mRNA_P-wetherbeei_contig10347.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A835ZDB5_9STRA (Mef2, mitochondrial translation elongation factor EF-G n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDB5_9STRA) HSP 1 Score: 310 bits (795), Expect = 1.950e-97 Identity = 162/248 (65.32%), Postives = 190/248 (76.61%), Query Frame = 1 Query: 43 VRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYIA 786 +RN+G+IAHIDAGKTTTTERMLY+VG+TRHQGSVDTGDTVTDF+PQERERGITIQSAAVS+ W HVNLIDTPGHVDFS+EVER +RVLDGAVLV+DAVAGVQAQTETVWRTA VPA+AFVNKMDR GADF A +L RLG TPLPIQ+P+GS GG+ GAVDL+ M+ +Y G G D+V L ++L E PG++ AAAARA LL G+AE DE F++TY++ Sbjct: 4 IRNLGIIAHIDAGKTTTTERMLYIVGDTRHQGSVDTGDTVTDFMPQERERGITIQSAAVSVEWNGHHVNLIDTPGHVDFSIEVERAVRVLDGAVLVLDAVAGVQAQTETVWRTATSHNVPAIAFVNKMDRQGADFNIAVQTLRNRLGVTPLPIQLPIGSEGGFKGAVDLIAMEGLVYQPGGRWEGDV-------------DTVELRRVALGELEGGCPGLSAAAAAARAELLMGMAEADEAFMDTYLS 238
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: D7G8E9_ECTSI (Mef2, mitochondrial translation elongation factor EF-G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E9_ECTSI) HSP 1 Score: 284 bits (726), Expect = 1.190e-86 Identity = 150/248 (60.48%), Postives = 181/248 (72.98%), Query Frame = 1 Query: 40 RVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYI 783 R+RNIG+IAHIDAGKTTTTER+LYL G+ QGSVD+GDTVTDF+PQERERGITIQSAAV++ W +N+IDTPGHVDF +EVERC RVLDGAVLV+D VAGVQAQTETVWRTA ++PA+AFVNK+DR GADF +L RRLG PLP+Q+P+G+ + G VDL+TM A LY AG G +A+ARDSV + L A ++ PG +RA AAR LL LA+ DE F E + Sbjct: 77 RIRNIGIIAHIDAGKTTTTERILYLTGKITRQGSVDSGDTVTDFMPQERERGITIQSAAVTVEWGGGRINVIDTPGHVDFGLEVERCARVLDGAVLVLDGVAGVQAQTETVWRTAQKHEIPAIAFVNKLDRQGADFKHVLGTLERRLGVLPLPLQIPVGTGTDFVGMVDLVTMTAILYQ--------AGADGLGKMRASARDSVTFVTLPLDHANDIFPGTVKRANAARQELLWALADADEAFAELVL 316
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A4D9DDG5_9STRA (Tr-type G domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDG5_9STRA) HSP 1 Score: 282 bits (722), Expect = 5.940e-86 Identity = 152/246 (61.79%), Postives = 182/246 (73.98%), Query Frame = 1 Query: 46 RNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYI 783 RNIG+IAHIDAGKTTTTER+LYL GET H G VDTGDTV DFLPQERERGITIQSAA+SL W + +N+IDTPGHVDF++EVER +R+LDGA +VVDAVAGVQAQTETVWR A ++VP +AFVNKMDRDGADF RA SL RRLGA +P+Q+PLG+ G + G VDLLTM+ ++ + + APK+ R SV LT LA ++ A AR ALLE LA+ DE F+ETY+ Sbjct: 55 RNIGIIAHIDAGKTTTTERILYLAGETGHVGDVDTGDTVMDFLPQERERGITIQSAAISLDWHDTRINIIDTPGHVDFTMEVERAVRILDGAAVVVDAVAGVQAQTETVWRQARKYKVPTIAFVNKMDRDGADFPRAVQSLRRRLGAPAVPVQLPLGAGGDFQGVVDLLTMEEVVWEAPQTSGTNPSPLTPFAPKSKRR-SVCLTRRPLAGGDKTKEERLMAAREARVALLEALADADETFMETYL 299
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: W7TIG4_9STRA (Translation elongation factor g n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIG4_9STRA) HSP 1 Score: 284 bits (727), Expect = 4.700e-85 Identity = 154/250 (61.60%), Postives = 185/250 (74.00%), Query Frame = 1 Query: 34 LIRVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYI 783 L + RNIG+IAHIDAGKTTTTER+LYL GET H G VDTGDTV DFLPQERERGITIQSAA+SL W + +N+IDTPGHVDF++EVER +RVLDGA +VVDAVAGVQAQTETVWR A ++VP +AFVNKMDRDGADF RA SL RRLGA +P+Q+PLG+ G + G VDLLTM+ ++ + + +APK+ R SV LT LA ++ A AR ALLE LA+ DE F+ETY+ Sbjct: 51 LKKCRNIGIIAHIDAGKTTTTERILYLAGETGHVGDVDTGDTVMDFLPQERERGITIQSAAISLDWHDTRINIIDTPGHVDFTMEVERAVRVLDGAAVVVDAVAGVQAQTETVWRQARKYKVPTIAFVNKMDRDGADFPRAVQSLRRRLGAPAVPVQLPLGAGGDFQGVVDLLTMEEVVWEAPQTSGKNPSPLTPSAPKSKRR-SVCLTRRPLAGGDKTKEERLMAAREARVALLEALADADETFMETYL 299
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A812ZX76_9DINO (FusA protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZX76_9DINO) HSP 1 Score: 235 bits (599), Expect = 3.210e-72 Identity = 123/251 (49.00%), Postives = 167/251 (66.53%), Query Frame = 1 Query: 40 RVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYIAGE 792 R+RNIG++AHIDAGKTTTTER+L+L G +R G V GDT+ D+LP ERERGITI SAA+S W N +NLIDTPGHVDF+VEVER +RVLDGA+ + D VAGV+AQ+ETVW AD + VP + FVNKMDR+GA + R A ++ RLGATP+ Q+PLG A + G VDL++M++ L+ + ++ + L + P I E+A + R A+LE +A+ D+ F E ++ G+ Sbjct: 3 RIRNIGIMAHIDAGKTTTTERLLFLSGYSRRVGEVHDGDTIMDYLPLERERGITINSAAISFQWANHDINLIDTPGHVDFTVEVERSLRVLDGAIAIFDGVAGVEAQSETVWEQADRYGVPRIGFVNKMDREGASYERTAAAMAARLGATPVLCQLPLGEAAEFQGIVDLISMRSYLWKD--------------------EEELSFKEVPLTS---YSPAIAEKAESQRLAMLEAVADADDTFAEVFLDGK 230
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A7C1G3B8_9CHLR (Elongation factor G n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1G3B8_9CHLR) HSP 1 Score: 242 bits (618), Expect = 6.120e-72 Identity = 132/261 (50.57%), Postives = 168/261 (64.37%), Query Frame = 1 Query: 19 AREAALIRVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDP---GITERAAAARAALLEGLAEVDEPFLETYIAGE 792 AR+ AL ++RNIG+IAHIDAGKTTTTER+L+ G T GSVD G TD++PQERERGITI +AA++ WR+ +N+IDTPGH+DF+ EV+R +RVLDG V+V DAVAGV+ Q+ETVWR AD ++VP V FVNKMDR GADF R + RLGATP+PIQ+P+G G + GAVDLLTMQA Y+ L A + P + A AAR A++E + E D+ L Y+ GE Sbjct: 2 ARQFALEKIRNIGIIAHIDAGKTTTTERILFYTGRTHRLGSVDEGTATTDWMPQERERGITITAAAITAYWRDHQINIIDTPGHIDFTAEVQRSLRVLDGGVVVFDAVAGVEPQSETVWRQADRYRVPRVCFVNKMDRTGADFHRTVAMIRERLGATPVPIQLPIGVEGSFRGAVDLLTMQAVTYTDE-----------------------------LGAHRQYGPIPDELVGAAQAAREAMIEHIVETDDALLHKYLEGE 233
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A0S8KNP0_9CHLR (Elongation factor G (Fragment) n=1 Tax=Anaerolineae bacterium SM23_84 TaxID=1703388 RepID=A0A0S8KNP0_9CHLR) HSP 1 Score: 229 bits (583), Expect = 6.560e-72 Identity = 110/178 (61.80%), Postives = 140/178 (78.65%), Query Frame = 1 Query: 40 RVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALY 573 R+RNIG+IAHIDAGKTTTTER+L GET G+VD G TVTDF+ QERERGITIQ+AAV+ W++ +N+IDTPGH+DF+ EV+R +RVLDG V++ DAV+GV+ Q+ETVWR AD F VP +AFVNKMDR GADFAR + + RLGA P+ +Q+P+G+ + G VDLL M A L+ Sbjct: 14 RIRNIGIIAHIDAGKTTTTERILLHAGETHRMGNVDDGTTVTDFMDQERERGITIQAAAVTCDWKDHQINIIDTPGHIDFTAEVQRSLRVLDGGVVIFDAVSGVEPQSETVWRQADRFGVPRIAFVNKMDRPGADFARTLEMVRARLGANPVAVQMPIGAEAAFRGFVDLLEMTAVLF 191
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A7V3K237_9CHLR (GTP-binding protein (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V3K237_9CHLR) HSP 1 Score: 230 bits (586), Expect = 6.830e-71 Identity = 127/258 (49.22%), Postives = 164/258 (63.57%), Query Frame = 1 Query: 19 AREAALIRVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYIAGE 792 AR L RVRNIG+IAHIDAGKTTTTER+L+ G T G+VD G TVTD++ QERERGITI +AAV+ WR+ +N+IDTPGH+DF+ EV+R +RVLDG V++ DAVAGV+ Q+ETVWR AD + VP + F+NKMDR GADF RA + + RL A P+ +QVP+G + G VDL+T +A LY+ D + S E+L E A RA +LE + E D+ LE Y+ GE Sbjct: 2 ARPCPLERVRNIGMIAHIDAGKTTTTERVLFYAGRTHRMGNVDEGTTVTDWMEQERERGITITAAAVTCFWRDHQINIIDTPGHIDFTAEVQRSLRVLDGGVVIFDAVAGVEPQSETVWRQADRYGVPRICFINKMDRLGADFWRAVEMIRERLNANPVAVQVPIGVEASFQGLVDLITGKALLYA----------------------DDLGTVIRSTEVPEDL----REEVALRRAQMLEQIVETDDALLEQYLEGE 233
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A7V4ZFY9_9CHLR (Elongation factor G n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V4ZFY9_9CHLR) HSP 1 Score: 238 bits (608), Expect = 1.620e-70 Identity = 128/255 (50.20%), Postives = 161/255 (63.14%), Query Frame = 1 Query: 28 AALIRVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYIAGE 792 A L ++RNIG+IAHIDAGKTTTTER+LY G+T GSVD G TVTDFLPQERERGITIQSAAV+ W+ H+N+IDTPGH+DF+ EV+R +RVLDG V+V D VAGV+ Q+ETVWR AD F VP + FVNKMDR GA+FAR D RRL P+ +Q+P+GS + G VDLL M+A + G + P + A + R ++E LA+VD+ E Y+ GE Sbjct: 2 AELNQIRNIGIIAHIDAGKTTTTERILYHTGQTYRLGSVDEGTTVTDFLPQERERGITIQSAAVTCQWQGHHINIIDTPGHIDFTAEVQRSLRVLDGGVVVFDGVAGVEPQSETVWRQADRFGVPRIGFVNKMDRTGANFARVLDMARRRLSCNPIAVQIPIGSEASFEGVVDLLAMKAVRFDEDGQ----------------------------PVDGPIPPALEAEALSWRERMIEQLADVDDAIAERYLEGE 228
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A847FU03_9CHLR (Elongation factor G n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A847FU03_9CHLR) HSP 1 Score: 236 bits (603), Expect = 9.730e-70 Identity = 126/258 (48.84%), Postives = 166/258 (64.34%), Query Frame = 1 Query: 22 REAALIRVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYIAGEP 795 RE + R+RNIG+IAHIDAGKTTTTER+L+ G T G+VD G TVTD++ QERERGITI SAAV+ WRN +N++DTPGH+DF+ EV+R +RVLDG V+V DAV+GV+ Q+ETVWR AD + VP + FVNKMDR GADF D + +L A+P+PIQ+P+GS + G VDL TMQA LY+ D + + A +L P E+ R ++E +AE D+ +E Y+ G P Sbjct: 3 REYPIERIRNIGIIAHIDAGKTTTTERILFYTGRTHRMGNVDDGTTVTDWMEQERERGITITSAAVTCFWRNCQINIVDTPGHIDFTAEVQRSLRVLDGGVVVFDAVSGVEPQSETVWRQADRYHVPRICFVNKMDRLGADFWHTVDMIREQLAASPVPIQIPIGSEDRFRGLVDLFTMQAILYT----------------------DDLGSVQETTAIPADLVPFAEEQ----REQMVEKIAECDDALMEKYLEGAP 234 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10347.1.1 >prot_P-wetherbeei_contig10347.1.1 ID=prot_P-wetherbeei_contig10347.1.1|Name=mRNA_P-wetherbeei_contig10347.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp ALARRSAREAALIRVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTback to top mRNA from alignment at P-wetherbeei_contig10347:348..1145- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10347.1.1 ID=mRNA_P-wetherbeei_contig10347.1.1|Name=mRNA_P-wetherbeei_contig10347.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig10347:348..1145- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10347:348..1145- >mRNA_P-wetherbeei_contig10347.1.1 ID=mRNA_P-wetherbeei_contig10347.1.1|Name=mRNA_P-wetherbeei_contig10347.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig10347:348..1145- (Phaeothamnion wetherbeei SAG_119_79)back to top |