mRNA_P-wetherbeei_contig1418.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1418.1.1
Unique NamemRNA_P-wetherbeei_contig1418.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1418.1.1 vs. uniprot
Match: D7FIA4_ECTSI (Protein phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIA4_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.030e-10
Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 1 
Query:    1 YQLGTNSTDTVEMADPFLFPAREGDVVVLATDGVLDNMFDDDIAACLKELSE 156
            YQLGT S D    A  FLF  REGD+VVLATDG+LDNMF+ DI  C++E  E
Sbjct:  216 YQLGTGSRDKAHDARDFLFYVREGDLVVLATDGLLDNMFESDILRCIEEAFE 267
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BLAST of mRNA_P-wetherbeei_contig1418.1.1 vs. uniprot
Match: A0A835Z8H6_9STRA (Protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H6_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 5.740e-9
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 1 
Query:    1 YQLGTNSTDTVEMADPFLFPAREGDVVVLATDGVLDNMFDDDIAACLKEL 150
            YQLGTNSTDT   A  F F  R GDV+VLATDG+ DN+FD+DI   +  L
Sbjct:  170 YQLGTNSTDTPADAVQFRFYTRPGDVIVLATDGLFDNLFDEDIVETVAAL 219
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BLAST of mRNA_P-wetherbeei_contig1418.1.1 vs. uniprot
Match: A0A6S9M3S8_HETAK (Protein phosphatase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M3S8_HETAK)

HSP 1 Score: 58.2 bits (139), Expect = 1.520e-8
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1 
Query:    1 YQLGTNSTDTVEMADPFLFPAREGDVVVLATDGVLDNMFDDDIAACLKE 147
            YQLGTN TD    A+ F F  R GDV+VLA+DGVLDN+F+ DI  C+ E
Sbjct:  236 YQLGTNCTDMPSDAELFEFAPRAGDVLVLASDGVLDNLFEQDIIDCVVE 284
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BLAST of mRNA_P-wetherbeei_contig1418.1.1 vs. uniprot
Match: M2X526_GALSU (Protein phosphatase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X526_GALSU)

HSP 1 Score: 53.9 bits (128), Expect = 4.560e-7
Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 1 
Query:    1 YQLGTNSTDTVEMADPFLFPAREGDVVVLATDGVLDNMFDDDIAACLKE 147
            YQLGT+S D V+M      P R GD++VL TDG+ DN+FD DI   +++
Sbjct:  199 YQLGTDSNDAVDMGQKIDIPLRVGDILVLGTDGLFDNLFDKDIKMAIEK 247
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BLAST of mRNA_P-wetherbeei_contig1418.1.1 vs. uniprot
Match: A0A5J4YV82_PORPP (Protein phosphatase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YV82_PORPP)

HSP 1 Score: 53.1 bits (126), Expect = 8.880e-7
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 1 
Query:    1 YQLGTNSTDTVEMADPFLFPAREGDVVVLATDGVLDNMFDDDIAACLKELSE 156
            YQLG++S+D+V+M        R+GD V++ATDG+ DN+FDDDI + + E  +
Sbjct:  206 YQLGSDSSDSVQMGQNVNQRVRKGDWVIVATDGLFDNVFDDDIVSIVSEFGD 257
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BLAST of mRNA_P-wetherbeei_contig1418.1.1 vs. uniprot
Match: A0A7S0JMB2_CAFRO (Protein phosphatase (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JMB2_CAFRO)

HSP 1 Score: 51.6 bits (122), Expect = 2.760e-6
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 1 
Query:    4 QLGTNSTDTVEMADPFLFPAREGDVVVLATDGVLDNMFDDDIAACL 141
            QLGT S D   MAD      R GD+VVL TDG+LDN+F+ D+A+ L
Sbjct:  207 QLGTGSADEPSMADQKELEVRPGDIVVLGTDGLLDNLFEGDVASAL 252
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BLAST of mRNA_P-wetherbeei_contig1418.1.1 vs. uniprot
Match: A0A1Y2GLM9_9FUNG (Protein phosphatase n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GLM9_9FUNG)

HSP 1 Score: 51.6 bits (122), Expect = 2.990e-6
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 1 
Query:    1 YQLGTNSTDTVEMADPFLFPAREGDVVVLATDGVLDNMFDDDI 129
            YQLGT STD+   A  F      GD+VV+ TDG+ DN+FD+DI
Sbjct:  180 YQLGTGSTDSPRDAQMFTVKVESGDIVVMGTDGIFDNLFDEDI 222
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BLAST of mRNA_P-wetherbeei_contig1418.1.1 vs. uniprot
Match: A0A8H7RW81_9FUNG (Protein phosphatase n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7RW81_9FUNG)

HSP 1 Score: 51.6 bits (122), Expect = 3.150e-6
Identity = 26/56 (46.43%), Postives = 34/56 (60.71%), Query Frame = 1 
Query:    1 YQLGTNSTDTVEMADPFLFPAREGDVVVLATDGVLDNMFDDDIAA----CLKELSE 156
            YQLGT S D    A  F     EGD+++LATDG+ DN+FDD+I      C+KE  +
Sbjct:  203 YQLGTASFDYPSDAQQFSIKIEEGDIIILATDGLFDNLFDDEILEEVQNCIKEYEQ 258
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BLAST of mRNA_P-wetherbeei_contig1418.1.1 vs. uniprot
Match: A0A8H7ZYE8_9FUNG (Protein phosphatase n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H7ZYE8_9FUNG)

HSP 1 Score: 51.6 bits (122), Expect = 3.190e-6
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 1 
Query:    1 YQLGTNSTDTVEMADPFLFPAREGDVVVLATDGVLDNMFDDDI 129
            YQLGT S D  E A  F    ++GDVVV+ TDG+ DN+FD+DI
Sbjct:  513 YQLGTGSRDAPEDAQGFTVKIQKGDVVVMGTDGIFDNLFDEDI 555
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BLAST of mRNA_P-wetherbeei_contig1418.1.1 vs. uniprot
Match: A0A197KG45_9FUNG (Protein phosphatase n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KG45_9FUNG)

HSP 1 Score: 51.2 bits (121), Expect = 4.320e-6
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 1 
Query:    1 YQLGTNSTDTVEMADPFLFPAREGDVVVLATDGVLDNMFDDDI 129
            YQLGT STD+   A  F      GD+VV+ TDG+ DN+FD+DI
Sbjct:  111 YQLGTGSTDSPTDAQVFTVKVESGDIVVMGTDGIFDNLFDEDI 153
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1418.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIA4_ECTSI1.030e-1061.54Protein phosphatase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z8H6_9STRA5.740e-960.00Protein phosphatase n=1 Tax=Tribonema minus TaxID=... [more]
A0A6S9M3S8_HETAK1.520e-859.18Protein phosphatase n=1 Tax=Heterosigma akashiwo T... [more]
M2X526_GALSU4.560e-748.98Protein phosphatase n=1 Tax=Galdieria sulphuraria ... [more]
A0A5J4YV82_PORPP8.880e-746.15Protein phosphatase n=1 Tax=Porphyridium purpureum... [more]
A0A7S0JMB2_CAFRO2.760e-654.35Protein phosphatase (Fragment) n=1 Tax=Cafeteria r... [more]
A0A1Y2GLM9_9FUNG2.990e-653.49Protein phosphatase n=1 Tax=Lobosporangium transve... [more]
A0A8H7RW81_9FUNG3.150e-646.43Protein phosphatase n=1 Tax=Mucor circinatus TaxID... [more]
A0A8H7ZYE8_9FUNG3.190e-655.81Protein phosphatase n=1 Tax=Olpidium bornovanus Ta... [more]
A0A197KG45_9FUNG4.320e-653.49Protein phosphatase n=1 Tax=Linnemannia elongata A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1418contigP-wetherbeei_contig1418:228..747 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FIA4
PFAMsPP2C_2,SpoIIE
Model size156
Max annot lvl2759|Eukaryota
KEGG koko:K12815,ko:K14773,ko:K17508
KEGG Pathwayko03040,map03040
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009657,GO:0009668,GO:0009987,GO:0010027,GO:0016043,GO:0016311,GO:0019538,GO:0035970,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0061024,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0104004,GO:1901564
Exons2
Evalue1.68e-11
EggNOG OGsCOG0631@1|root,KOG1379@2759|Eukaryota
EC3.1.3.16,3.6.4.13
Descriptionphosphoprotein phosphatase activity
Cds size156
COG categoryT
BRITEko00000,ko00001,ko01000,ko01009,ko03009,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186011.8133519-CDS-P-wetherbeei_contig1418:227..2921683186011.8133519-CDS-P-wetherbeei_contig1418:227..292Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1418 228..292 +
1683186011.8236606-CDS-P-wetherbeei_contig1418:656..7471683186011.8236606-CDS-P-wetherbeei_contig1418:656..747Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1418 657..747 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1418.1.1prot_P-wetherbeei_contig1418.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1418 228..747 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1418.1.1

>prot_P-wetherbeei_contig1418.1.1 ID=prot_P-wetherbeei_contig1418.1.1|Name=mRNA_P-wetherbeei_contig1418.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=52bp
YQLGTNSTDTVEMADPFLFPAREGDVVVLATDGVLDNMFDDDIAACLKEL
SE
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mRNA from alignment at P-wetherbeei_contig1418:228..747+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1418.1.1 ID=mRNA_P-wetherbeei_contig1418.1.1|Name=mRNA_P-wetherbeei_contig1418.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=520bp|location=Sequence derived from alignment at P-wetherbeei_contig1418:228..747+ (Phaeothamnion wetherbeei SAG_119_79)
TACCAATTAGGAACAAACAGCACAGACACTGTGGAAATGGCCGACCCATT
TCTCTTCCCTGCGAGGTGAGGCAAAGGAGAACGGAGGCATTCGCTGATTG
AGTTGGAGCGGATAAGCGGACCACCCTCTTTCTTCTATTCGCTCGTGGTT
GCTCTTAAGAATGCTGCTCTCCTGTCCTCCGTCTTCTTGTTAGCTCTCCT
TTTCAGGCTGCGGCAGTCCTTTTCGTGCTTACTTCCCCCTTGGTATTGTT
GGGCCTGAGGTACCTTCCTCCAGAAATGACTGCCGCGGAATGTCTCTTAC
AACCAGGGAATCGGCCGTCCTGACATGCCGCCATTCGCTGCCGTCGCTAC
ATCCCACCCCCCTTTGTACATCTTCTATTTTCTTTTACCGTATTCCATAA
ATGCCTAAATGTCAACTTTCTTCTAACAGAGAGGGGGACGTGGTGGTGCT
GGCGACGGACGGCGTGCTCGACAACATGTTCGACGACGATATCGCCGCCT
GCCTCAAGGAACTTTCCGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1418:228..747+

>mRNA_P-wetherbeei_contig1418.1.1 ID=mRNA_P-wetherbeei_contig1418.1.1|Name=mRNA_P-wetherbeei_contig1418.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=156bp|location=Sequence derived from alignment at P-wetherbeei_contig1418:228..747+ (Phaeothamnion wetherbeei SAG_119_79)
TACCAATTAGGAACAAACAGCACAGACACTGTGGAAATGGCCGACCCATT
TCTCTTCCCTGCGAGAGAGGGGGACGTGGTGGTGCTGGCGACGGACGGCG
TGCTCGACAACATGTTCGACGACGATATCGCCGCCTGCCTCAAGGAACTT
TCCGAG
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