prot_P-wetherbeei_contig13934.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13934.1.1
Unique Nameprot_P-wetherbeei_contig13934.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length109
Homology
BLAST of mRNA_P-wetherbeei_contig13934.1.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.250e-60
Identity = 96/109 (88.07%), Postives = 104/109 (95.41%), Query Frame = 0
Query:    1 GKGGRGGEKKKATTRSAKAGLQFPVGRIGRFLKQGRYSQRVGGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHVQLAVRNDEELNKLLGNVTIASGGVLPNI 109
            GKGGRG E KK+T++S+KAGLQFPV R+GRFLK GRY++RVG GAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRH+QLAVRNDEELNKLLGNVTIASGGVLPNI
Sbjct:    5 GKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNI 113          
BLAST of mRNA_P-wetherbeei_contig13934.1.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.020e-59
Identity = 96/109 (88.07%), Postives = 103/109 (94.50%), Query Frame = 0
Query:    1 GKGGRGGEKKKATTRSAKAGLQFPVGRIGRFLKQGRYSQRVGGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHVQLAVRNDEELNKLLGNVTIASGGVLPNI 109
            GKGGRG E KK T++SAKAGLQFPV R+GR+LKQGRY+ RVG GAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRH+QLAVRNDEELN+LLGNVTIASGGVLPNI
Sbjct:    5 GKGGRGAEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNI 113          
BLAST of mRNA_P-wetherbeei_contig13934.1.1 vs. uniprot
Match: A0A6G0X3A7_9STRA (Histone H2A n=29 Tax=Saprolegniaceae TaxID=4764 RepID=A0A6G0X3A7_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.420e-58
Identity = 94/107 (87.85%), Postives = 103/107 (96.26%), Query Frame = 0
Query:    3 GGRGGEKKKATTRSAKAGLQFPVGRIGRFLKQGRYSQRVGGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHVQLAVRNDEELNKLLGNVTIASGGVLPNI 109
            GGRG +K K ++RSAKAGLQFPVGR+ RFLK+GRY+QR+GGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRI+PRH+QLAVRNDEELNKLLGNVTIASGGVLPNI
Sbjct:    9 GGRG-KKGKTSSRSAKAGLQFPVGRVARFLKKGRYAQRIGGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNI 114          
BLAST of mRNA_P-wetherbeei_contig13934.1.1 vs. uniprot
Match: A0A2R5GVM3_9STRA (Histone H2A n=4 Tax=Labyrinthulomycetes TaxID=35131 RepID=A0A2R5GVM3_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.690e-57
Identity = 94/109 (86.24%), Postives = 102/109 (93.58%), Query Frame = 0
Query:    1 GKGGRGGEKKKATTRSAKAGLQFPVGRIGRFLKQGRYSQRVGGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHVQLAVRNDEELNKLLGNVTIASGGVLPNI 109
            GKGGRG +  KATTRSAKAGLQFPVGRI R+LK+G Y+ RVGGGAPVY+AAVLEYL AEILELAGNAARDNKK+RI+PRH+QLAVRNDEELNKLLGNVTIASGGVLPNI
Sbjct:    5 GKGGRGKKGGKATTRSAKAGLQFPVGRIARYLKKGGYATRVGGGAPVYMAAVLEYLAAEILELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNI 113          
BLAST of mRNA_P-wetherbeei_contig13934.1.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 181 bits (459), Expect = 4.120e-57
Identity = 94/109 (86.24%), Postives = 102/109 (93.58%), Query Frame = 0
Query:    1 GKGGRGGEKKKATTRSAKAGLQFPVGRIGRFLKQGRYSQRVGGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHVQLAVRNDEELNKLLGNVTIASGGVLPNI 109
            GKGGRGG  KK+TT SAKAGLQFPVGRIGR+L+QG+Y+ R+G GAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRH+ LAV+NDEELNKLLG VTIASGGVLPNI
Sbjct:    5 GKGGRGG--KKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNI 111          
BLAST of mRNA_P-wetherbeei_contig13934.1.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 4.120e-57
Identity = 93/109 (85.32%), Postives = 102/109 (93.58%), Query Frame = 0
Query:    1 GKGGRGGEKKKATTRSAKAGLQFPVGRIGRFLKQGRYSQRVGGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHVQLAVRNDEELNKLLGNVTIASGGVLPNI 109
            GKGGRG   KK+TTRSAKAGLQFPVGR+GRFLK+G+Y+ RVG GAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRH+QLAVRNDEELNKLLG VTIASGGVLPNI
Sbjct:    5 GKGGRG---KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNI 110          
BLAST of mRNA_P-wetherbeei_contig13934.1.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 181 bits (460), Expect = 5.160e-57
Identity = 91/109 (83.49%), Postives = 103/109 (94.50%), Query Frame = 0
Query:    1 GKGGRGGEKKKATTRSAKAGLQFPVGRIGRFLKQGRYSQRVGGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHVQLAVRNDEELNKLLGNVTIASGGVLPNI 109
            GKGGRG   KKA ++SAKAGLQFPVGR+GRFLKQGRY++RVG GAPVY+AAV+EYLCAE+LEL+GNAARDNKKSRI+PRH+QLAVRNDEELNKLLG VTIA+GGVLPNI
Sbjct:    7 GKGGRG--DKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNI 113          
BLAST of mRNA_P-wetherbeei_contig13934.1.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 5.320e-57
Identity = 93/109 (85.32%), Postives = 102/109 (93.58%), Query Frame = 0
Query:    1 GKGGRGGEKKKATTRSAKAGLQFPVGRIGRFLKQGRYSQRVGGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHVQLAVRNDEELNKLLGNVTIASGGVLPNI 109
            GKGGRG   KK T+RSAKAGLQFPVGRIGRF+KQG+YS RVGGGAPVY+AAVLEYL AE+LELAGNAARDNKK+RIVPRH+QLAVRNDEELN+LLG+ TIASGGVLPNI
Sbjct:    5 GKGGRG---KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNI 110          
BLAST of mRNA_P-wetherbeei_contig13934.1.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.680e-56
Identity = 93/109 (85.32%), Postives = 102/109 (93.58%), Query Frame = 0
Query:    1 GKGGRGGEKKKATTRSAKAGLQFPVGRIGRFLKQGRYSQRVGGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHVQLAVRNDEELNKLLGNVTIASGGVLPNI 109
            GKGGRG  +KK+TT SAKAGLQFPVGRIGR+L+QG+Y+ R+G GAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRH+ LAV+NDEELNKLLG VTIASGGVLPNI
Sbjct:    5 GKGGRG--EKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNI 111          
BLAST of mRNA_P-wetherbeei_contig13934.1.1 vs. uniprot
Match: A0A6V1P7M0_HETAK (Histone H2A n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7M0_HETAK)

HSP 1 Score: 180 bits (457), Expect = 1.790e-56
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0
Query:    1 GKGGRGGEKKKATTRSAKAGLQFPVGRIGRFLKQGRYSQRVGGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHVQLAVRNDEELNKLLGNVTIASGGVLPNI 109
            GK GRG   KK+ TRS+KAGLQFPVGRIGR+LKQGRYS RVG GAPVYLAAVLEYLCAEILELAGNAARDNKK+RIVPRH+QLAVRNDEELNKLLG VTIA GGVLPNI
Sbjct:   29 GKAGRG---KKSQTRSSKAGLQFPVGRIGRYLKQGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIVPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNI 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13934.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CG77_9STRA3.250e-6088.07Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835ZBB6_9STRA1.020e-5988.07Histone H2A n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A6G0X3A7_9STRA2.420e-5887.85Histone H2A n=29 Tax=Saprolegniaceae TaxID=4764 Re... [more]
A0A2R5GVM3_9STRA1.690e-5786.24Histone H2A n=4 Tax=Labyrinthulomycetes TaxID=3513... [more]
A0A6U2JFS4_9STRA4.120e-5786.24Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
D7FWI9_ECTSI4.120e-5785.32Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A835ZLE9_9STRA5.160e-5783.49Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
D8LLP0_ECTSI5.320e-5785.32Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A448ZH28_9STRA1.680e-5685.32Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A6V1P7M0_HETAK1.790e-5687.16Histone H2A n=2 Tax=Heterosigma akashiwo TaxID=282... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 69..83
score: 74.79
coord: 11..33
score: 70.19
coord: 40..55
score: 86.25
coord: 55..68
score: 87.07
coord: 97..109
score: 55.29
IPR002119Histone H2ASMARTSM00414h2a4coord: 1..109
e-value: 2.2E-66
score: 236.5
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 3..109
IPR002119Histone H2ACDDcd00074H2Acoord: 12..109
e-value: 7.02643E-66
score: 192.55
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 89..109
e-value: 2.6E-12
score: 46.3
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..109
e-value: 2.0E-57
score: 194.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..96
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 8..86
e-value: 2.0E-15
score: 57.3
NoneNo IPR availablePANTHERPTHR23430:SF238HISTONE H2Acoord: 3..109
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 19..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13934contigP-wetherbeei_contig13934:2..328 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13934.1.1mRNA_P-wetherbeei_contig13934.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13934 2..328 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13934.1.1 ID=prot_P-wetherbeei_contig13934.1.1|Name=mRNA_P-wetherbeei_contig13934.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=109bp
GKGGRGGEKKKATTRSAKAGLQFPVGRIGRFLKQGRYSQRVGGGAPVYLA
AVLEYLCAEILELAGNAARDNKKSRIVPRHVQLAVRNDEELNKLLGNVTI
ASGGVLPNI
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032458Histone_H2A_CS