prot_P-wetherbeei_contig13847.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13847.1.1
Unique Nameprot_P-wetherbeei_contig13847.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length199
Homology
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BLAST of mRNA_P-wetherbeei_contig13847.1.1 vs. uniprot
Match: A0A835YPR6_9STRA (Polycystin cation channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPR6_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.390e-8
Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 0 
Query:    2 GPFLFVSFIILMVFVVLSMMFAVVAAAYETVIEQAEGRPKSDDPIVRDLKRVGVAAMAAAQRMPGLRALL 71
            GPFL+V+FI+LMV VVLSM+FAV++ A+E   E  EG     DP++RD+ R G   +  A R PGLR LL
Sbjct:  630 GPFLYVTFIVLMVMVVLSMIFAVISNAFEAYRE--EGAADPGDPMIRDMLRAGHKLIQLAYRTPGLRRLL 697
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13847.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YPR6_9STRA6.390e-852.86Polycystin cation channel-domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13847contigP-wetherbeei_contig13847:49..645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13847.1.1mRNA_P-wetherbeei_contig13847.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13847 1..1038 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13847.1.1 ID=prot_P-wetherbeei_contig13847.1.1|Name=mRNA_P-wetherbeei_contig13847.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=199bp
MGPFLFVSFIILMVFVVLSMMFAVVAAAYETVIEQAEGRPKSDDPIVRDL
KRVGVAAMAAAQRMPGLRALLIPPRPPPPPPPIAAEGPVGGGAGDADDGA
SPSSAANEVGARRRRGDSGGGGGVGEADSSLSSVLPPPPPALPPGELFMQ
ELQALEQHQRQLVCKLEGIILSARDAQRVHRERLRRERVRIDDGDDAT*
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