prot_P-wetherbeei_contig14221.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14221.1.1
Unique Nameprot_P-wetherbeei_contig14221.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length190
Homology
BLAST of mRNA_P-wetherbeei_contig14221.1.1 vs. uniprot
Match: A0A835ZEC1_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC1_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.230e-29
Identity = 70/142 (49.30%), Postives = 82/142 (57.75%), Query Frame = 0
Query:    3 GVAIVHHTDEKEPAPLPLHHVPLCITFALFEDARPARSGGSSGSGGGALAAGAGVARHYAMDPTDAEEDSMSGRVTFALNAHGELCTLHKNGGAAMPVDAMLRCARLAADKVRMLHAILSAQLAAADAKAADERQRRLRGTA 144
            G   VHH+DE+E  PL LHHVPLCITFALF+D    R                       +DP + EE  M GRVT ALNAH E+CTLHKNGG AM  + +L CA +AA KV  LH  L  +L  ADA A   R++RLRG A
Sbjct:  177 GFVEVHHSDEREAQPLALHHVPLCITFALFDDMGKQR---------------------VVVDPDEVEEAVMKGRVTIALNAHREVCTLHKNGGMAMSAETLLACADVAAAKVVALHERLREELQKADAAARQAREQRLRGGA 297          
BLAST of mRNA_P-wetherbeei_contig14221.1.1 vs. uniprot
Match: A0A813C5A5_9DINO (RRP45B protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C5A5_9DINO)

HSP 1 Score: 101 bits (252), Expect = 1.470e-22
Identity = 63/154 (40.91%), Postives = 89/154 (57.79%), Query Frame = 0
Query:    2 GGVAIVHHTDEKEPAPLPLHHVPLCITFALF-------EDARPARSGGSSGSGGGALAAGAGVARHYAMDPTDAEEDSMSGRVTFALNAHGELCTLHKNGGAAMPVDAMLRCARLAADKVRMLHAILSAQLAAADAKAADERQRRLRGTALRAG 148
            G    VH  DEK P PL +HH P+C+TF LF       +D   A +     +   +  AG G  +  A+DP++AEED +  R+TFA+NAHGELC +HK GGA +  D +LR A++A+ +   L A L + LA ADA    E++R ++  A  AG
Sbjct:  140 GTQVTVHEYDEKPPVPLSIHHSPVCLTFGLFSVPDASDDDGDVASAPAMPRAASASALAGEGTRQVLALDPSEAEEDVLEDRLTFAVNAHGELCMVHKVGGAPLDQDDILRYAKVASARGVTLLAHLQSVLAQADAV---EKKRAMKAHAAAAG 290          
BLAST of mRNA_P-wetherbeei_contig14221.1.1 vs. uniprot
Match: I2CP19_NANGC (Exosome complex component RRP45 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CP19_NANGC)

HSP 1 Score: 102 bits (255), Expect = 4.890e-22
Identity = 57/139 (41.01%), Postives = 81/139 (58.27%), Query Frame = 0
Query:    6 IVHHTDEKEPAPLPLHHVPLCITFALFEDARPARSGGSSGSGGGALAAGAGVARHYAMDPTDAEEDSMSGRVTFALNAHGELCTLHKNGGAAMPVDAMLRCARLAADKVRMLHAILSAQLAAADAKAADERQRRLRGTA 144
            +VHH+ EKEP+ LP+HHVP+C+TF LF  + P  S                      +DPT+ EE  M GR+TF++N H E+C + K GG A+   ++ R A +A +KV   H++L   L AAD++A  ER R +RGTA
Sbjct:  209 VVHHSFEKEPSALPIHHVPICVTFVLFNTS-PIVS---------------------VIDPTEREELVMGGRITFSINVHREVCAMQKIGGLALAPTSLARLAEIAMEKVGDWHSLLQTSLEAADSQAKAERLRCVRGTA 325          
BLAST of mRNA_P-wetherbeei_contig14221.1.1 vs. uniprot
Match: A0A7S2W9X9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9X9_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 4.290e-20
Identity = 60/158 (37.97%), Postives = 80/158 (50.63%), Query Frame = 0
Query:    7 VHHTDEKEPAPLPLHHVPLCITFALFEDARPARSGGSSGSGGGALAAGAGVARHYAMDPTDAEEDSMSGRVTFALNAHGELCTLHKNGGAAMPVDAMLRCARLAADKVRMLHAILSAQLAAADAKAADERQRRLRGTALRAGGAPPTTPLVAGTAAMP 164
            VHH+DEK+  PLPLHHVPLC+TF  F+  R                           D T AEE   +GR++ +LN H +LC L K GG ++    +L   + AA +V+ +H  L AQL +AD KA  ERQ R+RG    A  + P    +  TA  P
Sbjct:  230 VHHSDEKDALPLPLHHVPLCVTFGFFQGPRS-------------------NVPEVVADMTRAEEAVAAGRLSVSLNTHKDLCALRKGGGCSVSPSMLLMLTQTAALRVQEVHGWLVAQLKSADEKANKERQLRIRGRDYEAARSVPDPKAMLNTAVHP 368          
BLAST of mRNA_P-wetherbeei_contig14221.1.1 vs. uniprot
Match: A0A139A784_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A784_GONPJ)

HSP 1 Score: 94.7 bits (234), Expect = 8.260e-20
Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 0
Query:    7 VHHTDEKEPAPLPLHHVPLCITFALFEDARPARSGGSSGSGGGALAAGAGVARHYAMDPTDAEEDSMSGRVTFALNAHGELCTLHKNGGAAMPVDAMLRCARLAADKVRMLHAILSAQL 125
            VH  DE+ P PL +HHVP+C+TFA+ ++              G L           +DPT  EED   G VTF++NAH E+C + K+GGAA+P+DA+LRCA++A  +   +H  L   L
Sbjct:  174 VHSLDERNPVPLSVHHVPICVTFAILDE--------------GQL---------MVLDPTSLEEDCRCGDVTFSMNAHREVCAVAKSGGAALPIDALLRCAKVATWRSLEIHEALQKSL 269          
BLAST of mRNA_P-wetherbeei_contig14221.1.1 vs. uniprot
Match: A0A7S4K489_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K489_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.810e-19
Identity = 59/148 (39.86%), Postives = 72/148 (48.65%), Query Frame = 0
Query:    7 VHHTDEKEPAPLPLHHVPLCITFALFEDARPARSGGSSGSGGGALAAGAGVARHYAMDPTDAEEDSMSGRVTFALNAHGELCTLHKNGGAAMPVDAMLRCARLAADKVRMLHAILSAQLAAADAKAADERQRRLRGTALRAGGAPPTT 154
            + H+DE+EP+PLPLHH PLC+TFAL           S G+  GA A          +DP D EE    G  T   N HGELC +   GG  +P   ++  A+    K   L  +L   L  AD KA  ER  RLR  A  AG  P TT
Sbjct:   30 IWHSDEREPSPLPLHHTPLCVTFALLAPESDDPGAASPGAEAGASAL---------VDPNDREELVADGTATACYNKHGELCGVDYPGGCELPPSQLVALAKTGRRKCVELCEVLERALGEADEKAGLERMGRLRAAAAEAGEIPGTT 168          
BLAST of mRNA_P-wetherbeei_contig14221.1.1 vs. uniprot
Match: A0A6H5KDM4_9PHAE (RNase_PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM4_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 5.960e-17
Identity = 51/113 (45.13%), Postives = 64/113 (56.64%), Query Frame = 0
Query:    1 DGGVAIVHHTDEKEPAPLPLHHVPLCITFALFEDA-----------------------RPA-RSGGSSGSGGGALAAG--AGVARHYAMDPTDAEEDSMSGRVTFALNAHGEL 87
            DG   +VHHTD+KEP PL LHHVP+C+TFA+FE                         RPA   GG+S S GG   AG  +   +H A DPT+AEE+ M GR+TFA+ AH E+
Sbjct:  170 DGSKVVVHHTDDKEPHPLALHHVPICVTFAIFEVTLRYCYSDFGPIMGGKDTGDPSIGRPAVGGGGASKSTGGMNGAGMSSSATQHIAADPTEAEEEVMKGRITFAMTAHKEV 282          
BLAST of mRNA_P-wetherbeei_contig14221.1.1 vs. uniprot
Match: A0A7S3Q5H4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5H4_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.110e-16
Identity = 53/136 (38.97%), Postives = 69/136 (50.74%), Query Frame = 0
Query:    6 IVHHTDEKEPAPLPLHHVPLCITFALFEDARPARSGGSSGSGGGALAAGAGVARHYAMDPTDAEEDSMSGRVTFALNAHGELCTLHKNGGAAMPVDAMLRCARLAADKVRMLHAILSAQLAAADAKAADERQRRLR 141
            +V H+DEKEP PLPLHH PL +TFAL+ D   A +  S+                  +DP+  EE  M G  TF+ N +GE+C+L   GG  +    ++ CA L   K   L  IL   L  AD KA  ER  RL+
Sbjct:  274 VVLHSDEKEPTPLPLHHTPLTVTFALYADPSGATTSVSA-----------------LIDPSHREELVMDGNTTFSFNKYGEMCSLDFPGGCELKPRQLVMCATLGKRKCVELCNILETSLEEADLKAVQERLDRLK 392          
BLAST of mRNA_P-wetherbeei_contig14221.1.1 vs. uniprot
Match: A0A4P9XWY0_9FUNG (Ribosomal protein S5 domain 2-type protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XWY0_9FUNG)

HSP 1 Score: 84.7 bits (208), Expect = 2.560e-16
Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 0
Query:    7 VHHTDEKEPAPLPLHHVPLCITFALFEDARPARSGGSSGSGGGALAAGAGVARHYAMDPTDAEEDSMSGRVTFALNAHGELCTLHKNGGAAMPVDAMLRCARLAADK 113
            +H  +E+ P PL LHH+P+CI+FA FED +PA                        MDP+  EE    G +T  +N H ELC L K GG+ +P D ++RC +LAA K
Sbjct:  175 IHTLEERNPVPLALHHIPICISFAFFEDGQPANHSCPCD--------------RLVMDPSRLEERLQDGDMTVTVNTHRELCALSKAGGSPLPPDQVMRCVQLAATK 267          
BLAST of mRNA_P-wetherbeei_contig14221.1.1 vs. uniprot
Match: UPI00148AC116 (exosome complex component RRP45 isoform X2 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AC116)

HSP 1 Score: 85.9 bits (211), Expect = 2.790e-16
Identity = 46/142 (32.39%), Postives = 71/142 (50.00%), Query Frame = 0
Query:    1 DGGVAIVHHTDEKEPAPLPLHHVPLCITFALFEDARPARSGGSSGSGGGALAAGAGVARHYAMDPTDAEEDSMSGRVTFALNAHGELCTLHKNGGAAMPVDAMLRCARLAADKVRMLHAILSAQLAAADAKAADERQRRLRG 142
            DG   IVH +DEK+P PL +HH+P+C+TF+ +E  +                       +  +DPTD EE  M G++   +N H E+CTL  +G   +  D +LRC+ +A  KV  +  ++   L        ++RQ RL G
Sbjct:  168 DGSEVIVHPSDEKDPIPLSVHHMPICVTFSFYEQGK-----------------------YLLVDPTDKEEKVMDGKMVIGMNKHREICTLQVSGEMLLMKDQVLRCSNIAVVKVTEITELIQRALE-------NDRQARLNG 279          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14221.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEC1_9STRA2.230e-2949.30Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A813C5A5_9DINO1.470e-2240.91RRP45B protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
I2CP19_NANGC4.890e-2241.01Exosome complex component RRP45 n=3 Tax=Monodopsid... [more]
A0A7S2W9X9_9STRA4.290e-2037.97Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A139A784_GONPJ8.260e-2040.34Uncharacterized protein n=1 Tax=Gonapodya prolifer... [more]
A0A7S4K489_9STRA1.810e-1939.86Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A6H5KDM4_9PHAE5.960e-1745.13RNase_PH domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S3Q5H4_9STRA2.110e-1638.97Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A4P9XWY0_9FUNG2.560e-1639.25Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
UPI00148AC1162.790e-1632.39exosome complex component RRP45 isoform X2 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 1..147
e-value: 7.0E-24
score: 86.5
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 22..112
e-value: 3.6E-8
score: 33.3
NoneNo IPR availablePANTHERPTHR11097:SF14EXOSOME COMPLEX COMPONENT RRP45coord: 2..143
NoneNo IPR availablePANTHERPTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINcoord: 2..143
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 18..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14221contigP-wetherbeei_contig14221:1..570 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14221.1.1mRNA_P-wetherbeei_contig14221.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14221 1..570 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14221.1.1 ID=prot_P-wetherbeei_contig14221.1.1|Name=mRNA_P-wetherbeei_contig14221.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=190bp
DGGVAIVHHTDEKEPAPLPLHHVPLCITFALFEDARPARSGGSSGSGGGA
LAAGAGVARHYAMDPTDAEEDSMSGRVTFALNAHGELCTLHKNGGAAMPV
DAMLRCARLAADKVRMLHAILSAQLAAADAKAADERQRRLRGTALRAGGA
PPTTPLVAGTAAMPVDAAGAAAGASACAAATATATMAALA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027408PNPase/RNase_PH_dom_sf
IPR015847ExoRNase_PH_dom2
IPR036345ExoRNase_PH_dom2_sf