mRNA_P-wetherbeei_contig10347.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10347.2.1 vs. uniprot
Match: A0A4D9DG01_9STRA (Fe-S_biosyn domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG01_9STRA) HSP 1 Score: 163 bits (413), Expect = 2.160e-49 Identity = 78/119 (65.55%), Postives = 99/119 (83.19%), Query Frame = 1 Query: 13 VIVTPACATRIKKLRQMKGQEGLRLRLSVEGGGCSGFSYSFNVEDAPPDPETDRVFAHDGAELVVDETSFEFVRGATVDFADDMMRSAFAVINNPNSENACGCGSSFALKNFESNPAVD 369 V+VT AC RIK L+ G+E L+LRLSVEGGGCSGF+Y+F +ED P + + D+V+ +GA++VVDE S EFVRG+TVDF +DMMRSAFAV++NP SE+ACGCGSSFA+KNFE NPA+D Sbjct: 7 VVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDD-DKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAIKNFEKNPAID 124
BLAST of mRNA_P-wetherbeei_contig10347.2.1 vs. uniprot
Match: W7UC88_9STRA (Iron-sulfur cluster assembly 2 mitochondrial-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UC88_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.840e-48 Identity = 78/119 (65.55%), Postives = 99/119 (83.19%), Query Frame = 1 Query: 13 VIVTPACATRIKKLRQMKGQEGLRLRLSVEGGGCSGFSYSFNVEDAPPDPETDRVFAHDGAELVVDETSFEFVRGATVDFADDMMRSAFAVINNPNSENACGCGSSFALKNFESNPAVD 369 V+VT AC RIK L+ G+E L+LRLSVEGGGCSGF+Y+F +ED P + + D+V+ +GA++VVDE S EFVRG+TVDF +DMMRSAFAV++NP SE+ACGCGSSFA+KNFE NPA+D Sbjct: 76 VVVTNACIKRIKALQVKTGKENLKLRLSVEGGGCSGFTYTFTMEDGPVEDD-DKVYGREGAQVVVDEGSLEFVRGSTVDFTEDMMRSAFAVVSNPLSESACGCGSSFAMKNFEKNPAID 193
BLAST of mRNA_P-wetherbeei_contig10347.2.1 vs. uniprot
Match: A0A7S2RUW2_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RUW2_9STRA) HSP 1 Score: 155 bits (392), Expect = 9.990e-46 Identity = 72/119 (60.50%), Postives = 92/119 (77.31%), Query Frame = 1 Query: 13 VIVTPACATRIKKLRQMKGQEGLRLRLSVEGGGCSGFSYSFNVEDAPPDPETDRVFAHDGAELVVDETSFEFVRGATVDFADDMMRSAFAVINNPNSENACGCGSSFALKNFESNPAVD 369 ++VT +CA RI +L++ E ++LRL+VEGGGCSGF Y F+++ P D E D VF DGA +V+DE S EFV GATVDF ++M+RS+F V+NNPNSE+ACGCGSSFALK F NPAVD Sbjct: 41 IVVTKSCARRILELQKESSSEYVKLRLTVEGGGCSGFQYQFHMDSEPVDEEEDSVFERDGASVVIDEASLEFVTGATVDFVEEMIRSSFVVVNNPNSESACGCGSSFALKAFSDNPAVD 159
BLAST of mRNA_P-wetherbeei_contig10347.2.1 vs. uniprot
Match: A0A835ZPC5_9STRA (Fe-S_biosyn domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPC5_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.120e-45 Identity = 79/125 (63.20%), Postives = 97/125 (77.60%), Query Frame = 1 Query: 7 DMVIVTPACATRIKKLRQMKGQEG-LRLRLSVEGGGCSGFSYSFNVEDAPPDPETDR---VFAHDGAELVVDETSFEFVRGATVDFADDMMRSAFAVINNPNSENACGCGSSFALKNFESNPAVD 369 D VIVT +CA RI +LR+ +G + LRLRLSVEGGGCSGF Y+F ++D D E D +F DGA++V+DE S FV+GATVDF DMMR+AF+V+NNPNSENACGCGSSFA+K FE+NPA D Sbjct: 109 DAVIVTKSCAERINQLRKRRGGDAPLRLRLSVEGGGCSGFQYTFTMDDGTGDEEIDTPDIIFERDGAQVVIDEVSLGFVKGATVDFQQDMMRAAFSVLNNPNSENACGCGSSFAVKAFEANPARD 233
BLAST of mRNA_P-wetherbeei_contig10347.2.1 vs. uniprot
Match: A0A6H5KCK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK6_9PHAE) HSP 1 Score: 154 bits (390), Expect = 2.020e-44 Identity = 83/146 (56.85%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 1 FADMVIVTPACATRIKKLRQMKGQEGLRLRLSVEGGGCSGFSYSFNVEDAP-----------------------PDPETDRVFAHDGAELVVDETSFEFVRGATVDFADDMMRSAFAVINNPNSENACGCGSSFALKNFESNPAVD 369 F D +IVT CA R+ +LRQ K Q L+LRLSVEGGGCSGF Y F++EDA F DGA LVVD TS EFV+GATVDF +DMMRSAFAV+NNP SE+ACGCGSSFALKNFE NPA+D Sbjct: 92 FGDTIIVTKRCAERLNELRQAKAQPDLKLRLSVEGGGCSGFQYKFSLEDAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEFERDGAVLVVDATSLEFVKGATVDFEEDMMRSAFAVLNNPVSESACGCGSSFALKNFEKNPALD 237
BLAST of mRNA_P-wetherbeei_contig10347.2.1 vs. uniprot
Match: A0A7S3NJQ0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJQ0_9STRA) HSP 1 Score: 150 bits (380), Expect = 4.440e-44 Identity = 79/122 (64.75%), Postives = 93/122 (76.23%), Query Frame = 1 Query: 7 DMVIVTPACATRIKKLRQMKGQEGLRLRLSVEGGGCSGFSYSFNVEDAPPD-PETDRVFAHDGAELVVDETSFEFVRGATVDFADDMMRSAFAVINNPNSENACGCGSSFALKNFESNPAVD 369 D +IVT A A RI L+ G E RLRL V+GGGCSGF Y+F E A E D VF+ DG ++VVDETS EFVRGATVD+ ++M+RSAF VINNPNSE+ACGCGSSFALKNF+SNPA+D Sbjct: 26 DGLIVTAAAAKRIAVLKTNDG-EASRLRLGVDGGGCSGFQYTFTTEAATAKLAEDDSVFSRDGHDVVVDETSLEFVRGATVDYQEEMIRSAFVVINNPNSESACGCGSSFALKNFDSNPAID 146
BLAST of mRNA_P-wetherbeei_contig10347.2.1 vs. uniprot
Match: A0A7S2CX78_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CX78_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.420e-38 Identity = 69/121 (57.02%), Postives = 87/121 (71.90%), Query Frame = 1 Query: 13 VIVTPACATRIKKLRQMKGQEGLR--LRLSVEGGGCSGFSYSFNVEDAPPDPETDRVFAHDGAELVVDETSFEFVRGATVDFADDMMRSAFAVINNPNSENACGCGSSFALKNFESNPAVD 369 +I+T +CA RI L LRLSVEGGGCSGF YSF ++ + PE D F DG+ +V DE+S EFVRG+T+DF +M+RS+FAV+NNPNSE+ACGCGSSFALK+F NPA+D Sbjct: 42 LIITKSCARRIANLNAHAADTSPSKYLRLSVEGGGCSGFQYSFELDGSELGPE-DLTFERDGSRVVTDESSLEFVRGSTIDFTQEMIRSSFAVVNNPNSESACGCGSSFALKSFSDNPALD 161
BLAST of mRNA_P-wetherbeei_contig10347.2.1 vs. uniprot
Match: A0A7S2G7Q7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7Q7_9STRA) HSP 1 Score: 131 bits (330), Expect = 4.980e-37 Identity = 62/95 (65.26%), Postives = 77/95 (81.05%), Query Frame = 1 Query: 85 LRLSVEGGGCSGFSYSFNVEDAPPDPETDRVFAHDGAELVVDETSFEFVRGATVDFADDMMRSAFAVINNPNSENACGCGSSFALKNFESNPAVD 369 LRLSVEGGGCSGF YSF ++ + PE D F DG+ +V DE+S EFVRG+T+DF +M+RS+FAV+NNPNSE+ACGCGSSFALK+F NPA+D Sbjct: 12 LRLSVEGGGCSGFQYSFELDGSELGPE-DLTFERDGSRVVTDESSLEFVRGSTIDFTQEMIRSSFAVVNNPNSESACGCGSSFALKSFSDNPALD 105
BLAST of mRNA_P-wetherbeei_contig10347.2.1 vs. uniprot
Match: B8BT66_THAPS (Fe-S_biosyn domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT66_THAPS) HSP 1 Score: 129 bits (324), Expect = 2.880e-35 Identity = 64/133 (48.12%), Postives = 89/133 (66.92%), Query Frame = 1 Query: 19 VTPACATRIKKLRQMK-GQEGLRLRLSVEGGGCSGFSYSF---------------NVEDAPPDPETDRVFAHDGAELVVDETSFEFVRGATVDFADDMMRSAFAVINNPNSENACGCGSSFALKNFESNPAVD 369 +T +CA RIK+L + + + LRL V+ GGCSGF Y F + ED DP+ D +F DG +VVD+TS E +RG+T+D+ +M+RS+FAV++NP SE+ACGCGSSFA+KNFE+NPA+D Sbjct: 39 ITASCAARIKQLASTRPNPDSIYLRLYVDAGGCSGFQYKFLLLSEDNDMNNSLEDDEEDGAIDPDEDIIFVKDGMRVVVDQTSLELLRGSTIDYVQEMIRSSFAVMSNPQSESACGCGSSFAVKNFETNPALD 171
BLAST of mRNA_P-wetherbeei_contig10347.2.1 vs. uniprot
Match: A0A7S1Z1W8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z1W8_TRICV) HSP 1 Score: 127 bits (320), Expect = 6.670e-35 Identity = 68/144 (47.22%), Postives = 88/144 (61.11%), Query Frame = 1 Query: 7 DMVIVTPACATRIKKLRQMKGQ-EGLRLRLSVEGGGCSGFSYSFNVEDAPP----------------------DPETDRVFAHDGAELVVDETSFEFVRGATVDFADDMMRSAFAVINNPNSENACGCGSSFALKNFESNPAVD 369 D V+VT +CA RI +L + + + LR+ V+ GGCSGF Y F +E DP+ D VF DGA +V+D +S E +RG+TVDF +M+RS+FAVI NP SE+ACGCGSSFA+KNFE NPAVD Sbjct: 9 DGVVVTASCAARILQLSSKRDDADSVYLRVYVDAGGCSGFQYKFELEGEAGESXXXXXXXXXXXXXXXXVVGIDPDEDVVFVKDGARVVIDRSSLELIRGSTVDFVREMIRSSFAVIGNPQSESACGCGSSFAVKNFEENPAVD 152 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10347.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10347.2.1 >prot_P-wetherbeei_contig10347.2.1 ID=prot_P-wetherbeei_contig10347.2.1|Name=mRNA_P-wetherbeei_contig10347.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp MVIVTPACATRIKKLRQMKGQEGLRLRLSVEGGGCSGFSYSFNVEDAPPDback to top mRNA from alignment at P-wetherbeei_contig10347:1596..2364+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10347.2.1 ID=mRNA_P-wetherbeei_contig10347.2.1|Name=mRNA_P-wetherbeei_contig10347.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=769bp|location=Sequence derived from alignment at P-wetherbeei_contig10347:1596..2364+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10347:1596..2364+ >mRNA_P-wetherbeei_contig10347.2.1 ID=mRNA_P-wetherbeei_contig10347.2.1|Name=mRNA_P-wetherbeei_contig10347.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig10347:1596..2364+ (Phaeothamnion wetherbeei SAG_119_79)back to top |