCTGTGTGTGGCGGAAGTCAGTGT
ATGCAACGAGGCCGGTGACGAAGTCGCTATTGCTACCATCAATTACAAGC
TCGAGCCGCGCGGCGCGCCGTGA
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