mRNA_P-wetherbeei_contig14161.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14161.1.1
Unique NamemRNA_P-wetherbeei_contig14161.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14161.1.1 vs. uniprot
Match: A0A835ZCR5_9STRA (LMBR1-like membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCR5_9STRA)

HSP 1 Score: 323 bits (827), Expect = 1.730e-102
Identity = 173/385 (44.94%), Postives = 245/385 (63.64%), Query Frame = 1
Query:    1 WVVIYWSTFVLAWLVLPVLSSAWAEGEFTWGRRLKSAIRTNLITYVLMAIIGAGCVAFLMFKKHMDETSLSGFLMAWSNTYGLLLIILLMGHGLVEVPRRLWRSSFPQKELSLMLFRVTKVDTELYDAICLLEDAEHDVDRLDSLLGEREFRGEPAQREKLLANLAV--LMATRDAFPVDVHGIKR-GRSGSGGDRTAISATRK---------DMVKLHSRLRAAQEKTAAGRQRWEKLLPRVEVLDQVVSRTLPWPERARSDPDAGRCACAAVAAQLVLGRLRWVWRMHLAWWFHRLAFLACLFMSSLVLWCELTLGISSKRQLSPFGLVLEDLDGSHGTAHPILLQGLALVPFIYMSVCCYRSLFQLRLFGDNALQGPHQSLP 1119
            W  +YWSTFVLAWLV+P++++AWA GE TW +R+K+AIR N++TY+ MA+ G   V +L+ +    + +LSGFLMAW NTYGL+LI+LLMGHGLVEVPR+LW +SFP+++L L+ FR T++DT LYDAI  LEDAE + +++      R   G+   RE+   +L +  + ATRD F +   G  R  R  +    + + A +          ++V LHSRLR  QEK  AGRQRWE L+ +V +L+ +VS+ LP P+   +   +      A   QL   R  W WR+HL     RL  + C  +S++V+W E+ L  ++   LSPFG +++  +G      P+L+Q  AL+PF+YMS+CCYRSLF+LRL    AL GPHQSLP
Sbjct:   44 WYTVYWSTFVLAWLVMPIMNAAWAAGELTWRKRIKAAIRANVLTYIAMAVGGIAAVGYLLVRGIATKDTLSGFLMAWGNTYGLMLIVLLMGHGLVEVPRQLWITSFPERQLQLLYFRATQIDTSLYDAIYDLEDAEKEFEKIQR--AHRSGGGDAMTREQAKMSLYIEAIQATRDKFDLSAAGNGRTARPAANNIDSPLPAKKAKKKQLTPVGELVSLHSRLRNGQEKVVAGRQRWEDLMNQVALLELIVSKQLPRPQSVTAGRGSNPLKRFATFVQLKSARALWFWRLHLEHRVLRLTAVLCFVLSAMVIWSEVAL--AAPVDLSPFGKIIQSFEGKS----PLLIQAAALIPFLYMSLCCYRSLFKLRLLSSLALNGPHQSLP 420          
BLAST of mRNA_P-wetherbeei_contig14161.1.1 vs. uniprot
Match: A0A6H5JP79_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP79_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 5.160e-71
Identity = 144/393 (36.64%), Postives = 217/393 (55.22%), Query Frame = 1
Query:    1 WVVIYWSTFVLAWLVLPVLSSAWAEGEFTWGRRLKSAIRTNLITYVLMAIIGAGCVAFLMFKKHMDETSLSGFLMAWSNTYGLLLIILLMGHGLVEVPRRLWRSSFPQKELSLMLFRVTKVDTELYDAICLLEDAEHDVDRLDSLLGEREFRGEPAQREKLLANLAVLMATRDAFPVDVHGIK------RGRSGS---GGDRTAISATR---------KDMVKLHSRLRAAQEKTAAGRQRWEKLLPRVEVLDQVVSRTLPWPERA-RSDPDAGRCACAAVAAQLVLGRLRWVWRMHLAWWFHRLAFLACLFMSSLVLWCELTLGISSKRQLSPFGLVLEDL-DGSHGTAHPILLQGLALVPFIYMSVCCYRSLFQLRLFGDNALQGPHQSLP 1119
            W  +YW+TF+LAW++LP+L  AW  GE TW  R++ A+R N+  Y+ MA++    V +L+        S+SGFLMA +NTYGLL IILL+G GL++VPR+LW +SF + EL  + F  T+VDT+ +D++  LE  E ++D ++  +  ++       R  +   L+   AT +AF ++           RG++GS      RT   A +         +D  +LHS LRAAQ    A R +W  LL   + L  +V+  +PW +    + P+   C       +    R  WVWR +L     +   L C  +S ++LW E+    +S+  LSPFG++L  +     G  H + +Q   LVPF+YMS+CCYRSLF LR+FG  +LQG H +LP
Sbjct:   82 WYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVVYLVVSGQTSAGSVSGFLMALANTYGLLFIILLLGQGLIQVPRQLWETSFNETELQRLYFNATQVDTDKHDSLFELETLERNLDSMERAMDIKKHWC-IKDRAHMKNMLSSARATDEAFHLETDDGSFQTTRFRGKNGSKRWDDGRTPEDALKDLGVSRLSPRDAARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETTPEESVCHFLRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSEVM--AASRWNLSPFGILLRLMYQQEAGIGHALSMQAAVLVPFLYMSLCCYRSLFTLRIFGTFSLQGGHHTLP 471          
BLAST of mRNA_P-wetherbeei_contig14161.1.1 vs. uniprot
Match: A0A835Z6T2_9STRA (LMBR1-like membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T2_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.450e-58
Identity = 139/382 (36.39%), Postives = 197/382 (51.57%), Query Frame = 1
Query:    1 WVVIYWSTFVLAWLVLPVLSSAWAEGEFTWGRRLKSAIRTNLITYVLMAIIGAGCVAFLMFKKHMDETSLSGFLMAWSNTYGLLLIILLMGHG--------LVEVPRRLWRSSFPQK-ELSLMLFRVTKVDTELYDAICLLEDAEHDVDRLDSLLGEREFRGEPAQREKLLANLAVLMATRDAFPVDVHGIKRGRSGSGGDRTAISATRKDMVKLHSRLRAAQEKTAAGRQRWEKLLPRVEVLDQVVSRTLPWPERARSDPDAGRCACAAVAAQLVLGRLRWVWRMHLAWWFHRLAFLACLFMSSLVLWCELTLGISSKRQLSPFGLVLEDLDGSHGTAHPILLQGLALVPFIYMSVCCYRSLFQLRLFGDNALQGPHQSLP 1119
            W  +YWSTFVLAW+V+P+L+SAW  GE TW  R+++AI+ N++TY  MA  G     +L++K      +   F MAW NTYGL+LI+LLMGHG        LV  P        P K  +++ + R  +   E  D+            +L ++ G+R                    +     P    G K+ +    G R  +S    +++KLHSRLR  QE+  A  QRW+ L+ +V  ++Q++SRTLP P+      +  R   + VA          VW ++    F RL  + CL +S +V+W E TL +     LSPFG ++E LD     A    +Q   LVPFIYMS C +RSLF+L+LFG  AL GPHQSLP
Sbjct:  150 WSTVYWSTFVLAWVVMPILNSAWHAGELTWRARIRAAIKINMLTYAAMAAAGLVATGYLLYKGVATRDTAQAFFMAWGNTYGLMLIVLLMGHGDFERVRGGLVTTPVSPEADEAPAKASINVEVGRYLEAIQETIDSF-----------KLAAMGGDRR------------------RSASSCSPDSSKGPKKEKDR--GKRNHVS----ELIKLHSRLREGQERVMAAWQRWQDLVDKVTCVEQIISRTLPEPQPLPGASNYLRAQGSRVAR---------VWLLYAHHHFLRLLAVICLALSVMVVWSECTLAVP--YDLSPFGWLIEVLDPFGALA----VQAAVLVPFIYMSFCTFRSLFKLKLFGSFALNGPHQSLP 481          
BLAST of mRNA_P-wetherbeei_contig14161.1.1 vs. uniprot
Match: W7TPT9_9STRA (LMBR1-like membrane protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPT9_9STRA)

HSP 1 Score: 206 bits (524), Expect = 6.540e-57
Identity = 137/379 (36.15%), Postives = 207/379 (54.62%), Query Frame = 1
Query:    1 WVVIYWSTFVLAWLVLPVLSSAWAEGEFTWGRRLKSAIRTNLITYVLMAIIGAGCVAFLMFKKHMDETSLSGFLMAWSNTYGLLLIILLMGHGLVEVPRRLWRSSFPQKELSLMLFRVTKVDTELYDAICLLEDAEHDVDRLDSLLGEREFRGEPAQREKLLANLAVLMATRDAF---PVDVH-GIKRGRSGSGGDRTAISATRKDMVKL---HSRLRAAQEKTAAGRQRWEKLLPRVEVLDQVVSRTLPWPERARSDPDAGRCACAAVAAQLVLGRLRWVWRMHLAWWFHRLAFLACLFMSSLVLWCELTLGISSKRQLSPFGLVLEDLDGSHGTAHPILLQGLALVPFIYMSVCCYRSLFQLRLFGDNALQGPHQSL 1116
            W  IYWSTF+L WLVLP++ S    G FT   R+  A+R  L    +  +   G   +L+ +++       G LMA  NTYGLL +++L+G+GLVEVPR+LW+SSFP +EL  + FR + VD++L+DA+C+L D E +V  L   L +    GE    E L A + +L  TR +F   P D+  G+   R+  G +    S     +  L   H+RL+ AQ +    +++ + ++ +VEV++ V    LP+P   ++    G CA     A  +   L W W   L+    RL  +   F++   LW ++ LG  S   LSP+G   +    + GT+ P  +Q    VP  Y+S+C YRSLF+ +LFG+ +LQGPHQSL
Sbjct:  133 WKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLVAQRY-TLAGAEGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELALE-LDACMKILQDTRASFRHRPEDMTLGMLLPRTPFGVNSHPTSGPPPSLAHLAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEAVCQGALPYPSDVKAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLG--SPYALSPYGAFQQ----AFGTSSPFAIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSL 503          
BLAST of mRNA_P-wetherbeei_contig14161.1.1 vs. uniprot
Match: A0A7S4VB21_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VB21_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.880e-49
Identity = 130/389 (33.42%), Postives = 202/389 (51.93%), Query Frame = 1
Query:    1 WVVIYWSTFVLAWLVLPVLSSAWAEGEFTWGRRLKSAIRTNLITYVLMAIIGAGCVAFLMFKKHMDETSLSGFLMAWSNTYGLLLIILLMGHGLVEVPRRLWRSSFPQKELSLMLFRVTKVDTELYDAICLLEDAEHDVDRLDSLLGEREFRGEPAQR-------EKLLANLAVLMATRDAFPVDVHGIK---RGRSGSGGDRTAISA------TRKDMVKLHSRLRAAQEKTAAGRQRWEKLLPRVEVLDQVVSRTLPWPERARSDPDAGRCACAAVAAQLV-LG-RLRWVWRMHLAWWFHRLAFLACLFMSSLVLWCELTLGISSKRQLSPFGLVLEDLDGSHGTAHPILLQGLALVPFIYMSVCCYRSLFQLRLFGDNALQGPHQS 1113
            W V YWSTF+LAWLVLP+   +   GEFT   R+K+  R +    +++ ++    VA +    ++    +   LMA  NTYGLLL+ LL+G+GLV++P++LW+ +FP+ EL          D  L+DA+  L+D E   D +D  +   +  GE +         ++ + +L +L  +      D+   +   R R     D   +S       T   +V LH+RL+ AQEK    +QRWE ++ +      +V  + P     ++  +  + +   +  QLV LG +++ +WR HL    +RL  L+   +S L+LWCE TL +  +  LSPF L L+ LDG +G     L Q  AL+P +YMS C Y SLF+L  FG   L+G  QS
Sbjct:  108 WQVTYWSTFLLAWLVLPITRESLLSGEFTAAARVKNGARKSARGILILLVLAV--VAIIALGIYLRSLHVIPVLMALGNTYGLLLVSLLLGYGLVDLPKQLWKKTFPEDELRRARIMAVGADEALFDAVWELQDYE---DLIDGAVEAIDRCGELSSNLINEETYKQYVDDLVLLRNSTAELSPDLQSRRTNNRRRHSEAEDDDPVSTFDGARPTVDYLVHLHARLKLAQEKVIGAQQRWEVIVEQSRFYSNLVEGSTPQSSPGQNGGEDQQSSLPLMNEQLVPLGTKVQGMWRKHLRNPTYRLMALSTAGLSILILWCEATLAV--EYNLSPFNLFLDLLDGPNGRQKGTLFQIAALIPLLYMSTCVYSSLFKLGTFGPYCLRGNRQS 489          
BLAST of mRNA_P-wetherbeei_contig14161.1.1 vs. uniprot
Match: A0A7S1CL91_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CL91_9STRA)

HSP 1 Score: 167 bits (423), Expect = 2.340e-43
Identity = 111/373 (29.76%), Postives = 181/373 (48.53%), Query Frame = 1
Query:    1 WVVIYWSTFVLAWLVLPVLSSAWAEGEFTWGRRLKSAIRTNLITYVLMAIIGAGCVAFLMFKKHMDETSLSGFLMAWSNTYGLLLIILLMGHGLVEVPRRLWRSSFPQKELSLMLFRVTKVDTELYDAICLLEDAEHDVDRLDSLLGEREFRGEPAQREKLLANLAVLMATRDAFPVDVHGIKRGRSGSGGDRT--AISATRKDMVKLHSRLRAAQEKTAAGRQRWEKLLPRVEVLDQVVSRTLPWPERARSDPDAGRCACAAVAAQLVLGRLRWVWRMHLAWWFHRLAFLACLFMSSLVLWCELTLGISSKRQLSPFGLVLEDLDGSHGTAHPILLQGLALVPFIYMSVCCYRSLFQLRLFGDNALQGPHQS 1113
            W  +YW+TFVLAW+VLPVL   +  GE  W +RLK ++R+N+  Y++  I+    + ++   +      + GFL+  +NT+G++L + ++G+GLVEVPR  W  S P + + ++ F    +D++L+ A C ++D   D  RL               REKL     +    RD       G+        GD T  A +A  K++  LH RL A + +    + RW+ LL RV   + + + + P     R                    RL W W +  +   +++   AC F+S +V+WCEL + I +   LS +GL+++   G  G       Q L ++   YMS+C Y  LF+L+LF    + G  Q+
Sbjct:   73 WAFVYWTTFVLAWVVLPVLQEFYGSGELGWQKRLKYSLRSNIKFYLVSLILIVILIVWMAISQSWSFAHVGGFLIMCANTWGIILTVFMLGYGLVEVPRMFWAWSDPAEYIRVLQFSAPHLDSDLFTAKCDIDDIIADTRRL---------------REKLPHTGPL----RDFIESIHRGLPEDPGSGTGDVTIDAETAGEKELAALHRRLIAGRARLKRCQFRWDLLLRRVSEAEMIANNSSPVVHTTRE-------------------RLHWWWNLKASRVAYKVISAACAFLSGIVVWCELAVAIPTDANLSIYGLIVQGASGWFGK------QLLCVILLGYMSLCLYLPLFRLKLFDSLEMVGSRQT 401          
BLAST of mRNA_P-wetherbeei_contig14161.1.1 vs. uniprot
Match: A0A7S2WQ09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQ09_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.460e-42
Identity = 130/389 (33.42%), Postives = 193/389 (49.61%), Query Frame = 1
Query:    1 WVVIYWSTFVLAWLVLPVLSSAWAEGEFTWGRRLKSAIRTNLITYVLMAIIGAGCVAFLMFKKHMDETSLSGFLMAWSNTYGLLLIILLMGHGLVEVPRRLWRSSFPQKELSLMLFRVTKVDTELYDAICLLEDAEHDVDRLDSLLGEREFRGEPAQREKLLANLAVLMATRDAFPVDVHGIKR--GRSGSGGDRT-----AISATRKD--MVKLHSRLRAAQEKTAAGRQRWEKLLPRVEVLDQVVSRTLPWPER--ARSDPDAGRCACAAVAAQLVLGRLRWVWRMHLAWWFHRLAFLACLFMSSLVLWCELTLGISSKRQLSPFGLVLEDLDGSHGT---AHPILL--QGLALVPFIYMSVCCYRSLFQLRLFGDNALQGPHQSLP 1119
            W V+YWSTF LAWLVLPV+  AW  GE TW  R  +A+R NL   +   ++G   V +L+   ++    +  F M + NTYGLL+++ L+G+GLVEVPR LWR S P   L  +LF     DT++YD  C +ED   +     +   E   +G  A+  ++  +      T      + H I+R  GR  +  DR+     A   T +   M  LH R + A E   A + +          LD+  +  +    R  A  + D           Q+++G  R +          + A  A + +S++++W ELT G+     LSP+ L+L  +  S      + P++L  Q L LVP++YMS CC+ SLFQLRL G  +LQ PHQS P
Sbjct:  102 WSVVYWSTFCLAWLVLPVVYEAWYAGEPTWRGRFLAALRANLKYCIASTVLGFIFVLYLVATGNVTLEGIPSFFMLFGNTYGLLIVVALLGNGLVEVPRALWRQSTPSDRLERLLFCAAVCDTDVYDCKCDVEDILKEATIAGAASSETGVKGTAAEVIEICED------TLRELSQEYH-IRRSTGRHDTLEDRSEGHLLAEQETPQQGRMYALHRRAKMACESCRAAKMK----------LDRFFALAIEHESRMEASEESDTASRLPRPSKYQMLIGGSRVLAA--------KGACFAAIALSTMIVWSELTCGLPVN--LSPWSLLLGTIASSANDRPESQPLVLIHQLLVLVPYLYMSGCCFYSLFQLRLSGFLSLQSPHQSAP 463          
BLAST of mRNA_P-wetherbeei_contig14161.1.1 vs. uniprot
Match: A0A7S3HAN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAN0_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.850e-36
Identity = 118/403 (29.28%), Postives = 183/403 (45.41%), Query Frame = 1
Query:    1 WVVIYWSTFVLAWLVLPVLSSAWAEGEFTWGRRLKSAIRTNLITYVLMAIIGAGCVAFLMFKKHMDETSLSGFLMAWSNTYGLLLIILLMGHGLVEVPRRLWRSSFPQKELSLMLFRVTKVDTELYDAICLLEDAEHDVDRLDSLL---GEREFRGEPAQREKLLANLA--VLMATRDAFPVDVHGIKRGRSGSGGDRTAISATRKDMVKLHSRLRAAQEKTAAGRQRWEKLLPRVEVLDQVVSRTLPWPERARSDPDAGRCACAAVAAQLVLGRLR--------WVWR-----------MHLAW----WFH--RLAFLACLFMSSLVLWCELTLGISSKRQLSPFGLVLEDLDGSHGTAHPILLQGLALVPFIYMSVCCYRSLFQLRLFGDNALQGPHQSLP 1119
            W  +YWSTF+LAW VLP+       G F++  ++  ++   + + +L  + G   + +++       + + GF+MA  NTYG+LLI LLMG+GLV +P  LWR    ++ L  +       +    DA   LED E +++ +  LL   G    R E      +L N       A R      V G +  +        A+  T+K +VKLH+RL  AQ K  A  +RW  L+   E  +++         RA S P AG    +                    W WR           +++ W    + H  R A + C   S L+LW E+   + S +  SP GL++    G   T++ +L+QG++ V  +YMS+C Y  LF+L +     LQGP QS P
Sbjct:   74 WKFVYWSTFILAWAVLPIQMEYHGSGHFSFKEKMWDSLYNLVFSGILALLAGVIYIIYMVSTSGGTFSQVIGFVMAMGNTYGVLLITLLMGNGLVALPMHLWRLGDIERGLRELYLSAAYAEESFQDARYELEDCEAEIETIVGLLEKSGSATLRNEVGPFVDILTNKVSNFQFAKRSKSRAYVRGFQFDKVDD-----AVLTTKKHLVKLHARLMTAQLKARASERRWNVLIAESERQEEIAVM------RAGSGPSAGSATDSXXXXXXXXXNPSFLFTLCNPWTWRTPEFLRPYCEGLYVLWAQRLYVHSCRGAAIVCGAFSVLILWSEM---LMSSQLHSPIGLMMTAYPGQ--TSNSVLVQGVSFVALMYMSMCTYWPLFRLNIGWTYQLQGPQQSSP 460          
BLAST of mRNA_P-wetherbeei_contig14161.1.1 vs. uniprot
Match: A0A8K1CNL7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNL7_PYTOL)

HSP 1 Score: 148 bits (373), Expect = 5.590e-36
Identity = 128/392 (32.65%), Postives = 190/392 (48.47%), Query Frame = 1
Query:    1 WVVIYWSTFVLAWLVLPVLSSAWAEGEFTWGRRLKSAIRTNLITYVLMAIIGAGCVAFLMFKKHMDETSLSGFLMAWSNTYGLLLIILLMGHGLVEVPRRLWRSSFPQKELSLMLFRVTKVDTELYDAICLLEDAEHDV----DRLDSLLGEREFRGEPAQREKLLANLAVLMATRDAFPVDVHGIK-----------RGRSGSGGDRTAISA--TRKDMVKLHSRLRAAQEKTAAGRQRWEKLLPRVEVLDQVVSRTL-PWPERARSDPDAGRCACAAVAAQL--VLGRLRWVW-RMHLAWWFHRLAFLACLFMSSLVLWCELTLGISSKRQLSPFGLVLEDLDGSHGTAHPILLQGLALVPFIYMSVCCYRSLFQLRLFGDNALQGPHQS 1113
            W  +YW+TFVL+W +LP+L      GEF   RRL S++R  L  + ++  +G   + +L+F  H     L GF MA +NTYGL+ +I+L+G GLVE+PR LW   +P   L  + FR +++  E  +AI L ED   +     DR+  L  E       +  +    NL  ++    A   D   +K           R  + S   + AI+   T  ++V LH R++AAQ       Q W +L  + E L Q V  T        R+ P  G  + + V+ QL  +L  +  +  R+ L   +  ++ +A L   S +LW ELT+  SSK  L  F LV  +LD    T   +L  GL      Y+ +C Y SLF+LR FG  AL+G   S
Sbjct:   75 WQALYWTTFVLSWALLPLLVEFTQNGEFQLDRRLASSLRRLLFHWSVVVAVGTAVMLYLLFIGHFTAQGLLGFAMAAANTYGLVWLIVLLGFGLVEIPRSLWMKRYPAIRLRGLYFRASQIHNERMEAIFLYEDVVRETRASYDRM--LEAESASIVLTSDMQMTKTNLTHVLTLIQAEGRDGGAVKSKLYVATPSSPRKSTRSSSSQLAITTAPTPSEVVDLHRRVKAAQADLRGSEQAWVELCVQAEALAQQVKLTDGDGSGSERAAPPVGLFSTSDVSGQLRNMLDAVAHILQRVVLPPLYAFISLIAALGSLS-ILWSELTMSWSSKFSL--FHLVAPNLDDQAATTE-LLSFGL----LCYLVLCAYSSLFKLRSFGKFALRGHRNS 456          
BLAST of mRNA_P-wetherbeei_contig14161.1.1 vs. uniprot
Match: A0A7S3HAN8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAN8_9STRA)

HSP 1 Score: 149 bits (375), Expect = 7.210e-36
Identity = 118/403 (29.28%), Postives = 183/403 (45.41%), Query Frame = 1
Query:    1 WVVIYWSTFVLAWLVLPVLSSAWAEGEFTWGRRLKSAIRTNLITYVLMAIIGAGCVAFLMFKKHMDETSLSGFLMAWSNTYGLLLIILLMGHGLVEVPRRLWRSSFPQKELSLMLFRVTKVDTELYDAICLLEDAEHDVDRLDSLL---GEREFRGEPAQREKLLANLA--VLMATRDAFPVDVHGIKRGRSGSGGDRTAISATRKDMVKLHSRLRAAQEKTAAGRQRWEKLLPRVEVLDQVVSRTLPWPERARSDPDAGRCACAAVAAQLVLGRLR--------WVWR-----------MHLAW----WFH--RLAFLACLFMSSLVLWCELTLGISSKRQLSPFGLVLEDLDGSHGTAHPILLQGLALVPFIYMSVCCYRSLFQLRLFGDNALQGPHQSLP 1119
            W  +YWSTF+LAW VLP+       G F++  ++  ++   + + +L  + G   + +++       + + GF+MA  NTYG+LLI LLMG+GLV +P  LWR    ++ L  +       +    DA   LED E +++ +  LL   G    R E      +L N       A R      V G +  +        A+  T+K +VKLH+RL  AQ K  A  +RW  L+   E  +++         RA S P AG    +                    W WR           +++ W    + H  R A + C   S L+LW E+   + S +  SP GL++    G   T++ +L+QG++ V  +YMS+C Y  LF+L +     LQGP QS P
Sbjct:   74 WKFVYWSTFILAWAVLPIQMEYHGSGHFSFKEKMWDSLYNLVFSGILALLAGVIYIIYMVSTSGGTFSQVIGFVMAMGNTYGVLLITLLMGNGLVALPMHLWRLGDIERGLRELYLSAAYAEESFQDARYELEDCEAEIETIVGLLEKSGSATLRNEVGPFVDILTNKVSNFQFAKRSKSRAYVRGFQFDKVDD-----AVLTTKKHLVKLHARLMTAQLKARASERRWNVLIAESERQEEIAVM------RAGSGPSAGSATDSXXXXXXXXXNPSFLFTLCNPWTWRTPEFLRPYCEGLYVLWAQRLYVHSCRGAAIVCGAFSVLILWSEM---LMSSQLHSPIGLMMTAYPGQ--TSNSVLVQGVSFVALMYMSMCTYWPLFRLNIGWTYQLQGPQQSSP 460          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14161.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCR5_9STRA1.730e-10244.94LMBR1-like membrane protein n=1 Tax=Tribonema minu... [more]
A0A6H5JP79_9PHAE5.160e-7136.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z6T2_9STRA1.450e-5836.39LMBR1-like membrane protein-domain-containing prot... [more]
W7TPT9_9STRA6.540e-5736.15LMBR1-like membrane protein n=3 Tax=Monodopsidacea... [more]
A0A7S4VB21_9STRA2.880e-4933.42Hypothetical protein n=6 Tax=Ditylum brightwellii ... [more]
A0A7S1CL91_9STRA2.340e-4329.76Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2WQ09_9STRA1.460e-4233.42Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3HAN0_9STRA1.850e-3629.28Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A8K1CNL7_PYTOL5.590e-3632.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3HAN8_9STRA7.210e-3629.28Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14161contigP-wetherbeei_contig14161:32..1394 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FY43
Preferred nameLMBRD2
PFAMsLMBR1
Model size1119
Max annot lvl2759|Eukaryota
KEGG koko:K10393,ko:K16831
Hectar predicted targeting categorysignal peptide
GOsGO:0001726,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005884,GO:0005886,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0008150,GO:0009605,GO:0009987,GO:0015629,GO:0016020,GO:0016043,GO:0016192,GO:0016477,GO:0030030,GO:0031252,GO:0031268,GO:0031941,GO:0032991,GO:0040011,GO:0042221,GO:0042330,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051234,GO:0051674,GO:0071840,GO:0071944,GO:0098657,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:0120036
Exons2
Evalue9.51e-70
EggNOG OGsKOG2296@1|root,KOG2296@2759|Eukaryota
DescriptionLMBR1-like membrane protein
Cds size1119
COG categoryJ
BRITEko00000,ko03036,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186011.1453638-CDS-P-wetherbeei_contig14161:31..7901683186011.1453638-CDS-P-wetherbeei_contig14161:31..790Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14161 32..790 -
1683186011.154146-CDS-P-wetherbeei_contig14161:1034..13941683186011.154146-CDS-P-wetherbeei_contig14161:1034..1394Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14161 1035..1394 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14161.1.1prot_P-wetherbeei_contig14161.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14161 32..1394 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14161.1.1

>prot_P-wetherbeei_contig14161.1.1 ID=prot_P-wetherbeei_contig14161.1.1|Name=mRNA_P-wetherbeei_contig14161.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=373bp
WVVIYWSTFVLAWLVLPVLSSAWAEGEFTWGRRLKSAIRTNLITYVLMAI
IGAGCVAFLMFKKHMDETSLSGFLMAWSNTYGLLLIILLMGHGLVEVPRR
LWRSSFPQKELSLMLFRVTKVDTELYDAICLLEDAEHDVDRLDSLLGERE
FRGEPAQREKLLANLAVLMATRDAFPVDVHGIKRGRSGSGGDRTAISATR
KDMVKLHSRLRAAQEKTAAGRQRWEKLLPRVEVLDQVVSRTLPWPERARS
DPDAGRCACAAVAAQLVLGRLRWVWRMHLAWWFHRLAFLACLFMSSLVLW
CELTLGISSKRQLSPFGLVLEDLDGSHGTAHPILLQGLALVPFIYMSVCC
YRSLFQLRLFGDNALQGPHQSLP
back to top

mRNA from alignment at P-wetherbeei_contig14161:32..1394-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14161.1.1 ID=mRNA_P-wetherbeei_contig14161.1.1|Name=mRNA_P-wetherbeei_contig14161.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1363bp|location=Sequence derived from alignment at P-wetherbeei_contig14161:32..1394- (Phaeothamnion wetherbeei SAG_119_79)
TGGGTGGTAATCTACTGGTCCACCTTCGTCCTCGCGTGGCTCGTCCTGCC CGTGCTGAGCTCTGCGTGGGCCGAGGGCGAGTTCACGTGGGGCCGCCGCC TCAAGTCGGCCATCCGCACCAACCTCATTACCTACGTTCTGATGGCCATC ATCGGCGCCGGCTGCGTCGCCTTCCTGATGTTCAAGAAGCACATGGACGA GACGAGTCTGTCGGGGTTCCTGATGGCGTGGTCCAACACGTATGGCCTGC TGCTCATCATCCTGCTGATGGGCCACGGACTCGTCGAGGTGCCGCGGCGT CTCTGGCGGTCCAGCTTCCCGCAGAAGGAGCTCAGCCTTATGCTCTTCCG CGTCACTAAGGTACTGCTTAGGCAGGCGGCAGTTGCTTTTGTTTGCTGAG GGGAGGGGGAGCTTTGCAAGCGGCAACGCCGCTGTCATTCATGGGCTTCT GTTCTCCAGCCCCTTCTTCGCTTCTCTGCATTGCCTCCCTACTTTTCGCT TACCACCGCAATACCAGCTCTTCTCCAGCTCAATCTTTCTATCCGGACTA ACGCTCACCGCTGCTGTGCTTCTCCTCCTTTTCGTTAAACCCGACGTTCT AAAGGTGGACACGGAGCTGTACGACGCCATATGCCTGCTGGAGGATGCCG AGCACGACGTCGACCGCCTCGACTCGCTTCTCGGCGAGCGCGAGTTCCGC GGCGAGCCCGCCCAGCGCGAGAAGCTCCTCGCAAACCTCGCCGTGCTCAT GGCGACGCGAGATGCATTTCCCGTCGACGTCCATGGCATCAAGCGCGGCC GCAGCGGCAGCGGCGGCGACCGAACGGCCATCAGCGCGACGCGCAAGGAC ATGGTAAAGCTACACTCGCGGCTGCGGGCGGCGCAGGAGAAGACGGCAGC CGGCCGGCAGCGCTGGGAGAAGCTGCTGCCGCGCGTCGAGGTGCTGGACC AGGTCGTCAGCCGGACCTTGCCGTGGCCGGAGCGGGCTCGGTCGGACCCC GACGCCGGCCGCTGCGCGTGCGCGGCCGTGGCGGCGCAGCTGGTGCTTGG GCGGCTGCGGTGGGTGTGGCGGATGCATTTGGCATGGTGGTTCCACCGTC TGGCCTTCCTGGCCTGCCTGTTCATGAGCAGCCTCGTGCTGTGGTGCGAG CTGACGTTGGGTATCAGCTCCAAGCGGCAGCTGTCGCCGTTCGGACTCGT GTTGGAAGACTTGGATGGATCCCACGGGACGGCCCACCCCATCCTGCTGC AGGGGCTAGCGCTCGTGCCCTTCATCTATATGAGCGTCTGCTGTTACCGC AGCCTTTTCCAACTGCGGCTGTTTGGAGACAACGCGCTGCAGGGCCCGCA CCAGAGTCTGCCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig14161:32..1394-

>mRNA_P-wetherbeei_contig14161.1.1 ID=mRNA_P-wetherbeei_contig14161.1.1|Name=mRNA_P-wetherbeei_contig14161.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1119bp|location=Sequence derived from alignment at P-wetherbeei_contig14161:32..1394- (Phaeothamnion wetherbeei SAG_119_79)
TGGGTGGTAATCTACTGGTCCACCTTCGTCCTCGCGTGGCTCGTCCTGCC
CGTGCTGAGCTCTGCGTGGGCCGAGGGCGAGTTCACGTGGGGCCGCCGCC
TCAAGTCGGCCATCCGCACCAACCTCATTACCTACGTTCTGATGGCCATC
ATCGGCGCCGGCTGCGTCGCCTTCCTGATGTTCAAGAAGCACATGGACGA
GACGAGTCTGTCGGGGTTCCTGATGGCGTGGTCCAACACGTATGGCCTGC
TGCTCATCATCCTGCTGATGGGCCACGGACTCGTCGAGGTGCCGCGGCGT
CTCTGGCGGTCCAGCTTCCCGCAGAAGGAGCTCAGCCTTATGCTCTTCCG
CGTCACTAAGGTGGACACGGAGCTGTACGACGCCATATGCCTGCTGGAGG
ATGCCGAGCACGACGTCGACCGCCTCGACTCGCTTCTCGGCGAGCGCGAG
TTCCGCGGCGAGCCCGCCCAGCGCGAGAAGCTCCTCGCAAACCTCGCCGT
GCTCATGGCGACGCGAGATGCATTTCCCGTCGACGTCCATGGCATCAAGC
GCGGCCGCAGCGGCAGCGGCGGCGACCGAACGGCCATCAGCGCGACGCGC
AAGGACATGGTAAAGCTACACTCGCGGCTGCGGGCGGCGCAGGAGAAGAC
GGCAGCCGGCCGGCAGCGCTGGGAGAAGCTGCTGCCGCGCGTCGAGGTGC
TGGACCAGGTCGTCAGCCGGACCTTGCCGTGGCCGGAGCGGGCTCGGTCG
GACCCCGACGCCGGCCGCTGCGCGTGCGCGGCCGTGGCGGCGCAGCTGGT
GCTTGGGCGGCTGCGGTGGGTGTGGCGGATGCATTTGGCATGGTGGTTCC
ACCGTCTGGCCTTCCTGGCCTGCCTGTTCATGAGCAGCCTCGTGCTGTGG
TGCGAGCTGACGTTGGGTATCAGCTCCAAGCGGCAGCTGTCGCCGTTCGG
ACTCGTGTTGGAAGACTTGGATGGATCCCACGGGACGGCCCACCCCATCC
TGCTGCAGGGGCTAGCGCTCGTGCCCTTCATCTATATGAGCGTCTGCTGT
TACCGCAGCCTTTTCCAACTGCGGCTGTTTGGAGACAACGCGCTGCAGGG
CCCGCACCAGAGTCTGCCG
back to top