mRNA_P-wetherbeei_contig14158.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14158.1.1 vs. uniprot
Match: D7G8P7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8P7_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 9.650e-21 Identity = 66/209 (31.58%), Postives = 99/209 (47.37%), Query Frame = 2
Query: 29 EDDVLLMLLHAVDNLHQMRSELHLCLKQGFFNLTKARMAGFGKNNITVLDTREELPATFSIGVEPDEVTRLTQEAKRLAGQPLCPSGAETMETADAEPGSPRPLAVFRRRETRSASGNGNGTPAATPQTLRMRGAFADAASLMAEGPGFGSGSWALEDGGDAVKITDPLQLFGGLVPPPLRKAKKNFAGVLELTIAAANMAQRVFMLER 655
ED L LL A+D+LH +R+E+H CLKQGF N+ +AR + G+N+++VLDTREE A +I +E D QE++ + + + D R+R G G ++L L+ DA D + LF LVPPPLRK+KKNF V++ + A+N+A R+ L++
Sbjct: 3 EDAALSALLTALDDLHNIRNEMHTCLKQGFLNMARARRS-MGRNSVSVLDTREEYAAEVTIAIEEDTSEGRLQESRSMFSRNRVEPAGSAVVIRDGS---------LRQR-------GGGGAHVEIEESL-------------------------LQPDQDAPVRGDSMSLFATLVPPPLRKSKKNFTSVVDYAVEASNLAHRIIHLQK 169
BLAST of mRNA_P-wetherbeei_contig14158.1.1 vs. uniprot
Match: A0A835YMR8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR8_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.070e-17 Identity = 76/215 (35.35%), Postives = 96/215 (44.65%), Query Frame = 2
Query: 29 EDDVLLMLLHAVDNLHQMRSELHLCLKQGFFNLTKARMAGFG---KNNITVLDTREELPATFSIGV---EPDEVTRLTQEAKRLAGQPLCPSGAETMETADAEPGSPRPLAVFRRRETRSASGNGNGTPAATPQTLRMRGAFADAASLMAEGPGFGSGSWALEDGGDAVKITDPLQLFGGLVPPPLRKAKKNFAGVLELTIAAANMAQRVFMLER 655
E + L LL A D LH ++EL LCLKQGFFN+TKAR+A G ITVLDTREE A ++ + +PD A+ L L A D P S+ G+ NG+ +LR R G D +QLFGGLVPP LRKAK+NF+ L+ AA + QRV +L R
Sbjct: 22 ETSLTLALLEAADELHNAKAELSLCLKQGFFNMTKARLAAGGGAHSAGITVLDTREEFHAAVTVELLDKDPD-----ASPARELRALKLPAGHAFQRAGNDDAP--------------HSSGGSVNGS-----SSLRQR-----------NHAGSXXXXXXXXXXXXXAAGKDSMQLFGGLVPPALRKAKRNFSSALDYVFLAAELTQRVALLYR 201
BLAST of mRNA_P-wetherbeei_contig14158.1.1 vs. uniprot
Match: A0A7S2BYK8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BYK8_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.210e-11 Identity = 66/222 (29.73%), Postives = 102/222 (45.95%), Query Frame = 2
Query: 14 IEMASEDDVLLMLLHAVDNLHQMRSELHLCLKQGFFNLTKARMAGFGKNNITVLDTREELPATFSIGVEPDEVTRLTQEAKRLAGQPLCPSGAETMETADAEPGSPRPLAVFRRRETRSASGNGNGTPAATPQTLRMRGAFA-----DAASLMAEGPGFGSGSWALEDGGDAVKITDPLQLFGGLVPPPLRKAKKNFAGVLELTIAAANMAQRVFMLERRAR 664
+++ ED+ L+ L VD L+ + + +++GF N+TKAR + G+N ++ L+ RE + A + +E + E R RE+ A + NG +R RGA D ++ + P + A++ G A K T L LFGGLVPPP+RKAK +FA +E IAAAN+AQ + + ER R
Sbjct: 7 LQLTGEDEALVALFEKVDGLYAEQQRIAKSMRKGFLNITKARQS-MGRNALSALNCRELVDAQVRVDATHEEDAGMLWE---------------------------------RHRESPGAVASQNGA-------VRRRGAGGLSGPIDEDTVSSHTPDEPAADDAVQ--GAAQKNT--LMLFGGLVPPPMRKAKADFALAVEHCIAAANVAQSIALAEREIR 183
BLAST of mRNA_P-wetherbeei_contig14158.1.1 vs. uniprot
Match: A0A7S2S2U0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2U0_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.750e-10 Identity = 60/213 (28.17%), Postives = 104/213 (48.83%), Query Frame = 2
Query: 20 MASEDDVLLMLLHAVDNLHQMRSELHLCLKQGFFNLTKARMAGFGKNNITVLDTREELPATFSIGVEPDEVTRLTQEAKRLAGQPLCPSGAETMETADAEPGSPRPLAVFRRRETRSASGNGNGTPAATPQTLRMRGAFADAASLMAEGPGFGSGSWALEDGGDAVKITDPLQLFGGLVPPPLRKAKKNFAGVLELTIAAANMAQRVFMLERR 658
++ EDD LL LL ++ + + L++GF N+TKAR + G+ +T LD REE+ A+FS+ + +V+++ +++ + + FRR +RS + +TLR RG+ ++ + +++D +A + DP+ LFGGLVPP LR+A+ +F L+ I+AAN+ R L R
Sbjct: 11 LSPEDDALLGLLREACLYYEEQQKAAKALRRGFLNVTKARQS-MGRGALTALDCREEMVASFSL--DQSDVSQVDEQSALILWR------------------------RFRRVASRSGA-----------KTLRRRGSTPPSSDEPE--------NTSVDDREEARE--DPVLLFGGLVPPTLRRAQADFQVALDFYISAANVIHRAMQLRAR 175
BLAST of mRNA_P-wetherbeei_contig14158.1.1 vs. uniprot
Match: A0A7S2H454_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H454_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 2.990e-8 Identity = 56/218 (25.69%), Postives = 92/218 (42.20%), Query Frame = 2
Query: 17 EMASEDDVLLMLLHAVDNLHQMRSELHLCLKQGFFNLTKARMAGFGKNNITVLDTREELPATFSIGVEPD--EVTRLTQEAKRLAGQPLCPSGAETMETADAEPGSPRPLAVFRRRETRSASGNGNGTPAATPQTLRMRGAFADAASLMAEGPGFGSGSWALEDGGDAVKITDPLQLFGGLVPPPLRKAKKNFAGVLELTIAAANMAQRVFMLERRAR 664
E D LL +L D + + + +++GF N+ KAR + G+ ++T LD RE + A F+I D ++ R ++T+ + + RRR A GNG T + ++ ++EG A DP+ LFGGLVPPP+R+A + F +E + AAN+A ++ E+ R
Sbjct: 1 EPGDADSKLLSILSQTDEFYAEQQRIAKAIRKGFLNMAKARQS-LGRGSLTALDCRENVCAQFTIDAHTDCDDIWR---------------RHSDTLNAPEEK--------ALRRR---GAGGNGK-----TNEDIQS----------VSEG---------------AEDHNDPMLLFGGLVPPPMRRAGQEFTAAIEHIVTAANLAAKIIESEKELR 161
BLAST of mRNA_P-wetherbeei_contig14158.1.1 vs. uniprot
Match: A0A0D2M5V9_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2M5V9_9CHLO) HSP 1 Score: 57.0 bits (136), Expect = 1.060e-5 Identity = 61/201 (30.35%), Postives = 89/201 (44.28%), Query Frame = 2
Query: 53 LHAVDNLHQMRSELHLCLKQGFFNLTKARMAGFGKNNITVLDTREELPATFSIGV-EPDEVTRLTQ--EAKRLAGQPLCPSGAETM-ETADAEPGSPRPLAVFRRRETRSASGNGNGTPAATPQTLRMRGAFADAASLMAEGPGFGSGSWALEDGGDAVKITDPLQLFGGLVPPP-LRKAKKNFAGVLELTIAAANMAQRV 640
LHA+D+ ++L LK G+F+L +A+ AG ++ ++ A+ + V EP + L E +R A P S A ET+ R A R + +A+ +G PAA P G G GS A DPLQ FGG +PP LR+A+++F G L +AAAN QR+
Sbjct: 25 LHAIDDYLAACTQLTAALKGGWFSLARAKYAGAPGASLGQAAYPGDMRASAVVSVVEPSDPDDLFDRFELQRAADGPSVSSDAGAAPETSGGGRDRGRDAAADRSNASEAAAADGQ-VPAAGPSAT-----------------GSGRGSKA---------AADPLQWFGGGLPPADLRQAQRDFQGALAAAVAAANQLQRL 198 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14158.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14158.1.1 >prot_P-wetherbeei_contig14158.1.1 ID=prot_P-wetherbeei_contig14158.1.1|Name=mRNA_P-wetherbeei_contig14158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp MASEDDVLLMLLHAVDNLHQMRSELHLCLKQGFFNLTKARMAGFGKNNITback to top mRNA from alignment at P-wetherbeei_contig14158:18..1506- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14158.1.1 ID=mRNA_P-wetherbeei_contig14158.1.1|Name=mRNA_P-wetherbeei_contig14158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1489bp|location=Sequence derived from alignment at P-wetherbeei_contig14158:18..1506- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14158:18..1506- >mRNA_P-wetherbeei_contig14158.1.1 ID=mRNA_P-wetherbeei_contig14158.1.1|Name=mRNA_P-wetherbeei_contig14158.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig14158:18..1506- (Phaeothamnion wetherbeei SAG_119_79)back to top |