mRNA_P-wetherbeei_contig1419.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1419.3.1 vs. uniprot
Match: A0A316SB72_9FIRM (Uncharacterized protein n=1 Tax=Oscillospiraceae bacterium TaxID=2485925 RepID=A0A316SB72_9FIRM) HSP 1 Score: 73.9 bits (180), Expect = 7.820e-13 Identity = 54/132 (40.91%), Postives = 72/132 (54.55%), Query Frame = 1
Query: 4 FGRVPWAIAPFVFSMFVLVSALTAAGLTRAIADAAVVAGSECDGGGSFGSLVGTAAFFAASSALVVNVLNNLPATVL---VVDALPVLCRAYNRRRFSAAVMGLLVGLNVGAYLTLVGALAGLMWAAIMRSH 390
F R PW +APFV SMFVLV AL G+T A+ D S ++ GT F SS L N++NN+P +VL V+ ALP +AA+ +VG N+GA+ T +GALAG+MW +R H
Sbjct: 291 FVRAPWDLAPFVLSMFVLVLALEKHGVTAALGDVLT----------SPRTVAGTLLSFGGSSFLAANLVNNIPMSVLYRSVISALPA-----GAGNGTAALYAAVVGSNLGAFFTPMGALAGIMWTGQLRDH 407
BLAST of mRNA_P-wetherbeei_contig1419.3.1 vs. uniprot
Match: A0A410FWE6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Bipolaricaulis sibiricus TaxID=2501609 RepID=A0A410FWE6_9BACT) HSP 1 Score: 70.5 bits (171), Expect = 1.320e-11 Identity = 52/127 (40.94%), Postives = 67/127 (52.76%), Query Frame = 1
Query: 1 AFGRVPWAIAPFVFSMFVLVSALTAAGLTRAIADAAVVAGSECDGGGSFGSLVGTAAFFAASSALVVNVLNNLPATVLVVDALPVLCRAYNRRRFSAAVMGLLVGLNVGAYLTLVGALAGLMWAAIM 381
A RVPW I PFV S+FV V AL G+T + D + S GS+ A + SSAL NVLNN+P T+ A A + AA +G +G N+GA LT +GALAG+MW I+
Sbjct: 301 AMRRVPWPIVPFVLSLFVTVYALRVYGITGRLGDVLLAL--------SGGSVPLLAILYGVSSALAANVLNNIPMTLAFASA----TGALSGMPLLAAALGTAIGSNLGANLTPIGALAGIMWMTIL 415
BLAST of mRNA_P-wetherbeei_contig1419.3.1 vs. uniprot
Match: A0A3D2K9R0_9FIRM (Uncharacterized protein (Fragment) n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A3D2K9R0_9FIRM) HSP 1 Score: 66.2 bits (160), Expect = 1.410e-10 Identity = 50/133 (37.59%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 10 RVPWAIAPFVFSMFVLVSALTAAGLTRAIADAAVVAGSECDGGGSFGSLVG---TAAFFAASSALVVNVLNNLPATVL---VVDALPVLCRAYNRRRFSAAVMGLLVGLNVGAYLTLVGALAGLMWAAIMRSH 390
R PW + PFV SMFVL+ AL G+T I GSL+G T A + A S L NV+NN+P +VL +V LP + A ++G N+GA+LT +GALAG+MW ++++ H
Sbjct: 90 RAPWQLVPFVLSMFVLILALEQQGVTAKI-----------------GSLLGSKATIAKYGALSFLFANVINNIPMSVLFCPIVGTLPA-------GQTLPAAYATVIGSNLGAFLTPIGALAGIMWLSLLKKH 198
BLAST of mRNA_P-wetherbeei_contig1419.3.1 vs. uniprot
Match: A0A2V2FJU3_9FIRM (Uncharacterized protein n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A2V2FJU3_9FIRM) HSP 1 Score: 66.6 bits (161), Expect = 2.900e-10 Identity = 50/136 (36.76%), Postives = 72/136 (52.94%), Query Frame = 1
Query: 1 AFGRVPWAIAPFVFSMFVLVSALTAAGLTRAIADAAVVAGSECDGGGSFGSLVGTA---AFFAASSALVVNVLNNLPATVL---VVDALPVLCRAYNRRRFSAAVMGLLVGLNVGAYLTLVGALAGLMWAAIMRSH 390
A PW I PF+ SMFVLV AL G TR+I G+ +G+A A + SS L N++NN+P +VL VV LP +AA+ ++G N+GA+ T +GALAG+MW ++++H
Sbjct: 290 AIHAAPWEIVPFILSMFVLVLALDKYGFTRSI-----------------GAFLGSAHPVASYGVSSFLAANLINNIPMSVLFSSVVSDLP-------SSAHTAALYASVIGSNLGAFFTPLGALAGIMWTGMLKNH 401
BLAST of mRNA_P-wetherbeei_contig1419.3.1 vs. uniprot
Match: A0A7C5W6B9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5W6B9_9BACT) HSP 1 Score: 66.6 bits (161), Expect = 2.960e-10 Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 1
Query: 1 AFGRVPWAIAPFVFSMFVLVSALTAAGLTRAIADAAVVAGSECDGGGSFGSLVGTAAFFAASSALVVNVLNNLPATVLVVDALPVLCRAYNRRRFSAAVMGLLVGLNVGAYLTLVGALAGLMWAAIMRS 387
AF R+PW I PFV S+F+ V AL G+T ++ E GGS LV + +SAL N LNN+P T+ A+ R + AA + +G N+GA +T +GALAG+MW +I+++
Sbjct: 310 AFVRMPWTIVPFVLSLFITVGALHYYGVTSSLGRIL-----EAAAGGSCQRLVW---LYGLTSALAANALNNIPMTLAFASAM----REMTGQPLLAAALSTTIGSNLGANITPIGALAGIMWLSILKT 426
BLAST of mRNA_P-wetherbeei_contig1419.3.1 vs. uniprot
Match: UPI001EE2F9D0 (SLC13 family permease n=1 Tax=Faecalibacterium gallinarum TaxID=2903556 RepID=UPI001EE2F9D0) HSP 1 Score: 65.1 bits (157), Expect = 1.000e-9 Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = 1
Query: 10 RVPWAIAPFVFSMFVLVSALTAAGLTRAIADAAVVAGSECDGGGSFGSLVGTAAFFAASSALVVNVLNNLPATVLVVDALPVLCRAYNRRRFSAAVMGLLVGLNVGAYLTLVGALAGLMWAAIMRSH 390
++PWA+ PF+ SMFVL+ AL AG+T +A S D ++G A FAAS NV+NN+P +VL L C+A A V +++G N+GA LT VGALAG+MW +I++ H
Sbjct: 293 KLPWALTPFLLSMFVLILALNQAGVTETLAH------SLPDNPFAYGL-----ASFAAS-----NVINNIPMSVLFTSILGS-CQAT-----PAMVYAVILGSNLGALLTPVGALAGIMWLSIIKEH 397
BLAST of mRNA_P-wetherbeei_contig1419.3.1 vs. uniprot
Match: A0A842ZP86_9ARCH (Uncharacterized protein n=1 Tax=Thermoplasmata archaeon TaxID=1906666 RepID=A0A842ZP86_9ARCH) HSP 1 Score: 64.7 bits (156), Expect = 1.390e-9 Identity = 48/125 (38.40%), Postives = 66/125 (52.80%), Query Frame = 1
Query: 10 RVPWAIAPFVFSMFVLVSALTAAGLTRAIADAAVVAGSECDGGGSFGSLVGTAAFFAASSALVVNVLNNLPATVLVVDALPVLCRAYNRRRFSAAVMGLLVGLNVGAYLTLVGALAGLMWAAIMR 384
++P +I PFV SMF+ V AL G+TR D + S C S T + SSA NVLNN+P TV V + A + AV+ +G N+GA +T +GALAG+MW +I+R
Sbjct: 310 KMPLSIIPFVLSMFITVEALRIYGITR---DIGIFFNSLCGA-----STTATTFVYGISSAFAANVLNNIPMTVAYVP----IAGAVSHVNLLPAVLATTIGSNLGANITPIGALAGIMWMSILR 422
BLAST of mRNA_P-wetherbeei_contig1419.3.1 vs. uniprot
Match: A0A507C6E4_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C6E4_9FUNG) HSP 1 Score: 64.7 bits (156), Expect = 1.520e-9 Identity = 54/140 (38.57%), Postives = 72/140 (51.43%), Query Frame = 1
Query: 1 AFGRVPWAIAPFVFSMFVLVSALTAAGLTRAIADAAVVAGSECDGGGSFGSLVGTAAFFAAS--SALVVNVLNNLPATVLVVDAL--PVLCR------AYNRRRFSAAVMGLLVGLNVGAYLTLVGALAGLMWAAIMRSH 390
A R PW I PF MFVLV +L A T +A + C AA FA SAL ++LNNLP T+L V L P A+ ++ + AA+ GL+VG N+GA LT V +LAGLMW+ +++ H
Sbjct: 440 AISRCPWRIGPFALGMFVLVESLNALNWTAVLA---IGIARICQ--------TVPAAIFAIGFLSALACSLLNNLPMTILAVRILQHPNFSAGVGGDAAHQQQIYQAALWGLVVGSNIGADLTFVASLAGLMWSELLKMH 568
BLAST of mRNA_P-wetherbeei_contig1419.3.1 vs. uniprot
Match: A0A3D5B2R8_9FIRM (Uncharacterized protein n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A3D5B2R8_9FIRM) HSP 1 Score: 64.3 bits (155), Expect = 1.870e-9 Identity = 49/133 (36.84%), Postives = 69/133 (51.88%), Query Frame = 1
Query: 10 RVPWAIAPFVFSMFVLVSALTAAGLTRAIADAAVVAGSECDGGGSFGSLVG---TAAFFAASSALVVNVLNNLPATVL---VVDALPVLCRAYNRRRFSAAVMGLLVGLNVGAYLTLVGALAGLMWAAIMRSH 390
R PW + PFV MFVL+ AL G+T I GSL+G T A + A S L NV+NN+P +VL +V LP + A ++G N+GA+LT +GALAG+MW ++++ H
Sbjct: 293 RAPWQLVPFVLGMFVLILALEQQGVTAKI-----------------GSLLGAKATIAKYGALSFLSANVINNIPMSVLFCPIVGTLPA-------GQTLPAAYATVIGSNLGAFLTPIGALAGIMWLSLLKKH 401
BLAST of mRNA_P-wetherbeei_contig1419.3.1 vs. uniprot
Match: A0A1V5HPK4_9BACT (Arsenical pump membrane protein n=1 Tax=Tenericutes bacterium ADurb.BinA124 TaxID=1852921 RepID=A0A1V5HPK4_9BACT) HSP 1 Score: 64.3 bits (155), Expect = 1.870e-9 Identity = 46/127 (36.22%), Postives = 64/127 (50.39%), Query Frame = 1
Query: 10 RVPWAIAPFVFSMFVLVSALTAAGLTRAIADAAVVAGSECDGGGSFGSLVGTAAFFAASSALVVNVLNNLPATVLVVDALPVLCRAYNRRRFSAAVMGLLVGLNVGAYLTLVGALAGLMWAAIMRSH 390
R PW++ PFV SMF V L G+T +IA G ++G F +S L N++NN+P T+L D L + AAV +G N+GAYLT +GALAG+MW I++
Sbjct: 295 RTPWSLVPFVVSMFAFVLVLNRDGITTSIAGWL----------GKMNPIMG----FGLTSFLAANIINNIPMTILYTDILESVLPIAQTPALYAAV----IGSNIGAYLTPIGALAGIMWMQILKKQ 403 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1419.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1419.3.1 >prot_P-wetherbeei_contig1419.3.1 ID=prot_P-wetherbeei_contig1419.3.1|Name=mRNA_P-wetherbeei_contig1419.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp AFGRVPWAIAPFVFSMFVLVSALTAAGLTRAIADAAVVAGSECDGGGSFGback to top mRNA from alignment at P-wetherbeei_contig1419:6699..7211- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1419.3.1 ID=mRNA_P-wetherbeei_contig1419.3.1|Name=mRNA_P-wetherbeei_contig1419.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig1419:6699..7211- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1419:6699..7211- >mRNA_P-wetherbeei_contig1419.3.1 ID=mRNA_P-wetherbeei_contig1419.3.1|Name=mRNA_P-wetherbeei_contig1419.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig1419:6699..7211- (Phaeothamnion wetherbeei SAG_119_79)back to top |