prot_P-wetherbeei_contig13912.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13912.2.1
Unique Nameprot_P-wetherbeei_contig13912.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length88
Homology
BLAST of mRNA_P-wetherbeei_contig13912.2.1 vs. uniprot
Match: A0A835YWD3_9STRA (Serine hydroxymethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD3_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.870e-31
Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 0
Query:    1 MGAPALTTRGFTEEDFVQVAKFFDRAVTIAQAVKKETGPKIKDFRAKLAAGADAVPELALLKTEVVAFSRQFPAIGFDENAMRYP 85
            MGAPALTTRGFTEEDFV+VA+FFDR V I+  +K++TG K+KD++A LA+GADA PELA LK +VVAFSR FPAIGFDE  MRYP
Sbjct:  415 MGAPALTTRGFTEEDFVKVAEFFDRGVKISMDIKEKTG-KLKDYKAFLASGADAHPELAKLKADVVAFSRGFPAIGFDETTMRYP 498          
BLAST of mRNA_P-wetherbeei_contig13912.2.1 vs. uniprot
Match: A0A7S3Y4I0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4I0_HETAK)

HSP 1 Score: 101 bits (252), Expect = 2.750e-25
Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 0
Query:    1 MGAPALTTRGFTEEDFVQVAKFFDRAVTIAQAVKKET-GPKIKDFRAKLAAGADAVPELALLKTEVVAFSRQFPAIGFDENAMRYP 85
            MGAP LTTRG TE+DF QVA FFD AV + + +K++  G K+KDF+  LAAG DA P +A L+  V+AF+R FP IGF+E+AMRYP
Sbjct:   94 MGAPTLTTRGLTEQDFEQVAVFFDEAVRVTKDIKEKLPGKKLKDFKDYLAAGPDADPAVADLRKRVIAFARGFPCIGFEESAMRYP 179          
BLAST of mRNA_P-wetherbeei_contig13912.2.1 vs. uniprot
Match: A0A7S2YX07_9CHLO (Serine hydroxymethyltransferase n=3 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2YX07_9CHLO)

HSP 1 Score: 102 bits (254), Expect = 1.500e-23
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 0
Query:    1 MGAPALTTRGFTEEDFVQVAKFFDRAVTIAQAVKKETGPKIKDFRAKLAAGADAVPELALLKTEVVAFSRQFPAIGFDENAMRYPA 86
            MG PALTTRGF EEDFV+VA F DR+V IAQ +K++TGPK+KDF+A L  G    P++A L+ +V  F+ QFP IGFD+  M+Y A
Sbjct:  440 MGTPALTTRGFVEEDFVKVADFVDRSVKIAQKLKEQTGPKLKDFKALLEDGNPLPPDVAELRADVEEFAMQFPTIGFDKADMKYKA 525          
BLAST of mRNA_P-wetherbeei_contig13912.2.1 vs. uniprot
Match: A0A2K1JHU1_PHYPA (Serine hydroxymethyltransferase n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JHU1_PHYPA)

HSP 1 Score: 99.4 bits (246), Expect = 1.890e-22
Identity = 48/84 (57.14%), Postives = 63/84 (75.00%), Query Frame = 0
Query:    1 MGAPALTTRGFTEEDFVQVAKFFDRAVTIAQAVKKETGPKIKDFRAKLAAGADAVPELALLKTEVVAFSRQFPAIGFDENAMRY 84
            MG PALT+RGF EEDF +VA+FFDRAV IA  VKK TG K+KDFRA +    +   E+  L+TEV  F++QFP IGF++++M+Y
Sbjct:  439 MGTPALTSRGFIEEDFEKVAEFFDRAVGIAVKVKKSTGAKLKDFRAAVDTDPEIQAEIGKLRTEVEEFAKQFPTIGFEKSSMKY 522          
BLAST of mRNA_P-wetherbeei_contig13912.2.1 vs. uniprot
Match: D8LUA3_ECTSI (Serine hydroxymethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUA3_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 4.410e-22
Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    1 MGAPALTTRGFTEEDFVQVAKFFDRAVTIAQAVKKETGPKIKDFRAKLAAGADAVPELALLKTEVVAFSRQFPAIGFDENAMRYPA 86
            MGAPALT+RGFTEEDF QVA FF R VT+A+ V  +TG KIK +R  LA G    PE+  L+ ++  F+R FP IGFD+  MRYPA
Sbjct:  406 MGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVAADTG-KIKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGFDQETMRYPA 490          
BLAST of mRNA_P-wetherbeei_contig13912.2.1 vs. uniprot
Match: A0A7S2FD08_9STRA (Glycine hydroxymethyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FD08_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 4.970e-22
Identity = 49/84 (58.33%), Postives = 62/84 (73.81%), Query Frame = 0
Query:    1 MGAPALTTRGFTEEDFVQVAKFFDRAVTIAQAVKKETGPKIKDFRAKLAAGADAVPELALLKTEVVAFSRQFPAIGFDENAMRY 84
            MGAPALT+RG  E+DFV+VAKFFDR V IA  VK  TG K+KDF+A L +  +A  EL  L+ EV  FS+QF  +GF+E++MRY
Sbjct:  166 MGAPALTSRGLVEKDFVEVAKFFDRGVNIALEVKGATGKKLKDFKAALPSS-EANAELKALENEVAHFSQQFMTVGFEEDSMRY 248          
BLAST of mRNA_P-wetherbeei_contig13912.2.1 vs. uniprot
Match: A0A7S3M9R5_9STRA (Serine hydroxymethyltransferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9R5_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.950e-22
Identity = 48/77 (62.34%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    1 MGAPALTTRGFTEEDFVQVAKFFDRAVTIAQAVKKETGPKIKDFRAKLAAGADAVPELALLKTEVVAFSRQFPAIGF 77
            MG PALT+RG TEEDF +VA FFDRAVTI + +  +TGPKIKDF+A LA GA+  PEL  L  EV  F+R FP +GF
Sbjct:  410 MGTPALTSRGLTEEDFEKVAHFFDRAVTITENINAKTGPKIKDFKAALANGAEGFPELQKLAEEVREFARSFPTVGF 486          
BLAST of mRNA_P-wetherbeei_contig13912.2.1 vs. uniprot
Match: A0A2K1L9Z2_PHYPA (Serine hydroxymethyltransferase n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L9Z2_PHYPA)

HSP 1 Score: 97.1 bits (240), Expect = 1.260e-21
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 0
Query:    1 MGAPALTTRGFTEEDFVQVAKFFDRAVTIAQAVKKETGPKIKDFRAKLAAGADAVPELALLKTEVVAFSRQFPAIGFDENAMRY 84
            MG PALT+RGFTEEDF +VA++FDRAV IA  VKK TG K+KDFR  +    +   E+  LK EV  F++QFP IGF++++M+Y
Sbjct:  438 MGTPALTSRGFTEEDFEKVAEYFDRAVEIAVKVKKSTGTKLKDFRNVVDTDPEVQAEIGKLKHEVEEFAKQFPTIGFEKSSMKY 521          
BLAST of mRNA_P-wetherbeei_contig13912.2.1 vs. uniprot
Match: A0A5J4XZN4_9CHLO (Serine hydroxymethyltransferase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XZN4_9CHLO)

HSP 1 Score: 95.5 bits (236), Expect = 4.560e-21
Identity = 49/84 (58.33%), Postives = 61/84 (72.62%), Query Frame = 0
Query:    1 MGAPALTTRGFTEEDFVQVAKFFDRAVTIAQAVKKETGPKIKDFRAKLAAGADAVPELALLKTEVVAFSRQFPAIGFDENAMRY 84
            MGAPALT+RGF E+DF QVA F DR V I Q +KK+ GPK+KDF+A L    +  PE+A LK  V  F++QFP IGF++ AMRY
Sbjct:  452 MGAPALTSRGFIEDDFRQVADFVDRGVQITQDLKKKHGPKLKDFKAYLET--NVPPEIAELKDNVETFAKQFPTIGFEKAAMRY 533          
BLAST of mRNA_P-wetherbeei_contig13912.2.1 vs. uniprot
Match: W7TN09_9STRA (Serine hydroxymethyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN09_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 5.660e-21
Identity = 47/77 (61.04%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    1 MGAPALTTRGFTEEDFVQVAKFFDRAVTIAQAVKKETGPKIKDFRAKLAAGADAVPELALLKTEVVAFSRQFPAIGF 77
            +G PALT+RGFTEEDF QV  FFDRAV IAQ +K+ETGPKIKDF+  L  G      L  LK +VVAF+++FP +GF
Sbjct:  417 IGCPALTSRGFTEEDFEQVGHFFDRAVKIAQEIKRETGPKIKDFKEALREGPGKHQALVDLKKDVVAFAQKFPTVGF 493          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13912.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWD3_9STRA4.870e-3172.94Serine hydroxymethyltransferase n=1 Tax=Tribonema ... [more]
A0A7S3Y4I0_HETAK2.750e-2559.30Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2YX07_9CHLO1.500e-2358.14Serine hydroxymethyltransferase n=3 Tax=Pycnococcu... [more]
A0A2K1JHU1_PHYPA1.890e-2257.14Serine hydroxymethyltransferase n=2 Tax=Physcomitr... [more]
D8LUA3_ECTSI4.410e-2258.14Serine hydroxymethyltransferase n=2 Tax=Ectocarpus... [more]
A0A7S2FD08_9STRA4.970e-2258.33Glycine hydroxymethyltransferase n=1 Tax=Dictyocha... [more]
A0A7S3M9R5_9STRA5.950e-2262.34Serine hydroxymethyltransferase n=1 Tax=Spumella e... [more]
A0A2K1L9Z2_PHYPA1.260e-2155.95Serine hydroxymethyltransferase n=2 Tax=Physcomitr... [more]
A0A5J4XZN4_9CHLO4.560e-2158.33Serine hydroxymethyltransferase n=1 Tax=Trebouxia ... [more]
W7TN09_9STRA5.660e-2161.04Serine hydroxymethyltransferase n=3 Tax=Monodopsid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015422Pyridoxal phosphate-dependent transferase, small domainGENE3D3.90.1150.10Aspartate Aminotransferase, domain 1coord: 1..80
e-value: 2.3E-18
score: 68.1
IPR001085Serine hydroxymethyltransferasePANTHERPTHR11680SERINE HYDROXYMETHYLTRANSFERASEcoord: 1..84
NoneNo IPR availablePANTHERPTHR11680:SF46SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIALcoord: 1..84
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13912contigP-wetherbeei_contig13912:952..1558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13912.2.1mRNA_P-wetherbeei_contig13912.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13912 931..1558 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13912.2.1 ID=prot_P-wetherbeei_contig13912.2.1|Name=mRNA_P-wetherbeei_contig13912.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=88bp
MGAPALTTRGFTEEDFVQVAKFFDRAVTIAQAVKKETGPKIKDFRAKLAA
GADAVPELALLKTEVVAFSRQFPAIGFDENAMRYPAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015422PyrdxlP-dep_Trfase_small
IPR001085Ser_HO-MeTrfase
IPR015424PyrdxlP-dep_Trfase