mRNA_P-wetherbeei_contig14232.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14232.1.1
Unique NamemRNA_P-wetherbeei_contig14232.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14232.1.1 vs. uniprot
Match: D8LHY7_ECTSI (Heat shock protein 90 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHY7_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 2.070e-103
Identity = 177/225 (78.67%), Postives = 199/225 (88.44%), Query Frame = 1
Query:    1 AVALIASNP-GISRSRAMVNAQDAV---STMDPAFEEQLKANGEAFEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLALSKDNALGDKKDLDIRITADKEARTLTIRDSGIGMTRAELIANLGTVAKSGTTNFVEALSETGDLSLIGQFGVGFYSVYLVADKVQVFSKHNDDEQHVWESTADSTFTVAKDPRGDTLGRGTEIVLHLKEDAGAFL 663
            A AL +S P G S S  +  A++AV   STMD AFEEQLK   EAFEFQAEVNRLMDIIINSLYKNK+IFLRELISNASDALDKIRFL++S  + LG  KDL+IRI+ADK+ARTLTIRD+G+GMT+A+LI+NLGTVA+SGTTNFVEAL+ETGDL LIGQFGVGFYSVYLVADKVQV SK NDD+Q+VWESTADSTFTV+KDPRG+TLGRGTEIVLHLKEDAG FL
Sbjct:   12 AAALQSSTPWGGSASSGLARAEEAVAPASTMDAAFEEQLKDGAEAFEFQAEVNRLMDIIINSLYKNKDIFLRELISNASDALDKIRFLSVSDPDKLGTAKDLEIRISADKDARTLTIRDAGVGMTKADLISNLGTVARSGTTNFVEALTETGDLGLIGQFGVGFYSVYLVADKVQVISKSNDDDQYVWESTADSTFTVSKDPRGNTLGRGTEIVLHLKEDAGEFL 236          
BLAST of mRNA_P-wetherbeei_contig14232.1.1 vs. uniprot
Match: A0A835YKX1_9STRA (Hsp90 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX1_9STRA)

HSP 1 Score: 291 bits (745), Expect = 5.050e-89
Identity = 166/253 (65.61%), Postives = 191/253 (75.49%), Query Frame = 1
Query:   28 GISRSRAMVNAQDAVSTMDPAFEEQLKANGEAFEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLALSKDNALGDKKD-LDIRITADKEARTLTIRDSGIGMTRAELIANLGTVAKSGTTNFVEALSETGDLSLIGQFGVGFYSVYLVADKVQVFSKHNDDEQHVWESTADSTFTVAKDPRGDTLGRGTEIVLHLKEDAGAFLFGSIRRLIGFFRLLSKEC*NGLL*MRFTTSFTFPSVEQEK 783
            G+ +S ++V A + VS  +PA         E+FEFQAEVNRLMDIIINSLYK KEIFLRE+ISNASDALDK+RF+A+S   AL +  D L IRI+ADKEART+TI D+G+GMTR ELIANLGTVAKSGTTNFVEAL ETGDLSLIGQFGVGFYSVYLVADKVQV SKH  D+Q++WESTADSTFTV +DPRGDTLGRGTEIVLHLKEDA  FL               +E     L  R++   TFP  +Q +
Sbjct:   25 GVQKSTSLVAAAE-VSATEPA------VAAESFEFQAEVNRLMDIIINSLYKTKEIFLREVISNASDALDKLRFMAVSDKTALAEGDDELRIRISADKEARTITIADTGVGMTRQELIANLGTVAKSGTTNFVEALGETGDLSLIGQFGVGFYSVYLVADKVQVVSKHAGDKQYIWESTADSTFTVREDPRGDTLGRGTEIVLHLKEDADEFL---------------EETRLADLIHRYSEFITFPIYQQRE 255          
BLAST of mRNA_P-wetherbeei_contig14232.1.1 vs. uniprot
Match: A0A7S2FDD0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDD0_9STRA)

HSP 1 Score: 291 bits (746), Expect = 5.980e-89
Identity = 157/211 (74.41%), Postives = 180/211 (85.31%), Query Frame = 1
Query:   40 SRAMVNAQDA-VSTMDPAFEEQLKANGEAFEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLALSKDNALGDKKDLDIRITADKEARTLTIRDSGIGMTRAELIANLGTVAKSGTTNFVEALSETG--DLSLIGQFGVGFYSVYLVADKVQVFSKHNDDEQHVWESTADSTFTVAKDPRGDTLGRGTEIVLHLKEDAGAFL 663
            S  +  AQDA  + M    E  +   GE+FEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLA+S ++ALGD KDL+I+I  DK+ARTLTI D+G+GMT+A+L+ANLGTVAKSGTTNFVEALS  G  DLSLIGQFGVGFYSVYLVADKV+V SK+NDD+Q++WESTADS F +AKDPRG++LGRGTEI L LKEDAG FL
Sbjct:   41 SSGLAAAQDAPAAQMTEEQEAAIAEGGESFEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLAVSDESALGDTKDLEIKIKFDKDARTLTIIDTGVGMTKADLVANLGTVAKSGTTNFVEALSGDGGGDLSLIGQFGVGFYSVYLVADKVRVASKNNDDDQYIWESTADSNFVIAKDPRGNSLGRGTEITLFLKEDAGEFL 251          
BLAST of mRNA_P-wetherbeei_contig14232.1.1 vs. uniprot
Match: F0Y644_AURAN (HATPase_c domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y644_AURAN)

HSP 1 Score: 284 bits (727), Expect = 1.100e-86
Identity = 151/194 (77.84%), Postives = 170/194 (87.63%), Query Frame = 1
Query:   88 AFEEQLKANGEAFEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLALSKDNALGDKKDLDIRITADKEARTLTIRDSGIGMTRAELIANLGTVAKSGTTNFVEALS--ETGDLSLIGQFGVGFYSVYLVADKVQVFSKHNDDEQHVWESTADSTFTVAKDPRGDTLGRGTEIVLHLKEDAGAFL 663
            A+ E   A  E FEFQAEVNRLMDIIINSLYKNKEIFLRE+ISN SDALDKIRFLA+S   AL  KK+L+IRI+ DK+ARTLTI+DSG+GMT+A+L+ANLGTVAKSGTTNFVEA+S   +GDLSLIGQFGVGFYSVYLVAD+V+V SKHNDD+QHVWES ADS+FTV +DP GDTLGRGTEI L LKEDAG FL
Sbjct:   23 AYAEDAGAAPETFEFQAEVNRLMDIIINSLYKNKEIFLREVISNGSDALDKIRFLAVSDAAALDTKKELEIRISFDKDARTLTIQDSGVGMTKADLVANLGTVAKSGTTNFVEAMSGDASGDLSLIGQFGVGFYSVYLVADRVRVRSKHNDDDQHVWESAADSSFTVWQDPLGDTLGRGTEIKLFLKEDAGEFL 216          
BLAST of mRNA_P-wetherbeei_contig14232.1.1 vs. uniprot
Match: A0A7S1C8P7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8P7_9STRA)

HSP 1 Score: 275 bits (703), Expect = 1.260e-85
Identity = 143/188 (76.06%), Postives = 164/188 (87.23%), Query Frame = 1
Query:  103 LKANGEAFEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLALSKDNALGDKK--DLDIRITADKEARTLTIRDSGIGMTRAELIANLGTVAKSGTTNFVEALSETGDLSLIGQFGVGFYSVYLVADKVQVFSKHNDDEQHVWESTADSTFTVAKDPRGDTLGRGTEIVLHLKEDAGAF 660
            L+++ + FEFQAEV+RLMDIIINSLY  KEIFLRE+ISNASDALDKIRFLALS +NALG+ +  +L++RI+ DKE +TLTIRD GIGMT+ +LI NLGTVAKSGT+ FVEALS+  DLSLIGQFGVGFYS+YLVADKVQV SKHNDD QHVW STAD +F VA+DPRGDTLGRGTEI L LKEDAG F
Sbjct:   77 LESSEDKFEFQAEVSRLMDIIINSLYTKKEIFLREIISNASDALDKIRFLALSDENALGEGETAELEVRISFDKEEKTLTIRDRGIGMTKQDLITNLGTVAKSGTSQFVEALSQGADLSLIGQFGVGFYSIYLVADKVQVVSKHNDDAQHVWTSTADGSFAVAEDPRGDTLGRGTEITLFLKEDAGEF 264          
BLAST of mRNA_P-wetherbeei_contig14232.1.1 vs. uniprot
Match: A0A7S2RKZ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKZ1_9STRA)

HSP 1 Score: 281 bits (720), Expect = 2.070e-85
Identity = 149/193 (77.20%), Postives = 172/193 (89.12%), Query Frame = 1
Query:   94 EEQLKANGEAFEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLALSKDNALGDKKDLDIRITADKEARTLTIRDSGIGMTRAELIANLGTVAKSGTTNFVEALSETG---DLSLIGQFGVGFYSVYLVADKVQVFSKHNDDEQHVWESTADSTFTVAKDPRGDTLGRGTEIVLHLKEDAGAFL 663
            E+ L  + E+FEFQAEVNRLMDIIINSLYK+K+IFLRELISNASDALDKIRFL++S + AL  KK+L+I+I  DK+ARTLTI DSG+GMT+A+LI NLGTVAKSGTTNFVEAL+  G   DLSLIGQFGVGFYSVYLVADKV+V SKHNDDEQ+VWESTADSTF++A+DPRG+TLGRGTEI L LK+DAG FL
Sbjct:   54 EQALAESVESFEFQAEVNRLMDIIINSLYKSKDIFLRELISNASDALDKIRFLSVSDEAALDAKKELEIKIRFDKDARTLTITDSGVGMTKADLINNLGTVAKSGTTNFVEALAGGGEGVDLSLIGQFGVGFYSVYLVADKVRVASKHNDDEQYVWESTADSTFSIAQDPRGNTLGRGTEITLFLKDDAGEFL 246          
BLAST of mRNA_P-wetherbeei_contig14232.1.1 vs. uniprot
Match: A0A7S3K2Q3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2Q3_9STRA)

HSP 1 Score: 272 bits (695), Expect = 4.120e-85
Identity = 140/185 (75.68%), Postives = 164/185 (88.65%), Query Frame = 1
Query:  118 EAFEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLALSKDNALGDKKDLDIRITADKEARTLTIRDSGIGMTRAELIANLGTVAKSGTTNFVEALSET---GDLSLIGQFGVGFYSVYLVADKVQVFSKHNDDEQHVWESTADSTFTVAKDPRGDTLGRGTEIVLHLKEDAGAFL 663
            E FEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDA+DKIR+L++S    L  KK+LDIRI  + + RTLTI D+G+GMT+A+L+ANLGTVAKSGTTNFVEA+S++   GDLSLIGQFGVGFYSVYLVADKV+V SKHN+D+Q++WES+ADS+F+V KDP G+TLGRGTEI L LKEDAG FL
Sbjct:   33 ETFEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDAIDKIRYLSVSDPTVLDSKKELDIRIQFNSDERTLTITDAGVGMTKADLVANLGTVAKSGTTNFVEAMSQSENSGDLSLIGQFGVGFYSVYLVADKVKVRSKHNNDDQYIWESSADSSFSVWKDPEGNTLGRGTEITLFLKEDAGEFL 217          
BLAST of mRNA_P-wetherbeei_contig14232.1.1 vs. uniprot
Match: A0A7S3XYP4_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYP4_HETAK)

HSP 1 Score: 280 bits (717), Expect = 4.910e-85
Identity = 147/190 (77.37%), Postives = 172/190 (90.53%), Query Frame = 1
Query:  103 LKANGEAFEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLALSKDNALGD--KKDLDIRITADKEARTLTIRDSGIGMTRAELIANLGTVAKSGTTNFVEALSETG-DLSLIGQFGVGFYSVYLVADKVQVFSKHNDDEQHVWESTADSTFTVAKDPRGDTLGRGTEIVLHLKEDAGAFL 663
            L+ + E+FEFQAEV+RLMDIIINSLY+ KEIFLRELISNASDALDKIRFLA+S +  LG+  +K+L I+I+ DKEA+TLTIRD+GIGMT+A+L+ANLGTVAKSGTTNFVEA+S  G DLS+IGQFGVGFYSVYLVADKVQV SKHNDD+Q++WESTADS F VA+DPRG+TLGRGTEI L LKEDAG+FL
Sbjct:   51 LETSKESFEFQAEVSRLMDIIINSLYQKKEIFLRELISNASDALDKIRFLAVSDEKVLGEGAEKELSIKISYDKEAQTLTIRDTGIGMTKADLVANLGTVAKSGTTNFVEAMSGGGGDLSMIGQFGVGFYSVYLVADKVQVVSKHNDDDQYLWESTADSNFAVARDPRGNTLGRGTEITLFLKEDAGSFL 240          
BLAST of mRNA_P-wetherbeei_contig14232.1.1 vs. uniprot
Match: A0A7R9U2P1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2P1_9STRA)

HSP 1 Score: 280 bits (715), Expect = 7.990e-85
Identity = 150/215 (69.77%), Postives = 173/215 (80.47%), Query Frame = 1
Query:   31 ISRSRAMVNAQDAVSTMDPAFEEQLKA-----NGEAFEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLALSKDNALGDKKDLDIRITADKEARTLTIRDSGIGMTRAELIANLGTVAKSGTTNFVEALSETGDLSLIGQFGVGFYSVYLVADKVQVFSKHNDDEQHVWESTADSTFTVAKDPRGDTLGRGTEIVLHLKEDAGAF 660
            +SRS A     D    ++ A EE ++        E FEFQAEVNRLMDIIINSLYKNKEIFLRE+ISNASDALDKIRFLA+S +NAL   ++L I I+AD+EA+TLTIRD+G+GMT+A+LIANLGTVAKSGTTNF EALS  GD+SLIGQFGVGFYSVYLVAD+V+V SKHNDD+QH+WESTADS F V  DP G +LGRGTEI L LKEDA  F
Sbjct:   17 LSRSMAQEADTDVAEEVESAAEESVETLASLEGSETFEFQAEVNRLMDIIINSLYKNKEIFLREVISNASDALDKIRFLAVSDENALAAGEELKIEISADREAKTLTIRDTGVGMTKADLIANLGTVAKSGTTNFAEALSGEGDISLIGQFGVGFYSVYLVADRVRVRSKHNDDDQHIWESTADSNFYVVADPEGSSLGRGTEITLFLKEDALEF 231          
BLAST of mRNA_P-wetherbeei_contig14232.1.1 vs. uniprot
Match: K3WJT2_GLOUD (HATPase_c domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJT2_GLOUD)

HSP 1 Score: 279 bits (714), Expect = 2.090e-84
Identity = 142/188 (75.53%), Postives = 165/188 (87.77%), Query Frame = 1
Query:   97 EQLKANGEAFEFQAEVNRLMDIIINSLYKNKEIFLRELISNASDALDKIRFLALSKDNALGDKKDLDIRITADKEARTLTIRDSGIGMTRAELIANLGTVAKSGTTNFVEALSETGDLSLIGQFGVGFYSVYLVADKVQVFSKHNDDEQHVWESTADSTFTVAKDPRGDTLGRGTEIVLHLKEDAGAF 660
            E ++A GE FEFQAEV+RLMDI+INSLYK KEIFLRELISNASDALDKIRFLALS D  LG  KDLDIRI+ DK+A TLTIRDSG+GMT+ +L+ANLGTVAKSGT NFVE +  +GD SLIGQFGVGFYSVYLVAD+V+V SK+NDD+Q++WES A+++FTVAKDPRG+TLGRGTEI L LK+DA  F
Sbjct:   54 ETVQATGEQFEFQAEVSRLMDILINSLYKTKEIFLRELISNASDALDKIRFLALSNDKLLGKVKDLDIRISFDKDANTLTIRDSGVGMTKKDLVANLGTVAKSGTANFVEKMQRSGDASLIGQFGVGFYSVYLVADRVRVVSKNNDDDQYIWESDANASFTVAKDPRGNTLGRGTEITLFLKDDAKEF 241          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14232.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHY7_ECTSI2.070e-10378.67Heat shock protein 90 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835YKX1_9STRA5.050e-8965.61Hsp90 protein-domain-containing protein n=1 Tax=Tr... [more]
A0A7S2FDD0_9STRA5.980e-8974.41Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
F0Y644_AURAN1.100e-8677.84HATPase_c domain-containing protein n=1 Tax=Aureoc... [more]
A0A7S1C8P7_9STRA1.260e-8576.06Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2RKZ1_9STRA2.070e-8577.20Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3K2Q3_9STRA4.120e-8575.68Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A7S3XYP4_HETAK4.910e-8577.37Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A7R9U2P1_9STRA7.990e-8569.77Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
K3WJT2_GLOUD2.090e-8475.53HATPase_c domain-containing protein n=1 Tax=Globis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14232contigP-wetherbeei_contig14232:21..1204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009035651.1
Preferred nameHSP90B
PFAMsHATPase_c,HATPase_c_3,HSP90
Model size909
Max annot lvl2759|Eukaryota
KEGG koko:K04079,ko:K09487
KEGG Pathwayko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko04918,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map04918,map05200,map05215,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0002790,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005783,GO:0005788,GO:0005886,GO:0005911,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006950,GO:0006970,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009306,GO:0009409,GO:0009414,GO:0009415,GO:0009506,GO:0009507,GO:0009536,GO:0009628,GO:0009651,GO:0009888,GO:0009934,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010073,GO:0010075,GO:0010243,GO:0010498,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0019941,GO:0022603,GO:0030054,GO:0030163,GO:0030433,GO:0031090,GO:0031974,GO:0032501,GO:0032502,GO:0032940,GO:0033036,GO:0033554,GO:0034976,GO:0036503,GO:0040008,GO:0042221,GO:0042886,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046686,GO:0046903,GO:0048046,GO:0048507,GO:0048509,GO:0048638,GO:0048856,GO:0050789,GO:0050793,GO:0050896,GO:0051179,GO:0051234,GO:0051603,GO:0051716,GO:0055044,GO:0065007,GO:0070013,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0098588,GO:0098805,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901700
Exons3
Evalue9.55e-89
EggNOG OGsCOG0326@1|root,KOG0020@2759|Eukaryota
Ec32 ortholog descriptionHeat shock protein 90
Ec32 orthologEc-18_001040.1
Descriptionunfolded protein binding
Cds size672
COG categoryO
BRITEko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186014.2566004-UTR-P-wetherbeei_contig14232:20..2091683186014.2566004-UTR-P-wetherbeei_contig14232:20..209Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14232 21..209 -
1683186014.3021505-UTR-P-wetherbeei_contig14232:1156..12041683186014.3021505-UTR-P-wetherbeei_contig14232:1156..1204Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14232 1157..1204 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186014.2704635-CDS-P-wetherbeei_contig14232:209..6271683186014.2704635-CDS-P-wetherbeei_contig14232:209..627Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14232 210..627 -
1683186014.281824-CDS-P-wetherbeei_contig14232:788..9491683186014.281824-CDS-P-wetherbeei_contig14232:788..949Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14232 789..949 -
1683186014.2926543-CDS-P-wetherbeei_contig14232:1063..11561683186014.2926543-CDS-P-wetherbeei_contig14232:1063..1156Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14232 1064..1156 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14232.1.1prot_P-wetherbeei_contig14232.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14232 210..1156 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14232.1.1

>prot_P-wetherbeei_contig14232.1.1 ID=prot_P-wetherbeei_contig14232.1.1|Name=mRNA_P-wetherbeei_contig14232.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp
MVNAQDAVSTMDPAFEEQLKANGEAFEFQAEVNRLMDIIINSLYKNKEIF
LRELISNASDALDKIRFLALSKDNALGDKKDLDIRITADKEARTLTIRDS
GIGMTRAELIANLGTVAKSGTTNFVEALSETGDLSLIGQFGVGFYSVYLV
ADKVQVFSKHNDDEQHVWESTADSTFTVAKDPRGDTLGRGTEIVLHLKED
AGAFLFGSIRRLIGFFRLLSKEC*
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mRNA from alignment at P-wetherbeei_contig14232:21..1204-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14232.1.1 ID=mRNA_P-wetherbeei_contig14232.1.1|Name=mRNA_P-wetherbeei_contig14232.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1184bp|location=Sequence derived from alignment at P-wetherbeei_contig14232:21..1204- (Phaeothamnion wetherbeei SAG_119_79)
GCAGTGGCCCTGATCGCGTCGAACCCCGGGATCTCGCGCTCCCGGGCGAT GGTCAACGCGCAGGACGCCGTCTCAACGATGGACCCTGCTTTCGAGGAGC AGCTCAAGGCGAACGGCGAGGCCTTCGAGTTCCAGGCGGAGGTAAGCGAC CTAGGCCGTGTTTGTGCGCCGAAATTTTGCGTGCTTCGAGTTTGCAACGC GTTTTTCACGTCGGCGCCTCTACCGTTTTTCTTTCAACCTTCGTTTTCTT TGCAGGTCAACCGGTTGATGGACATTATCATTAATTCCCTGTACAAGAAC AAGGAGATCTTCCTTCGCGAGCTCATTTCCAACGCCAGCGACGCCCTCGA CAAGATCCGCTTCCTTGCCCTGAGCAAGGATAACGCGCTCGGAGACAAGA AGGATCTTGACATTCGGTGAGTTCTGTAGTTGTTCATAATTCCAGCTTTC CCATTGAGCCACACATTCGTGAATCTGTCTCTTGCTCCTCAAACTCCTCT TGACATAAGTTCTCAACCCCGTGTTGCTACCAACACCACAAATTCTGCCG GATTACTTGGCCTTTTGCGCCGCGCAGCATCACGGCGGACAAAGAGGCGC GGACGCTAACGATCCGGGACAGCGGCATCGGCATGACCCGTGCAGAGCTG ATTGCCAACCTGGGAACGGTCGCCAAGTCGGGCACCACCAACTTTGTCGA GGCGCTGAGCGAGACGGGCGACCTGTCGCTAATCGGGCAGTTTGGCGTGG GCTTCTACTCGGTGTACCTGGTGGCCGACAAGGTGCAGGTCTTCTCCAAG CACAACGACGATGAGCAGCACGTCTGGGAGTCGACGGCTGACTCGACCTT CACCGTCGCCAAGGACCCGCGCGGCGACACCCTCGGCCGCGGCACGGAGA TCGTGCTCCACCTCAAAGAGGACGCCGGTGCGTTTCTCTTTGGCAGCATT AGGCGTTTGATTGGTTTCTTTAGACTTTTGTCTAAAGAATGTTGAAATGG ATTATTGTAGATGAGGTTTACAACAAGTTTCACCTTCCCCAGCGTTGAGC AAGAAAAATGCCCGGCAAGGTTTCTTTTTTGAAAAGCCAATACCGGTATG TTTTTTTCTTTTTGGGGCCGTCAGGAAAATTGTTGACCTGGAGTATACTC TTTTGCTCACCATTCCTCGCCATTTCTTAACGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14232:21..1204-

>mRNA_P-wetherbeei_contig14232.1.1 ID=mRNA_P-wetherbeei_contig14232.1.1|Name=mRNA_P-wetherbeei_contig14232.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig14232:21..1204- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCAACGCGCAGGACGCCGTCTCAACGATGGACCCTGCTTTCGAGGA
GCAGCTCAAGGCGAACGGCGAGGCCTTCGAGTTCCAGGCGGAGGTCAACC
GGTTGATGGACATTATCATTAATTCCCTGTACAAGAACAAGGAGATCTTC
CTTCGCGAGCTCATTTCCAACGCCAGCGACGCCCTCGACAAGATCCGCTT
CCTTGCCCTGAGCAAGGATAACGCGCTCGGAGACAAGAAGGATCTTGACA
TTCGCATCACGGCGGACAAAGAGGCGCGGACGCTAACGATCCGGGACAGC
GGCATCGGCATGACCCGTGCAGAGCTGATTGCCAACCTGGGAACGGTCGC
CAAGTCGGGCACCACCAACTTTGTCGAGGCGCTGAGCGAGACGGGCGACC
TGTCGCTAATCGGGCAGTTTGGCGTGGGCTTCTACTCGGTGTACCTGGTG
GCCGACAAGGTGCAGGTCTTCTCCAAGCACAACGACGATGAGCAGCACGT
CTGGGAGTCGACGGCTGACTCGACCTTCACCGTCGCCAAGGACCCGCGCG
GCGACACCCTCGGCCGCGGCACGGAGATCGTGCTCCACCTCAAAGAGGAC
GCCGGTGCGTTTCTCTTTGGCAGCATTAGGCGTTTGATTGGTTTCTTTAG
ACTTTTGTCTAAAGAATGTTGA
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