mRNA_P-wetherbeei_contig14195.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14195.1.1
Unique NamemRNA_P-wetherbeei_contig14195.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14195.1.1 vs. uniprot
Match: A0A7S3HJI7_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJI7_9STRA)

HSP 1 Score: 130 bits (328), Expect = 8.670e-33
Identity = 63/125 (50.40%), Postives = 87/125 (69.60%), Query Frame = 1
Query:    7 TPLPLGQIYALMLVQATEAINVSILFPFLVFMVEDFGFIGHELGPATGLLAAAFCGAQVCSSLPWGWVSDRHGRKPSLLIGLLGSGAAMVAFGASTTYESAVVWRFCAGLLNGNLAAVKSIMVRV 381
            TPLP  QI+ + +VQ  EA+NV +LFPFL FM+ED G+ G +LG   G+LAA+FCGAQ C+S+ WG +SD +GRK +++ G LG+G  M+ FG S T+  A++ R   G LNGNL  VKS +  +
Sbjct:   24 TPLPKLQIFCVCMVQMAEAMNVELLFPFLAFMIEDMGYTGEQLGYHAGILAASFCGAQFCTSVAWGMISDIYGRKFAMVAGTLGAGLGMLIFGFSKTFYLAILGRIVGGFLNGNLGVVKSFITEI 148          
BLAST of mRNA_P-wetherbeei_contig14195.1.1 vs. uniprot
Match: A0A1S8VRY0_9FUNG (MFS domain-containing protein n=3 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VRY0_9FUNG)

HSP 1 Score: 112 bits (280), Expect = 2.490e-26
Identity = 56/124 (45.16%), Postives = 80/124 (64.52%), Query Frame = 1
Query:    7 TPLPLGQIYALMLVQATEAINVSILFPFLVFMVEDFGFI--GHELGPATGLLAAAFCGAQVCSSLPWGWVSDRHGRKPSLLIGLLGSGAAMVAFGASTTYESAVVWRFCAGLLNGNLAAVKSIM 372
            TPLP  Q+  + +V   E +   ILFPF+ FMV D G      ++G   G+LA++FC AQ+ +SLPWGW+SDR+GR+P LL GL+G+      FG S TY  A++ R   GL+NGN+  +KS++
Sbjct:   86 TPLPFRQMLLICVVTFVEPVQFGILFPFVYFMVRDLGIATDDRDIGFYVGMLASSFCVAQLFTSLPWGWISDRYGRRPVLLFGLVGNIITCALFGTSETYAFALIMRTLGGLMNGNIGVIKSMI 209          
BLAST of mRNA_P-wetherbeei_contig14195.1.1 vs. uniprot
Match: A0A1Y1Z834_9FUNG (MFS general substrate transporter n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z834_9FUNG)

HSP 1 Score: 111 bits (278), Expect = 2.820e-26
Identity = 59/129 (45.74%), Postives = 83/129 (64.34%), Query Frame = 1
Query:    1 DTTPLPLGQIYALMLVQATEAINVSILFPFLVFMVE--DFGFIGHELGPATGLLAAAFCGAQVCSSLPWGWVSDRHGRKPSLLIGLLGSGAAMVAFGASTTYESAVVWRFCAGLLNGNLAAVKSIMVRV 381
            + TPLP  Q+  L LV+  E IN +ILFPF+  MV     G    ++G   GL+AA+F  AQ  S +PWGW+SDR GRKP +L+GLLGS   ++ FG S +Y  A++ R  AG+LNGN+  +KS++  +
Sbjct:   10 EITPLPTKQLVILCLVRLAEPINYTILFPFMYRMVRWLKVGESEEDVGSYAGLVAASFAIAQFFSGVPWGWLSDRIGRKPVILMGLLGSTIGIIMFGLSQSYAMAIISRSIAGILNGNIGVIKSLLAEI 138          
BLAST of mRNA_P-wetherbeei_contig14195.1.1 vs. uniprot
Match: A0A507ENX5_9FUNG (MFS domain-containing protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507ENX5_9FUNG)

HSP 1 Score: 110 bits (274), Expect = 1.160e-25
Identity = 63/127 (49.61%), Postives = 78/127 (61.42%), Query Frame = 1
Query:    7 TPLPLGQIYALMLVQATEAINVSILFPFLVFMVEDFGFI--GHELGPATGLLAAAFCGAQVCSSLPWGWVSDRHGRKPSLLIGLLGSGAAMVAFGASTTYESAVVWRFCAGLLNGNLAAVKSIMVRV 381
            TPLP  Q+  LM V   E    +ILFPF+VFMVE FG       LG   G + AAF GAQ  S+LPWG +SDR GR+P LL+GL G+  A+V FG S + + AV  R   GLLNGN+   KS++  V
Sbjct:   51 TPLPTKQLVVLMAVILCEPFQFTILFPFIVFMVESFGVAPDSESLGYYVGFITAAFAGAQCISALPWGTLSDRIGRRPVLLLGLAGNACAIVLFGLSKSLKWAVAARTIGGLLNGNIGVAKSMLGEV 177          
BLAST of mRNA_P-wetherbeei_contig14195.1.1 vs. uniprot
Match: A0A1Y1Z0A3_9FUNG (MFS general substrate transporter n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z0A3_9FUNG)

HSP 1 Score: 108 bits (271), Expect = 2.660e-25
Identity = 57/127 (44.88%), Postives = 82/127 (64.57%), Query Frame = 1
Query:    7 TPLPLGQIYALMLVQATEAINVSILFPFLVFMVE--DFGFIGHELGPATGLLAAAFCGAQVCSSLPWGWVSDRHGRKPSLLIGLLGSGAAMVAFGASTTYESAVVWRFCAGLLNGNLAAVKSIMVRV 381
            TPLP  Q+  L LV+  E IN +ILFPF+  MV+    G    ++    GL+AA+F  AQ  S +PWGW+SDR GRKP +L+GLLGS   ++ FG S ++  A++ R  AG+LNGN+  +KS++  +
Sbjct:   12 TPLPTRQLIVLCLVRLAEPINYTILFPFMYRMVKWMKVGESEEDVSSYAGLIAASFAIAQFFSGIPWGWLSDRIGRKPVILMGLLGSTVGIIMFGLSQSFAMAIISRSLAGILNGNIGVIKSLLAEI 138          
BLAST of mRNA_P-wetherbeei_contig14195.1.1 vs. uniprot
Match: A0A507FJK1_9FUNG (MFS domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FJK1_9FUNG)

HSP 1 Score: 108 bits (269), Expect = 4.780e-25
Identity = 58/124 (46.77%), Postives = 81/124 (65.32%), Query Frame = 1
Query:    1 DTTPLPLGQIYALMLVQATEAINVSILFPFLVFMVEDFGFIGH--ELGPATGLLAAAFCGAQVCSSLPWGWVSDRHGRKPSLLIGLLGSGAAMVAFGASTTYESAVVWRFCAGLLNGNLAAVKS 366
            + TPLP  Q+  L ++   E I ++ILFPF+ FMV+DFG   +  E+G   GL+ + F  AQV SSLP GW+SD+ GR+P LL+GL G+  + + FG ST   +A+V RF  GL+NGN+   KS
Sbjct:   32 ERTPLPFKQMLVLCIINICEPIQLTILFPFIYFMVKDFGVAKNDSEIGWYVGLITSLFSFAQVLSSLPIGWLSDKIGRRPVLLLGLAGNMFSSILFGLSTNLPAAIVSRFLLGLVNGNIGVAKS 155          
BLAST of mRNA_P-wetherbeei_contig14195.1.1 vs. uniprot
Match: A0A139AWN7_GONPJ (MFS general substrate transporter n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AWN7_GONPJ)

HSP 1 Score: 107 bits (268), Expect = 8.680e-25
Identity = 59/128 (46.09%), Postives = 77/128 (60.16%), Query Frame = 1
Query:    4 TTPLPLGQIYALMLVQATEAINVSILFPFLVFMVEDFGFIGHE--LGPATGLLAAAFCGAQVCSSLPWGWVSDRHGRKPSLLIGLLGSGAAMVAFGASTTYESAVVWRFCAGLLNGNLAAVKSIMVRV 381
            TTPLP  Q++ + +V  TE +  SILFPF+ FMV DF     E  LG   G+LA+ F  AQ  S+LPWGWVSD+ GR+P LLIGLL +    +AFG S +Y  A+  R   G  N N    KS++  +
Sbjct:   45 TTPLPTMQLFVVSIVALTEFVQQSILFPFVYFMVRDFKIAADERQLGTYVGILASTFSIAQFFSNLPWGWVSDKWGRRPVLLIGLLANSICALAFGMSKSYSWALGVRILQGAFNANTGVAKSVVAEI 172          
BLAST of mRNA_P-wetherbeei_contig14195.1.1 vs. uniprot
Match: A0A507DRW9_9FUNG (MFS domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507DRW9_9FUNG)

HSP 1 Score: 107 bits (267), Expect = 1.540e-24
Identity = 56/128 (43.75%), Postives = 83/128 (64.84%), Query Frame = 1
Query:    1 DTTPLPLGQIYALMLVQATEAINVSILFPFLVFMVEDFGFIGH-ELGPATGLLAAAFCGAQVCSSLPWGWVSDRHGRKPSLLIGLLGSGAAMVAFGASTTYESAVVWRFCAGLLNGNLAAVKSIMVRV 381
              TPLP+  I +L  V   E +++++LFPF+ FMV DFG     E+G   G +A++F  AQ C+SL WGW+S+R GRKP LLIGL+G+  +++ FG + T ++A+  R   G+LNGN+   K I+  V
Sbjct:  645 QATPLPVNIITSLSFVIICEPLSLTVLFPFIYFMVRDFGISDDKEVGFYVGFIASSFSLAQFCTSLCWGWISERTGRKPVLLIGLIGNAISLLLFGQAHTLQAAIASRMLCGMLNGNVGICKCIIGEV 772          
BLAST of mRNA_P-wetherbeei_contig14195.1.1 vs. uniprot
Match: A0A507DAF7_9FUNG (MFS domain-containing protein (Fragment) n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507DAF7_9FUNG)

HSP 1 Score: 107 bits (267), Expect = 1.540e-24
Identity = 56/128 (43.75%), Postives = 83/128 (64.84%), Query Frame = 1
Query:    1 DTTPLPLGQIYALMLVQATEAINVSILFPFLVFMVEDFGFIGH-ELGPATGLLAAAFCGAQVCSSLPWGWVSDRHGRKPSLLIGLLGSGAAMVAFGASTTYESAVVWRFCAGLLNGNLAAVKSIMVRV 381
              TPLP+  I +L  V   E +++++LFPF+ FMV DFG     E+G   G +A++F  AQ C+SL WGW+S+R GRKP LLIGL+G+  +++ FG + T ++A+  R   G+LNGN+   K I+  V
Sbjct:  586 QATPLPVNIITSLSFVIICEPLSLTVLFPFIYFMVRDFGISDDKEVGFYVGFIASSFSLAQFCTSLCWGWISERTGRKPVLLIGLIGNAISLLLFGQAHTLQAAIASRMLCGMLNGNVGICKCIIGEV 713          
BLAST of mRNA_P-wetherbeei_contig14195.1.1 vs. uniprot
Match: A0A7S3D7Y4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D7Y4_9EUKA)

HSP 1 Score: 104 bits (260), Expect = 1.110e-23
Identity = 59/127 (46.46%), Postives = 82/127 (64.57%), Query Frame = 1
Query:    1 DTTPLPLGQIYALMLVQATEAINVSILFPFLVFMVEDFGFIGHELGPATGLLAAAFCGAQVCSSLPWGWVSDRHGRKPSLLIGLLGSGAAMVAFGASTTYESAVVWRFCAGLLNGNLAAVKSIMVRV 381
            + TPL L   + L L+ A EA  +++L+ F+ FMVEDFG    ELG   G L A+F  AQ+ +S  W  VSDR+GR+P+++IG +GSGAAM+ FG S  Y  AV++R   G LNGN+A  K+ +  V
Sbjct:   96 EVTPLIL---FLLSLINANEAFGLNVLWSFVAFMVEDFGVPSSELGSFVGPLTASFFLAQLVASFFWAAVSDRYGRRPAIVIGCIGSGAAMILFGFSKQYWQAVLFRCMCGGLNGNIAVTKTYLGEV 219          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14195.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3HJI7_9STRA8.670e-3350.40Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A1S8VRY0_9FUNG2.490e-2645.16MFS domain-containing protein n=3 Tax=Batrachochyt... [more]
A0A1Y1Z834_9FUNG2.820e-2645.74MFS general substrate transporter n=1 Tax=Basidiob... [more]
A0A507ENX5_9FUNG1.160e-2549.61MFS domain-containing protein n=1 Tax=Spizellomyce... [more]
A0A1Y1Z0A3_9FUNG2.660e-2544.88MFS general substrate transporter n=1 Tax=Basidiob... [more]
A0A507FJK1_9FUNG4.780e-2546.77MFS domain-containing protein n=1 Tax=Chytriomyces... [more]
A0A139AWN7_GONPJ8.680e-2546.09MFS general substrate transporter n=1 Tax=Gonapody... [more]
A0A507DRW9_9FUNG1.540e-2443.75MFS domain-containing protein n=2 Tax=Chytriomyces... [more]
A0A507DAF7_9FUNG1.540e-2443.75MFS domain-containing protein (Fragment) n=1 Tax=C... [more]
A0A7S3D7Y4_9EUKA1.110e-2346.46Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14195contigP-wetherbeei_contig14195:309..939 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog109760.SPPG_01717T0
PFAMsMFS_1
Model size381
Max annot lvl4751|Fungi
Hectar predicted targeting categorysignal peptide
Exons2
Evalue1.56e-22
EggNOG OGsKOG2615@1|root,KOG2615@2759|Eukaryota,38FGP@33154|Opisthokonta,3NVFU@4751|Fungi
Descriptionmfs general substrate transporter
Cds size381
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186012.4066777-CDS-P-wetherbeei_contig14195:308..5471683186012.4066777-CDS-P-wetherbeei_contig14195:308..547Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14195 309..547 -
1683186012.4176078-CDS-P-wetherbeei_contig14195:797..9391683186012.4176078-CDS-P-wetherbeei_contig14195:797..939Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14195 798..939 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14195.1.1prot_P-wetherbeei_contig14195.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14195 309..939 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14195.1.1

>prot_P-wetherbeei_contig14195.1.1 ID=prot_P-wetherbeei_contig14195.1.1|Name=mRNA_P-wetherbeei_contig14195.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=127bp
DTTPLPLGQIYALMLVQATEAINVSILFPFLVFMVEDFGFIGHELGPATG
LLAAAFCGAQVCSSLPWGWVSDRHGRKPSLLIGLLGSGAAMVAFGASTTY
ESAVVWRFCAGLLNGNLAAVKSIMVRV
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mRNA from alignment at P-wetherbeei_contig14195:309..939-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14195.1.1 ID=mRNA_P-wetherbeei_contig14195.1.1|Name=mRNA_P-wetherbeei_contig14195.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=631bp|location=Sequence derived from alignment at P-wetherbeei_contig14195:309..939- (Phaeothamnion wetherbeei SAG_119_79)
GACACGACGCCCCTCCCACTTGGTCAGATCTACGCTTTGATGCTGGTTCA AGCGACAGAGGCCATCAACGTCTCCATCCTATTTCCATTTCTTGTCTTTA TGGTGGAAGACTTTGGCTTCATCGGCCACGAACTCGGGCCAGGTATGCCG ATTTGCATCGATCTATTTGTCTTTGCAGCAGCCGGTTCTGGATGTTTGGA TGCAGGCATCGGCAGGAAGCTTTCATCGGCTGTAATGCTGCAGCTTTTGA AGTGGAAGAGATCGCTCGCTCTGAGGACCGCATGCCTGACGTCACACTTG CCCACAACTTTCAATCTCGCCAAGTACCAGCCAATCGCCCCCTTCCTCAC CACATCCTTTTAATCTCTATTCCCTTCCGTTTGCGCCGCCAGCGACGGGG CTCCTGGCCGCCGCCTTTTGCGGCGCCCAGGTCTGCTCGTCGCTGCCGTG GGGCTGGGTGAGCGACCGCCACGGACGCAAGCCGAGTCTGCTCATTGGCC TGCTGGGGTCCGGCGCCGCCATGGTCGCCTTCGGTGCGTCCACAACGTAC GAGTCCGCCGTCGTTTGGCGTTTCTGCGCCGGCTTGCTCAACGGAAACCT GGCCGCCGTTAAAAGCATCATGGTGAGGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14195:309..939-

>mRNA_P-wetherbeei_contig14195.1.1 ID=mRNA_P-wetherbeei_contig14195.1.1|Name=mRNA_P-wetherbeei_contig14195.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig14195:309..939- (Phaeothamnion wetherbeei SAG_119_79)
GACACGACGCCCCTCCCACTTGGTCAGATCTACGCTTTGATGCTGGTTCA
AGCGACAGAGGCCATCAACGTCTCCATCCTATTTCCATTTCTTGTCTTTA
TGGTGGAAGACTTTGGCTTCATCGGCCACGAACTCGGGCCAGCGACGGGG
CTCCTGGCCGCCGCCTTTTGCGGCGCCCAGGTCTGCTCGTCGCTGCCGTG
GGGCTGGGTGAGCGACCGCCACGGACGCAAGCCGAGTCTGCTCATTGGCC
TGCTGGGGTCCGGCGCCGCCATGGTCGCCTTCGGTGCGTCCACAACGTAC
GAGTCCGCCGTCGTTTGGCGTTTCTGCGCCGGCTTGCTCAACGGAAACCT
GGCCGCCGTTAAAAGCATCATGGTGAGGGTG
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