mRNA_P-wetherbeei_contig14050.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14050.2.1 vs. uniprot
Match: E0XS38_9PROT (Uncharacterized protein (Fragment) n=1 Tax=uncultured alpha proteobacterium HF0070_14E07 TaxID=710804 RepID=E0XS38_9PROT) HSP 1 Score: 132 bits (331), Expect = 1.350e-36 Identity = 76/111 (68.47%), Postives = 83/111 (74.77%), Query Frame = 1
Query: 55 QVTGSVTSSWSRNINLVPIDYAFRPRLRGRLTLRRLALRRNPWAFGESVSHTLYRYSCQHSHFRYLQPASQLTFAGLRNAPLPLAVNCKPIPSAS--GLSPVTFSAQDRLT 381
Q++ VT++ RNINL+PIDY FRPRLRGRLTL L L RNPWA+GESVSHTL RYSCQHSHFRYLQ SQ TF GLRNAPLP K SAS GLSP T SAQ L+
Sbjct: 2 QLSIFVTTTRLRNINLIPIDYGFRPRLRGRLTLGGLTLPRNPWAYGESVSHTLCRYSCQHSHFRYLQHPSQDTFTGLRNAPLPCV---KDTSSASVYGLSPDTSSAQAGLS 109
BLAST of mRNA_P-wetherbeei_contig14050.2.1 vs. uniprot
Match: Q3BKI0_9PROT (Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=Q3BKI0_9PROT) HSP 1 Score: 131 bits (329), Expect = 3.770e-36 Identity = 69/89 (77.53%), Postives = 73/89 (82.02%), Query Frame = 1
Query: 1 LELFPGTPSLPFQSNKVRQVTGSVTSSWSRNINLVPIDYAFRPRLRGRLTLRRLALRRNPWAFGESVSHTLYRYSCQHSHFRYLQPASQ 267
LELFPG SL QS+K Q+T VTSS NIN+VPIDYAFRPRLRGRLTLR LALRRNPW FGESVSHTL RYSCQHSHFRYLQ S+
Sbjct: 62 LELFPGPSSLHPQSDKQVQLTKVVTSSRPTNINVVPIDYAFRPRLRGRLTLRGLALRRNPWTFGESVSHTLCRYSCQHSHFRYLQRPSR 150
BLAST of mRNA_P-wetherbeei_contig14050.2.1 vs. uniprot
Match: H6SID8_PARPM (Uncharacterized protein (Fragment) n=2 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SID8_PARPM) HSP 1 Score: 130 bits (327), Expect = 7.580e-36 Identity = 67/100 (67.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query: 7 LFPGTPSLPFQSNKVRQVTGSVTSSWSRNINLVPIDYAFRPRLRGRLTLRRLALRRNPWAFGESVSHTLYRYSCQHSHFRYLQPASQLTFAGLRNAPLPL 306
LFPG P P QS+K+RQ VT R INL+ I Y FRPRLR RLTLR L LRRNPWAFG SVSHT +RYSCQHSH YLQ +S+ TF G+RNAPLPL
Sbjct: 29 LFPGLPWRPDQSDKIRQRPEGVTLHELRTINLIAIAYGFRPRLRDRLTLRGLTLRRNPWAFGGSVSHTSFRYSCQHSHXXYLQQSSRTTFTGVRNAPLPL 128
BLAST of mRNA_P-wetherbeei_contig14050.2.1 vs. uniprot
Match: A0A0H3KX17_BURM1 (Uncharacterized protein n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) TaxID=395019 RepID=A0A0H3KX17_BURM1) HSP 1 Score: 127 bits (319), Expect = 5.330e-35 Identity = 75/124 (60.48%), Postives = 78/124 (62.90%), Query Frame = 2
Query: 95 LTWFPSTTPFGLALGAD*PCAD*LYAGTLGLSARVSLTLFIATHVSILTSDTSSQPRS*PSQAYGTLRYRLQ*TANPYLRRLA*APLHFPRRIA*PVSCYAFFK*WLLLSQHPGCQSNPTSFPT 466
+T FPS T F LALGAD P AD G LGL+AR T FIATHVSI TSDTSS PSQAYGTL Y A+ APLH PRR VS YAFFK WLLLSQ P C S PTSFPT
Sbjct: 1 MTCFPSATHFCLALGADSPYADERCVGNLGLTARGPFTPFIATHVSIRTSDTSSTLYKAPSQAYGTLSYHACKHASA-ASVYGLAPLHLPRRTTRSVSYYAFFKGWLLLSQPPDCFSLPTSFPT 123
BLAST of mRNA_P-wetherbeei_contig14050.2.1 vs. uniprot
Match: H6SIE3_PARPM (Uncharacterized protein n=1 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SIE3_PARPM) HSP 1 Score: 121 bits (303), Expect = 8.350e-33 Identity = 64/102 (62.75%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 28 LPFQSNKVRQVTGSVTSSWSRNINLVPIDYAFRPRLRGRLTLRRLALRRNPWAFGESVSHTLYRYSCQHSHFRYLQPASQLTFAGLRNAPLPL-AVNCKPIP 330
+P QS+K RQ VT R INL+ I Y FRPRLR RLTLR L LRRNPWAFG SVSHT +RYSCQHSH YLQ +S+ TF G+RNAPLPL + +P P
Sbjct: 1 MPGQSDKTRQRPEGVTLHELRTINLIAIAYGFRPRLRDRLTLRGLTLRRNPWAFGGSVSHTSFRYSCQHSHXXYLQQSSRTTFTGVRNAPLPLHLIRVEPTP 102
BLAST of mRNA_P-wetherbeei_contig14050.2.1 vs. uniprot
Match: A0A6A5L5E7_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L5E7_LUPAL) HSP 1 Score: 130 bits (326), Expect = 2.300e-32 Identity = 65/87 (74.71%), Postives = 68/87 (78.16%), Query Frame = 1
Query: 7 LFPGTPSLPFQSNKVRQVTGSVTSSWSRNINLVPIDYAFRPRLRGRLTLRRLALRRNPWAFGESVSHTLYRYSCQHSHFRYLQPASQ 267
LFPGTPS P QS+K+ + T SVT W NI VPIDYAFRPRLRGRLTLRRL LRRNPW FGESV HTL RYSCQHSHF YL SQ
Sbjct: 346 LFPGTPSPPEQSDKLERYTASVTFRWPGNIRPVPIDYAFRPRLRGRLTLRRLTLRRNPWTFGESVFHTLCRYSCQHSHFPYLHGPSQ 432
BLAST of mRNA_P-wetherbeei_contig14050.2.1 vs. uniprot
Match: A0A6A5L269_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L269_LUPAL) HSP 1 Score: 130 bits (326), Expect = 3.210e-32 Identity = 65/87 (74.71%), Postives = 68/87 (78.16%), Query Frame = 1
Query: 7 LFPGTPSLPFQSNKVRQVTGSVTSSWSRNINLVPIDYAFRPRLRGRLTLRRLALRRNPWAFGESVSHTLYRYSCQHSHFRYLQPASQ 267
LFPGTPS P QS+K+ + T SVT W NI VPIDYAFRPRLRGRLTLRRL LRRNPW FGESV HTL RYSCQHSHF YL SQ
Sbjct: 397 LFPGTPSPPEQSDKLERYTASVTFRWPGNIRPVPIDYAFRPRLRGRLTLRRLTLRRNPWTFGESVFHTLCRYSCQHSHFPYLHGPSQ 483
BLAST of mRNA_P-wetherbeei_contig14050.2.1 vs. uniprot
Match: A0A6A5L1U4_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L1U4_LUPAL) HSP 1 Score: 130 bits (326), Expect = 4.570e-32 Identity = 65/87 (74.71%), Postives = 68/87 (78.16%), Query Frame = 1
Query: 7 LFPGTPSLPFQSNKVRQVTGSVTSSWSRNINLVPIDYAFRPRLRGRLTLRRLALRRNPWAFGESVSHTLYRYSCQHSHFRYLQPASQ 267
LFPGTPS P QS+K+ + T SVT W NI VPIDYAFRPRLRGRLTLRRL LRRNPW FGESV HTL RYSCQHSHF YL SQ
Sbjct: 355 LFPGTPSPPEQSDKLERYTASVTFRWPGNIRPVPIDYAFRPRLRGRLTLRRLTLRRNPWTFGESVFHTLCRYSCQHSHFPYLHGPSQ 441
BLAST of mRNA_P-wetherbeei_contig14050.2.1 vs. uniprot
Match: A0A2P2K9Q4_RHIMU (Uncharacterized protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2K9Q4_RHIMU) HSP 1 Score: 117 bits (293), Expect = 1.440e-31 Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 1
Query: 7 LFPGTPSLPFQSNKVRQVTGSVTSSWSRNINLVPIDYAFRPRLRGRLTLRRLALRRNPWAFGESVSHTLYRYSCQHSHF 243
LFPGT S P QS KV Q TG VT W +NI+ +PIDYAFRPRLRGRLTLRRL LRRNPW FG++V H++ RYSCQHSHF
Sbjct: 4 LFPGTHSRPDQSIKVGQHTGFVTIHWLQNIHCIPIDYAFRPRLRGRLTLRRLTLRRNPWTFGDTVFHSVCRYSCQHSHF 82
BLAST of mRNA_P-wetherbeei_contig14050.2.1 vs. uniprot
Match: E7C670_9ACTN (Uncharacterized protein n=1 Tax=uncultured actinobacterium HF0500_35G12 TaxID=723604 RepID=E7C670_9ACTN) HSP 1 Score: 111 bits (278), Expect = 6.490e-28 Identity = 76/155 (49.03%), Postives = 95/155 (61.29%), Query Frame = 1
Query: 13 PGTPSLPFQSNKVRQVTGSVTSSWSRNINLVPIDYAFRPRLRGRLTLRRLALRRNPWAFGESVSH-TLYRYSCQHSHFRYLQPASQLTFAGLRNAPLPLAVNCKPIPSASGLSPVTFSAQDRLTSELLRFL*MMAASKPTSWLSKQSHIVSHLAR 474
P P++P + VR+ + ++ W RNIN + IDYA RPRL RLTL L+L RNPW G VSH +L Y+ + R ++ + R+A P + SAS LSPVTFSA+D LTSELLR L M+AASKPTSWLS QSH V HL R
Sbjct: 43 PEGPAIPL-ATAVRRWSRNL---WYRNINRLCIDYASRPRLSSRLTLGGLSLPRNPWTSGGGVSHPSLATYTYILTRARSTTVSTGASLRTRRSATTP--AKQESATSASDLSPVTFSARDHLTSELLRTLSMVAASKPTSWLSGQSHFVFHLVR 191 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14050.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14050.2.1 >prot_P-wetherbeei_contig14050.2.1 ID=prot_P-wetherbeei_contig14050.2.1|Name=mRNA_P-wetherbeei_contig14050.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp LELFPGTPSLPFQSNKVRQVTGSVTSSWSRNINLVPIDYAFRPRLRGRLTback to top mRNA from alignment at P-wetherbeei_contig14050:349..822+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14050.2.1 ID=mRNA_P-wetherbeei_contig14050.2.1|Name=mRNA_P-wetherbeei_contig14050.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig14050:349..822+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14050:349..822+ >mRNA_P-wetherbeei_contig14050.2.1 ID=mRNA_P-wetherbeei_contig14050.2.1|Name=mRNA_P-wetherbeei_contig14050.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig14050:349..822+ (Phaeothamnion wetherbeei SAG_119_79)back to top |