mRNA_P-wetherbeei_contig10320.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10320.2.1 vs. uniprot
Match: A0A6H5L3S3_9PHAE (Fatty acid hydroxylase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3S3_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.010e-31 Identity = 55/110 (50.00%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 1 WYGHDIHSSHHAIPFYHVCIDPPELVIGWAICFVVPCLALLPQPLGMTAVSSYLTCGLLYEAAHYYAHIRVDINNGFLRAVKRHHMRHHLVDERRWLAFIAPIIDDIFGT 330 W GHD+H +HH PFYHVC+DPP+LV GW + LLP PL +T + Y++ GL+YE H+ H RV + + +KRHHM HHL D+ WLAF AP ID +FGT Sbjct: 200 WLGHDVHEAHHDKPFYHVCVDPPDLVAGWTLAAACVFKLLLPLPLAITVLVVYMSMGLVYEWVHFIVHTRVVPRSQLGKDLKRHHMLHHLKDDTCWLAFTAPPIDTLFGT 309
BLAST of mRNA_P-wetherbeei_contig10320.2.1 vs. uniprot
Match: A0A4D9D3N1_9STRA (Fatty acid hydroxylase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3N1_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.070e-28 Identity = 53/110 (48.18%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 1 WYGHDIHSSHHAIPFYHVCIDPPELVIGWAICFVVPCLALLPQPLGMTAVSSYLTCGLLYEAAHYYAHIRVDINNGFLRAVKRHHMRHHLVDERRWLAFIAPIIDDIFGT 330 W+G +IH+ HHA+PFYHV IDPP +V W + +PQPL T + +Y T GL YE AH+ H RV +A+K HH +HHLVDER W AF P+ID GT Sbjct: 108 WFGREIHAQHHALPFYHVSIDPPLIVGIWGAIACILGWVFVPQPLVWTVLGTYWTMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLVDERFWFAFSWPMIDASLGT 217
BLAST of mRNA_P-wetherbeei_contig10320.2.1 vs. uniprot
Match: W7TJ02_9STRA (Fatty acid hydroxylase-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ02_9STRA) HSP 1 Score: 109 bits (272), Expect = 3.290e-26 Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 1 WYGHDIHSSHHAIPFYHVCIDPPELVIGWAICFVVPCLALLPQPLGMTAVSSYLTCGLLYEAAHYYAHIRVDINNGFLRAVKRHHMRHHLVDERRWLAFIAPIIDDIFGT 330 W+G +IH+ HHA+PFYHV IDPP LV W + +P+PL T + +Y GL YE AH+ H RV +A+K HH +HHL+DER W AF P+ID GT Sbjct: 239 WFGREIHAQHHALPFYHVSIDPPLLVGVWGAIACILGWVFVPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGT 348
BLAST of mRNA_P-wetherbeei_contig10320.2.1 vs. uniprot
Match: K8Z8Q3_NANGC (Fatty acid hydroxylase-like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8Q3_NANGC) HSP 1 Score: 72.8 bits (177), Expect = 3.010e-14 Identity = 35/88 (39.77%), Postives = 47/88 (53.41%), Query Frame = 1 Query: 67 PELVIGWAICFVVPCLALLPQPLGMTAVSSYLTCGLLYEAAHYYAHIRVDINNGFLRAVKRHHMRHHLVDERRWLAFIAPIIDDIFGT 330 P ++GW +P+PL T + +Y GL YE AH+ H RV +A+K HH +HHL+DER W AF P+ID GT Sbjct: 13 PSCILGWVF---------VPRPLVWTVLGTYWIMGLFYEWAHFSVHTRVRPRTALGKAIKAHHTKHHLLDERFWFAFSWPMIDASLGT 91
BLAST of mRNA_P-wetherbeei_contig10320.2.1 vs. uniprot
Match: A0A1Z1FD67_9SPHN (Fatty acid hydroxylase n=2 Tax=Croceicoccus marinus TaxID=450378 RepID=A0A1Z1FD67_9SPHN) HSP 1 Score: 54.7 bits (130), Expect = 1.120e-6 Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = 1 Query: 16 IHSSHHAIPFYHVC-IDPPELVIGWAICFVVPCLALLPQPLGMTAVSSYLTCGLLYEAAHYYAHIRVDINNGFLRAVKRHHMRHHLVDERRWLAFIAPIIDDIFGT 330 IH SHH P + + PP + I A+C + ALL G A ++ ++Y+ H+ H ++ + +G RA+KRHHMRHH +DE A D +FG+ Sbjct: 93 IHGSHHLQPNDRLRNLMPPVVSIPVALC-IWGIFALLLGDAGTWAFLGFMLGYVMYDLTHFACH-QLPMRSGLARAIKRHHMRHHHIDENANYAVTFLFWDRVFGS 196
BLAST of mRNA_P-wetherbeei_contig10320.2.1 vs. uniprot
Match: UPI001FBAF767 (sterol desaturase family protein n=1 Tax=Sphingopyxis panaciterrae TaxID=363841 RepID=UPI001FBAF767) HSP 1 Score: 53.5 bits (127), Expect = 2.310e-6 Identity = 36/116 (31.03%), Postives = 53/116 (45.69%), Query Frame = 1 Query: 1 WYGHDIHSSHHAIP------FYHVCIDPPELVIGWAICFVVPCLALLPQPLGMTAVSSYLTCGLLYEAAHYYAHIRVDINNGFLRAVKRHHMRHHLVDERRWLAFIAPIIDDIFGT 330 W+ IH +HH P + + P + W+ C+A L QP G A ++ ++Y+ HY H R + A+KRHHMRHH +D+ A A D +FGT Sbjct: 64 WFVFLIHGNHHDNPGDGMRNMMPLSVSVPVAALVWS-----GCVACLGQP-GTWAFLGWIMGYVIYDGVHYACHQR-PMTGRIGAALKRHHMRHHYIDDTANYAISAIFWDRVFGT 172
BLAST of mRNA_P-wetherbeei_contig10320.2.1 vs. uniprot
Match: A0A538TCU8_9BACT (Fatty acid hydroxylase n=2 Tax=Candidatus Eisenbacteria bacterium TaxID=2212470 RepID=A0A538TCU8_9BACT) HSP 1 Score: 51.6 bits (122), Expect = 1.750e-5 Identity = 38/116 (32.76%), Postives = 55/116 (47.41%), Query Frame = 1 Query: 1 WYGHDIHSSHHAIPFYHV-CIDPPELVIGWAICFVVPCLALLPQPLGMTAVSS-----YLTCGLLYEAAHYYAHIRVDINNGFLRAVKRHHMRHHLVDERRWLAFIAPIIDDIFGT 330 WY IH HH P + PP L I A+ F V L + L + +S +LT L Y+ HY H + + GFL+ +KR+H+RHH + +P+ D +FGT Sbjct: 100 WYL--IHGVHHEQPQCKTRLVMPPILSIPLALFFYVVFLVTVGMILALPRLSGPSFAGFLTGYLAYDMLHYAEH-HLSMRWGFLKFLKRYHLRHHYKNPNHGFGVSSPVWDVVFGT 212
BLAST of mRNA_P-wetherbeei_contig10320.2.1 vs. uniprot
Match: A0A653IZM2_9SPHN (Fatty acid hydroxylase n=1 Tax=Novosphingobium sp. 9U TaxID=2653158 RepID=A0A653IZM2_9SPHN) HSP 1 Score: 51.2 bits (121), Expect = 2.310e-5 Identity = 37/110 (33.64%), Postives = 50/110 (45.45%), Query Frame = 1 Query: 19 HSSHHAIP------FYHVCIDPPELVIGWAICFVVPCLALLPQPLGMTAVSSYLTCGLLYEAAHYYAHIRVDINNGFLRAVKRHHMRHHLVDERRWLAFIAPIIDDIFGT 330 H +HH P + + P + WA LALL G ++T ++Y+ HY H R + GF +KRHHMRHH VDER A A D +FG+ Sbjct: 91 HGNHHVSPNDRMRNLMPLLVSLPVSALAWA-----TNLALLGSS-GTWLFLGWITGYVIYDLVHYACHQR-PMRGGFGAVLKRHHMRHHHVDERGNYAVSAIFWDRVFGS 193
BLAST of mRNA_P-wetherbeei_contig10320.2.1 vs. uniprot
Match: UPI001F304522 (sterol desaturase family protein n=1 Tax=unclassified Novosphingobium TaxID=2644732 RepID=UPI001F304522) HSP 1 Score: 50.1 bits (118), Expect = 3.890e-5 Identity = 25/67 (37.31%), Postives = 38/67 (56.72%), Query Frame = 1 Query: 130 PLGMTAVSSYLTCGLLYEAAHYYAHIRVDINNGFLRAVKRHHMRHHLVDERRWLAFIAPIIDDIFGT 330 P G + ++T +LY+A H+ H + + +A+KRHHMRHH VDE A A +D +FG+ Sbjct: 95 PAGTWMLLGFMTGYVLYDAVHFACH-QFPMRGRLGKALKRHHMRHHYVDEDSNFAITAIFLDRVFGS 160
BLAST of mRNA_P-wetherbeei_contig10320.2.1 vs. uniprot
Match: UPI001CA725DC (sterol desaturase family protein n=1 Tax=Sphingomonas colocasiae TaxID=1848973 RepID=UPI001CA725DC) HSP 1 Score: 50.1 bits (118), Expect = 5.930e-5 Identity = 36/116 (31.03%), Postives = 53/116 (45.69%), Query Frame = 1 Query: 1 WYGHDIHSSHHAIP------FYHVCIDPPELVIGWAICFVVPCLALLPQPLGMTAVSSYLTCGLLYEAAHYYAHIRVDINNGFLRAVKRHHMRHHLVDERRWLAFIAPIIDDIFGT 330 W+ IH +HH P + + P + W +C + LL P G ++T ++Y+A HY H + + A+KRHHMRHH VD+ A A D IFG+ Sbjct: 92 WFVFLIHGNHHDNPNDPMRDMMPLAVSIPVSALIWGLCIL-----LLGAP-GTWLFLGFITGYVIYDAIHYACH-QWPMRGRLGAALKRHHMRHHHVDDHGNYAISAIFWDYIFGS 200 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10320.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10320.2.1 >prot_P-wetherbeei_contig10320.2.1 ID=prot_P-wetherbeei_contig10320.2.1|Name=mRNA_P-wetherbeei_contig10320.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp WYGHDIHSSHHAIPFYHVCIDPPELVIGWAICFVVPCLALLPQPLGMTAVback to top mRNA from alignment at P-wetherbeei_contig10320:1834..2362- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10320.2.1 ID=mRNA_P-wetherbeei_contig10320.2.1|Name=mRNA_P-wetherbeei_contig10320.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=529bp|location=Sequence derived from alignment at P-wetherbeei_contig10320:1834..2362- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10320:1834..2362- >mRNA_P-wetherbeei_contig10320.2.1 ID=mRNA_P-wetherbeei_contig10320.2.1|Name=mRNA_P-wetherbeei_contig10320.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig10320:1834..2362- (Phaeothamnion wetherbeei SAG_119_79)back to top |