mRNA_P-wetherbeei_contig1421.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1421.1.4 vs. uniprot
Match: A0A835Z0I4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I4_9STRA) HSP 1 Score: 228 bits (580), Expect = 6.090e-69 Identity = 127/251 (50.60%), Postives = 176/251 (70.12%), Query Frame = 1
Query: 271 ITRRSALLHSAAAVAVSTLSCWPGAAQATGLLDFPPKKLNNRYFLVRSAESVADANDLVQSHPIDKLAAANGLTDKGVRQVETAAAELEKMGV-IGGATCFIWADLSSRAQQTAHLLAERLDVGQERVVPEFSFLEPRGLGALDGQKLSAVLPTVHASDKREGAAWRPPPNDDGTPHESAADVFVRVRQLMSKLETQQYFGEDIIIVSPDSDCLSVLQAYALGEDI-ADHARHFVRAGEARPLRVSDKTKT 1017
ITRR L +AA +L+ +P A+A+ L+ PP +LNNRYFL+RS +S ADA +Q+HPI KL +NGLT+ G RQ E AA L +G I+ D+S+R +TA++L + +++G+ERVVPE++FLEPRG+G + ++A+LP ++ +D ++ WRPPPNDDGT ES DV VR RQLMSKLETQ + EDI++VSPDSD LS+LQA+ LGE+ A H++ F RAGE RPL +S+KT+T
Sbjct: 67 ITRREVLTGAAAVAVGVSLASYPEPAEAS-LVMSPPLRLNNRYFLMRSGQSFADAAGQIQTHPIYKLHMSNGLTELGRRQAEKAAESLSGLGAGQDNRGVIIYHDISARCLETANVLCDCMEIGRERVVPEYAFLEPRGMGLWESGNVTAILPALYRADAQD-PTWRPPPNDDGTLSESVLDVLVRGRQLMSKLETQ-FSAEDIVLVSPDSDNLSILQAFVLGEEFFAKHSKFFFRAGEMRPLLLSEKTQT 314
BLAST of mRNA_P-wetherbeei_contig1421.1.4 vs. uniprot
Match: A0A6H5JV72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV72_9PHAE) HSP 1 Score: 216 bits (550), Expect = 9.330e-66 Identity = 112/206 (54.37%), Postives = 146/206 (70.87%), Query Frame = 1
Query: 406 VRSAESVADANDLVQSHPIDKLAAANGLTDKGVRQVETAAAELEKMGVIGGATCFIWADLSSRAQQTAHLLAERLDVGQERVVPEFSFLEPRGLGALDGQKLSAVLPTVHASDKREGAA---WRPPPNDDGTPHESAADVFVRVRQLMSKLETQQYFGEDIIIVSPDSDCLSVLQAYALGEDIADHARHFVRAGEARPLRVSDKTK 1014
+RS + +D +VQSHPIDKL N LTD+GV + + AA L +GV A FIWAD+S TA +LA+ L + QERV+PE++FLEPRG+G DG++++ VLP + A WRPPPN DGTP+ES DVFVRVRQL+SKLETQ Y GED+IIV+PDSDCLSVLQ++ LGED+ H+++++R GE R LRVS T+
Sbjct: 1 MRSGQGGSDKEGVVQSHPIDKLHVDNRLTDQGVEETQRAAGVLRALGV---ADAFIWADISRVDMDTARILAQELGIRQERVIPEYAFLEPRGMGIFDGKEVATVLPEAEGKVYEKDAVSLTWRPPPNTDGTPNESVDDVFVRVRQLLSKLETQ-YQGEDVIIVAPDSDCLSVLQSFVLGEDMGKHSKYYLRPGEGRQLRVSLDTE 202
BLAST of mRNA_P-wetherbeei_contig1421.1.4 vs. uniprot
Match: I1HQ26_BRADI (Uncharacterized protein n=13 Tax=Pooideae TaxID=147368 RepID=I1HQ26_BRADI) HSP 1 Score: 198 bits (503), Expect = 5.860e-58 Identity = 115/241 (47.72%), Postives = 156/241 (64.73%), Query Frame = 1
Query: 271 ITRRSALLHSAAAVAVSTLSCWPGAAQATGLLDFPPKKLNNRYFLVRSAESVADANDLVQSHPIDKLAAANGLTDKGVRQVETAAAELEKMGVIGGATCFIWADLSSRAQQTAHLLAERLDVGQERVVPEFSFLEPRGLGALDGQKLSAVLPTVHASDKREGAAWRPPPNDDGTPHESAADVFVRVRQLMSKLETQQYFGEDIIIVSPDSDCLSVLQAYALGEDIADHARHFVRAGEARPL 993
+ RR LL SAA V L+ P AA A GL PP L NRYFLVR+ ESV + L++++P+ K + +GL+ G+RQ AA EL ++G C+IW ++ RA Q A ++A + + ++VPE+SFL+ RGLGA +G++L VLP V+ASD +PPP +DGTP+ES ADVFVRV QLMS LETQ Y G+ ++IVSPDSD LS+LQA +G D+ H F + GE RP+
Sbjct: 29 VRRRDLLLLSAAPV---PLALSPAAASARGLFRMPPPGLANRYFLVRAGESVYEGQGLLRTNPVAKTSVDSGLSPAGLRQAARAALELRRLGACED-DCWIWPSITQRAYQAAEIIAAANSINRSKIVPEYSFLDARGLGAYEGKRLE-VLPEVYASDNISSDI-KPPPTNDGTPNESVADVFVRVTQLMSILETQ-YSGDTVVIVSPDSDNLSILQAGLIGLDLRRHNSLFFQPGEVRPV 262
BLAST of mRNA_P-wetherbeei_contig1421.1.4 vs. uniprot
Match: K3XKJ8_SETIT (Uncharacterized protein n=12 Tax=Panicoideae TaxID=147369 RepID=K3XKJ8_SETIT) HSP 1 Score: 195 bits (496), Expect = 8.220e-57 Identity = 110/235 (46.81%), Postives = 152/235 (64.68%), Query Frame = 1
Query: 289 LLHSAAAVAVSTLSCWPGAAQATGLLDFPPKKLNNRYFLVRSAESVADANDLVQSHPIDKLAAANGLTDKGVRQVETAAAELEKMGVIGGATCFIWADLSSRAQQTAHLLAERLDVGQERVVPEFSFLEPRGLGALDGQKLSAVLPTVHASDKREGAAWRPPPNDDGTPHESAADVFVRVRQLMSKLETQQYFGEDIIIVSPDSDCLSVLQAYALGEDIADHARHFVRAGEARPL 993
LL +A ++ ++ + P A A GL PP L NRYFLVR+ ESV + L++++P+ K + NGL+ G+RQ AA EL+++G C+IW ++ RA Q A ++A + + R+VPE+SFL+ RGLGA +G+ L LP V+ASD +PPP DGTP+ES ADVFVRV QLMS LETQ Y GE ++IVSPDSD LS+LQA +G D+ H+ F + GE RP+
Sbjct: 40 LLPAALSLQLAPSAAAPAPAAARGLFRMPPAALANRYFLVRAGESVYEGQGLLRTNPVAKTSVDNGLSPVGLRQTARAALELQRLGACED-DCWIWPSITQRAYQAAEIIAAANGINRSRIVPEYSFLDARGLGAFEGKSLD-TLPEVYASDNIS-PDMKPPPISDGTPNESVADVFVRVTQLMSILETQ-YSGETVVIVSPDSDNLSILQAGLIGLDLLRHSSLFFKPGEVRPV 270
BLAST of mRNA_P-wetherbeei_contig1421.1.4 vs. uniprot
Match: I1NQD2_ORYGL (Uncharacterized protein n=12 Tax=Oryzeae TaxID=147380 RepID=I1NQD2_ORYGL) HSP 1 Score: 194 bits (492), Expect = 2.980e-56 Identity = 105/219 (47.95%), Postives = 145/219 (66.21%), Query Frame = 1
Query: 337 PGAAQATGLLDFPPKKLNNRYFLVRSAESVADANDLVQSHPIDKLAAANGLTDKGVRQVETAAAELEKMGVIGGATCFIWADLSSRAQQTAHLLAERLDVGQERVVPEFSFLEPRGLGALDGQKLSAVLPTVHASDKREGAAWRPPPNDDGTPHESAADVFVRVRQLMSKLETQQYFGEDIIIVSPDSDCLSVLQAYALGEDIADHARHFVRAGEARPL 993
P AA A GL PP +L NRYFLVR+ ESV + +V+++P+ K + +GL+ G+RQ AA EL+++G C+IW ++ RA Q A ++A ++ + +VPE+SFL+ RGLGA +G+ L LP V+ASD +PPP DGTP+ES ADVFVRV QLMS LETQ Y G+ ++IVSPDSD LS+LQA +G D+ H+ F + GE RP+
Sbjct: 53 PAAASARGLFRMPPPRLANRYFLVRAGESVYEGQGVVRTNPVSKTSVDSGLSPAGLRQAARAALELQRLGACED-DCWIWPSITQRAYQAAEIIAAANEINRSHIVPEYSFLDARGLGAFEGKSLE-TLPEVYASDSISPDI-KPPPISDGTPNESVADVFVRVTQLMSILETQ-YSGDTVVIVSPDSDNLSILQAGLIGLDLRRHSSLFFQPGEVRPV 267
BLAST of mRNA_P-wetherbeei_contig1421.1.4 vs. uniprot
Match: D7FMD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD0_ECTSI) HSP 1 Score: 192 bits (489), Expect = 5.740e-56 Identity = 107/204 (52.45%), Postives = 138/204 (67.65%), Query Frame = 1
Query: 223 TLSMASKGGYGESAWAITRRSALLHSAAAVAVSTLSCWPGAAQATGLLDFPPKKLNNRYFLVRSAESVADANDLVQSHPIDKLAAANGLTDKGVRQVETAAAELEKMGVIGGATCFIWADLSSRAQQTAHLLAERLDVGQERVVPEFSFLEPRGLGALDGQKLSAVLPTVHASDKREGAAWRPPPNDDGTPHESAADVFVRVRQ 834
T S+GG+ +A +AL SAAA+ + S P +A A G+LDFPP +LNNRYFL+RS + +D +VQSHPIDKL N LTD+GV + + AA L +GV FIWAD+SSRAQ TA +LA+ LD+ QERV+PE++FLEPRG+G DG++++ VLP V+ D WRPPPN DGTP+ES DVFVRVRQ
Sbjct: 78 TAVAVSRGGF----FASIATAALGTSAAALGLVLAS--PESASANGMLDFPPARLNNRYFLMRSGQGASDKEGVVQSHPIDKLHVDNRLTDQGVEETQRAAGVLRALGV---GDAFIWADISSRAQDTARILAQELDIRQERVIPEYAFLEPRGMGIFDGKEVATVLPEVYEKDAIS-LTWRPPPNTDGTPNESVDDVFVRVRQ 271
BLAST of mRNA_P-wetherbeei_contig1421.1.4 vs. uniprot
Match: A0A835YJD9_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YJD9_9CHLO) HSP 1 Score: 192 bits (489), Expect = 1.080e-55 Identity = 102/215 (47.44%), Postives = 143/215 (66.51%), Query Frame = 1
Query: 361 LLDFPPKKLNNRYFLVRSAESVADANDLVQSHPIDKLAAANGLTDKGVRQV-ETAAAELEKMGVIGGATCFIWADLSSRAQQTAHLLAERLDVGQERVVPEFSFLEPRGLGALDGQKLSAVLPTVHASDKREGAAWRPPPNDDGTPHESAADVFVRVRQLMSKLETQQYFGEDIIIVSPDSDCLSVLQAYALGEDIADHARHFVRAGEARPLRVS 1002
L+ FP LNNRYFLVR+ ES A++ ++P+ K + +GL++ G QV EL K+G +C++W ++ + QTA ++A L VG+ R+VPE+SFL+ RGLGAL+ +L L + D + + WRPP +DGTPHESA DV VR+RQ+MS ETQ Y G+D+II+SPDSDCLSVLQA LG D+ H R+ R+GE RPL+++
Sbjct: 38 LVRFPADVLNNRYFLVRAGESYAESFGEPLTNPVWKTSERHGLSEFGKEQVLRGIIPELSKLGSCEDGSCWLWPSITQNSYQTAEVVAYVLGVGRSRIVPEYSFLDARGLGALERVRLDTALEAIAEGDSLD-SNWRPPKGEDGTPHESAQDVLVRMRQMMSITETQ-YSGDDVIIISPDSDCLSVLQAAVLGVDLRQHRRYAFRSGEVRPLQLA 250
BLAST of mRNA_P-wetherbeei_contig1421.1.4 vs. uniprot
Match: A0A8J4LTH9_9CHLO (Uncharacterized protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LTH9_9CHLO) HSP 1 Score: 192 bits (489), Expect = 2.240e-55 Identity = 105/215 (48.84%), Postives = 143/215 (66.51%), Query Frame = 1
Query: 361 LLDFPPKKLNNRYFLVRSAESVADANDLVQSHPIDKLAAANGLTDKGVRQVETAAA-ELEKMGVIGGATCFIWADLSSRAQQTAHLLAERLDVGQERVVPEFSFLEPRGLGALDGQKLSAVLPTVHASDKREGAAWRPPPNDDGTPHESAADVFVRVRQLMSKLETQQYFGEDIIIVSPDSDCLSVLQAYALGEDIADHARHFVRAGEARPLRVS 1002
L+ FP +LNNRYFLVR+ ES ++ D ++P+ K + +GL++ G +QV ELE++G G C++W ++ A QTA ++A +L +G+ R+VPE+SFL+ RGLGAL+ +L V A D + A WRPP DGTPHES+ DV VR+RQ +S ETQ YFGED++ VSPDSDCLSVLQA LG D+ +H R R GE RPL +S
Sbjct: 92 LVRFPADQLNNRYFLVRAGESYNESVDEPLTNPVWKTSEKHGLSELGKQQVLLGLVPELERIGACGDG-CWLWPSITQNAYQTAEVVAFQLGIGRSRIVPEYSFLDARGLGALETLRLGEAQQAVAAGDLLD-ADWRPPKGTDGTPHESSQDVMVRMRQALSITETQ-YFGEDVLFVSPDSDCLSVLQAAVLGVDLREHRRFSFRPGEVRPLLLS 303
BLAST of mRNA_P-wetherbeei_contig1421.1.4 vs. uniprot
Match: A0A8J4BJ87_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BJ87_9CHLO) HSP 1 Score: 192 bits (487), Expect = 4.450e-55 Identity = 112/244 (45.90%), Postives = 152/244 (62.30%), Query Frame = 1
Query: 274 TRRSALLHSAAAVAVSTLSCWPGAAQATGLLDFPPKKLNNRYFLVRSAESVADANDLVQSHPIDKLAAANGLTDKGVRQVETAAA-ELEKMGVIGGATCFIWADLSSRAQQTAHLLAERLDVGQERVVPEFSFLEPRGLGALDGQKLSAVLPTVHASDKREGAAWRPPPNDDGTPHESAADVFVRVRQLMSKLETQQYFGEDIIIVSPDSDCLSVLQAYALGEDIADHARHFVRAGEARPLRVS 1002
+RR LL A A L+ + L+ FP +LNNRYFLVR+ ES ++ ++P+ K + +GL+D G +QV ELE++G G C++W ++ A QTA ++A +L +G+ R+VPE+SFL+ RGLGAL+ +L V A D + A WRPP DGTPHES+ DV VR+RQ +S ETQ YFGED++ VSPDSDCLSVLQA LG D+ +H R R GE RPL +S
Sbjct: 65 SRRLVLLEGALAAVAGLLT--GSQSSHAALVRFPADQLNNRYFLVRAGESYNESVGEPLTNPVWKTSEKHGLSDLGKQQVLLGLVPELERLGACGDG-CWLWPSITQNAYQTAEVVAYQLGIGRSRIVPEYSFLDARGLGALETLRLEEAHQAVAAGDLLD-ADWRPPKGTDGTPHESSQDVVVRMRQALSITETQ-YFGEDVLFVSPDSDCLSVLQAAVLGVDLRNHRRFAFRPGEVRPLLLS 303
BLAST of mRNA_P-wetherbeei_contig1421.1.4 vs. uniprot
Match: A0A383VRG4_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VRG4_TETOB) HSP 1 Score: 191 bits (484), Expect = 1.150e-54 Identity = 122/278 (43.88%), Postives = 163/278 (58.63%), Query Frame = 1
Query: 184 PFRLLGQQRSPIGTLSMASKGGYGESAWAITRRSALLHSAAA--VAVSTLSCWPGAAQATGLLDFPPKKLNNRYFLVRSAESVADANDLVQSHPIDKLAAANGLTDKG-VRQVETAAAELEKMGVIGGATCFIWADLSSRAQQTAHLLAERLDVGQERVVPEFSFLEPRGLGALDGQKLSAVLPTVHASDKREGAAWRPPPNDDGTPHESAADVFVRVRQLMSKLETQQYFGEDIIIVSPDSDCLSVLQAYALGEDIADHARHFVRAGEARPLRVSDK 1008
P R L ++ PIG S S E + R LLH AA V V P A A GL FP +L NRY LVR+ ES ++ D + ++P+ K + GL+ +G V+ V +E +GV G A C+IW ++ QTA ++A L VG+ R+VPE+SFL+ RG+GALDG +++ V D + A WRPP DGTP+ESAADV R+RQL+S ETQ Y GED++IV+PDSD LS+LQA LG D+ H + R GE R L +SDK
Sbjct: 37 PCRGLQEKGWPIGEASAKS-----EFEGTLLARRQLLHCIAASLVLVQQQLAQPPPA-AAGLAQFPASELKNRYILVRAGESESETQDEMLTNPVWKQSGMAGLSSRGKVQVVRQTLPAMETLGVCGEAGCWIWPSITLNTYQTAEIMAGSLGVGRSRIVPEYSFLDARGVGALDGLRVATAAQQVLEGDLLD-ANWRPPKGYDGTPNESAADVLTRMRQLLSICETQ-YSGEDVVIVAPDSDTLSILQAAVLGVDLRQHRQLGFRPGEVRVLLLSDK 306 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1421.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1421.1.4 >prot_P-wetherbeei_contig1421.1.4 ID=prot_P-wetherbeei_contig1421.1.4|Name=mRNA_P-wetherbeei_contig1421.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=342bp SVDLHFPLTIAYPRKTTFSSESSDAVKGKQKFDITTAHKTSMIARTIALAback to top mRNA from alignment at P-wetherbeei_contig1421:2870..5030- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1421.1.4 ID=mRNA_P-wetherbeei_contig1421.1.4|Name=mRNA_P-wetherbeei_contig1421.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2161bp|location=Sequence derived from alignment at P-wetherbeei_contig1421:2870..5030- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1421:2870..5030- >mRNA_P-wetherbeei_contig1421.1.4 ID=mRNA_P-wetherbeei_contig1421.1.4|Name=mRNA_P-wetherbeei_contig1421.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1026bp|location=Sequence derived from alignment at P-wetherbeei_contig1421:2870..5030- (Phaeothamnion wetherbeei SAG_119_79)back to top |