prot_P-wetherbeei_contig13894.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13894.1.1
Unique Nameprot_P-wetherbeei_contig13894.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length181
Homology
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BLAST of mRNA_P-wetherbeei_contig13894.1.1 vs. uniprot
Match: A0A486XW26_9GAMM (Membrane fusion protein n=1 Tax=Rheinheimera sp. BAL341 TaxID=1708203 RepID=A0A486XW26_9GAMM)

HSP 1 Score: 53.1 bits (126), Expect = 5.070e-5
Identity = 47/164 (28.66%), Postives = 73/164 (44.51%), Query Frame = 0 
Query:    2 VDRVLVVIGQRVNAGEVIAQSDSSEIDREIGALREQSDRVQKQLESVRVETQSFNILQDQELVSRTIVTGLEGRLADLESSARALMGRIQDAENRLFRAVVRAPVTGTVIAAPPQVEGRPFRPGEVIVKIQA-----DPDRIVLEGDLSPALVAALRASPEARV 160
            V  V+V IG R+ AGEV+A  D       +   R ++ + Q  LE  +   +  N L+    VS+  + G        E+S R    RI+ AE  L +AV+RAP  G V         R   P E + + Q        +R+++E  +  +L   LR++ E  V
Sbjct:   89 VQDVIVDIGSRLKAGEVMAALDLEPYQLALYNARSEASKAQATLEESQANYERLNSLRSNNAVSQQDLEGSRTLFLTAEASLREANSRIRIAERELSQAVIRAPYDGVVST-------RQVNPFEEVAQTQIIFTFDSTERLIVESSVPVSLATELRSTNEQTV 245
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13894.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A486XW26_9GAMM5.070e-528.66Membrane fusion protein n=1 Tax=Rheinheimera sp. B... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..96
NoneNo IPR availableCOILSCoilCoilcoord: 31..51
NoneNo IPR availableGENE3D2.40.50.100coord: 2..111
e-value: 2.5E-7
score: 32.6
NoneNo IPR availableGENE3D1.10.287.470Helix hairpin bincoord: 25..98
e-value: 2.5E-7
score: 32.6
NoneNo IPR availablePFAMPF13437HlyD_3coord: 101..161
e-value: 5.1E-5
score: 23.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13894contigP-wetherbeei_contig13894:231..773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13894.1.1mRNA_P-wetherbeei_contig13894.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13894 231..773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13894.1.1 ID=prot_P-wetherbeei_contig13894.1.1|Name=mRNA_P-wetherbeei_contig13894.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=181bp
AVDRVLVVIGQRVNAGEVIAQSDSSEIDREIGALREQSDRVQKQLESVRV
ETQSFNILQDQELVSRTIVTGLEGRLADLESSARALMGRIQDAENRLFRA
VVRAPVTGTVIAAPPQVEGRPFRPGEVIVKIQADPDRIVLEGDLSPALVA
ALRASPEARVWLGPASLLHAQPLRVRLTWLA
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