mRNA_P-wetherbeei_contig13838.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13838.1.1 vs. uniprot
Match: A0A3C2B575_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B575_9ACTN) HSP 1 Score: 332 bits (851), Expect = 6.260e-112 Identity = 163/260 (62.69%), Postives = 194/260 (74.62%), Query Frame = 1
Query: 1 MDVAHALGRYLEVADAVAPGLIEGLYVVGSFALDDWHEDHSDIDIVAITAEPATEEDGSQIRLLHALLAEQQPVPHVDGPYLAWGDLVVPPSTGLYRPWSLDGVAHHDGECFEINPITWYTLATYGVTVRGPMRERLGAVLDTEERVRFVVDNLHSYWANVAAQISEVLTAEPDREVTAEMLEWCALGALRLHYTAFTGDVTSKRGAGEHGLSVAPTRFHDAIRAGLALRAGE--PAAVSGALLLDAAALIEWCITEVDA 774
MDVA ALG YL++ D+ APGL+EGLYVVGS+AL DW E SDIDIVA+TA+PAT++D +R +HALL E+QP+PH+DGPYLAWGDLVV P+TGL+RPWSL+G HHDG+CFEINPITWY L YGVTVRGP ERL +D + RVRFVV NL SYW ++ I+ T + + E L+W ALGALRLHYTAFTGDV SKRGAGE+GL VAP FH +R L LRAG P V+ + AAALI WCI +V A
Sbjct: 15 MDVATALGTYLDIVDSAAPGLVEGLYVVGSYALGDWVEGTSDIDIVAVTADPATDDDFGSLRTVHALLTERQPLPHIDGPYLAWGDLVVEPATGLHRPWSLEGSPHHDGDCFEINPITWYVLQRYGVTVRGPRLERLDIPIDIDARVRFVVGNLQSYWRGISNNIAAACTVDTPPAWSDESLQWSALGALRLHYTAFTGDVISKRGAGEYGLQVAPAEFHHVLRRALGLRAGTETPGVVNTDEMATAAALIAWCIDDVSA 274
BLAST of mRNA_P-wetherbeei_contig13838.1.1 vs. uniprot
Match: A0A7K1B0R9_9ACTN (NTP_transf_2 domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K1B0R9_9ACTN) HSP 1 Score: 325 bits (834), Expect = 3.150e-109 Identity = 161/253 (63.64%), Postives = 191/253 (75.49%), Query Frame = 1
Query: 4 DVAHALGRYLEVADAVAPGLIEGLYVVGSFALDDWHEDHSDIDIVAITAEPATEEDGSQIRLLHALLAEQQPVPHVDGPYLAWGDLVVPPSTGLYRPWSLDGVAHHDGECFEINPITWYTLATYGVTVRGPMRERLGAVLDTEERVRFVVDNLHSYWANVAAQISEVLTAEPDREVTAEMLEWCALGALRLHYTAFTGDVTSKRGAGEHGLSVAPTRFHDAIRAGLALRAGEPAAVSGAL--LLDAAALIEWC 756
DVA ALG YLE+ D+ APGL+EGLYVVGSFALDDW SDIDIVA+TAEPAT+ED + + HALLAE QP P+VDGPY+AWGDL+ PP L+RPWSL+G HDG+CFE+NP+TWY LAT+GVTVRGP +RLG LD + RVRFVVDNL SYWA +A Q+ E A PD TA+ LEWCALGALRLH+TAF G V SK GAGE+GL +AP+RF +R +A+RAG A S + +L AA LI WC
Sbjct: 21 DVASALGTYLEIVDSCAPGLVEGLYVVGSFALDDWQPGRSDIDIVAVTAEPATDEDAANLVTAHALLAEHQPRPYVDGPYVAWGDLITPPMA-LHRPWSLEGRLLHDGDCFELNPVTWYVLATHGVTVRGPAVDRLGVYLDVDARVRFVVDNLASYWAPLADQVREACEANPDHHFTADALEWCALGALRLHHTAFQGGVVSKTGAGEYGLRIAPSRFAPVLREAMAIRAGTSTATSASAHQMLLAAELITWC 272
BLAST of mRNA_P-wetherbeei_contig13838.1.1 vs. uniprot
Match: A0A7X9KHY2_9ACTN (NTP_transf_2 domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KHY2_9ACTN) HSP 1 Score: 244 bits (623), Expect = 1.140e-78 Identity = 119/183 (65.03%), Postives = 143/183 (78.14%), Query Frame = 1
Query: 1 MDVAHALGRYLEVADAVAPGLIEGLYVVGSFALDDWHEDHSDIDIVAITAEPATEEDGSQIRLLHALLAEQQPVPHVDGPYLAWGDLVVPPSTGLYRPWSLDGVAHHDGECFEINPITWYTLATYGVTVRGPMRERLGAVLDTEERVRFVVDNLHSYWANVAAQISEVLT-AEPDREVTAEML 546
MDVA ALG YL++AD++APGL+EGLYVVGS+AL DW E SDIDIVA+TAEPAT++D +R +HALLAEQ P+P +DGPYLAWGDL++ P+TGL+RPW LDG HDGECFEINPITWYTLATYGVTVRGP E LG +D E R+RFVVDNL YW VA ++ AEP A+++
Sbjct: 1 MDVATALGTYLDIADSIAPGLVEGLYVVGSYALGDWTEGTSDIDIVAVTAEPATDDDFGSLRTVHALLAEQ-PLPFIDGPYLAWGDLLIEPATGLHRPWVLDGRLRHDGECFEINPITWYTLATYGVTVRGPAVESLGIPIDIEARIRFVVDNLQGYWRGVADGVAAACARAEPPAFSAADLV 182
BLAST of mRNA_P-wetherbeei_contig13838.1.1 vs. uniprot
Match: A0A4V6Q1X7_9ACTN (Nucleotidyltransferase-like protein n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4V6Q1X7_9ACTN) HSP 1 Score: 206 bits (525), Expect = 9.120e-63 Identity = 113/215 (52.56%), Postives = 139/215 (64.65%), Query Frame = 1
Query: 4 DVAHALGRYLEVADAVAPGLIEGLYVVGSFALDDWHEDHSDIDIVAITAEPATEEDGSQIRLLHALLAEQQPVPHVDGPYLAWGDLVVPPSTGLYRPWSLDGVAHHDGECFEINPITWYTLATYGVTVRGPMRERLGAVLDTEERVRFVVDNLHSYWANVAAQISEVLTAEPDREVTAEMLEWCALGALRLHYTAFTGDVTSKRGAGEHGLSVAP 648
+ AL R+L V D VAPG+IEGLY VGS ALDDW + SDIDIVA TA+PAT++D +R H + A + +DGP LAWGD+ V P + L+RPWSLDG HDG+CFEINPITWYTLA +GV VRGP LG V D ++R FV DN+ +YW VA I+ + AE+ EWC LG R+ T TG V SK AGE+ +S AP
Sbjct: 5 EARSALDRWLAVHDEVAPGVIEGLYAVGSLALDDW-QPRSDIDIVAFTADPATDDDAVLLREAHDV-ATAELDRSIDGPRLAWGDVTVAPIS-LHRPWSLDGEFRHDGDCFEINPITWYTLAVHGVAVRGPDPAALGVVTDVDDRRMFVRDNVGTYWKQVAETINAAADDPERSQFDAEVTEWCVLGIARMFATYRTGRVFSKSAAGEYLVSEAP 216
BLAST of mRNA_P-wetherbeei_contig13838.1.1 vs. uniprot
Match: A0A3C1L3Y7_9ACTN (DUF4111 domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C1L3Y7_9ACTN) HSP 1 Score: 177 bits (449), Expect = 9.490e-53 Identity = 92/152 (60.53%), Postives = 102/152 (67.11%), Query Frame = 1
Query: 328 ECFEINPITWYTLATYGVTVRGPMRERLGAVLDTEERVRFVVDNLHSYWANVAAQISEVLTAEPDREVTAEMLEWCALGALRLHYTAFTGDVTSKRGAGEHGLSVAPTRFHDAIRAGLALRA-GEPAAVSGALLLDAAALIEWCITEVDAGR 780
ECFEINPITWYTLATYGVTVRGP E LG +D E R+RFVVDNL YW VA ++ +A L WCALG LRLHYTAFTGDVTSKRGAGEHGL+ AP FH+ +R LA RA GE + + AAL EWCI EV A R
Sbjct: 1 ECFEINPITWYTLATYGVTVRGPAVESLGIPIDIEARIRFVVDNLQGYWRGVADGVAAACARAEPPAFSAADLVWCALGPLRLHYTAFTGDVTSKRGAGEHGLTAAPAAFHEVLREALAARATGELGPATTEQMRVTAALTEWCIAEVAAAR 152
BLAST of mRNA_P-wetherbeei_contig13838.1.1 vs. uniprot
Match: UPI0007A54F1A (nucleotidyltransferase domain-containing protein n=1 Tax=Nocardia salmonicida TaxID=53431 RepID=UPI0007A54F1A) HSP 1 Score: 162 bits (411), Expect = 2.050e-45 Identity = 92/231 (39.83%), Postives = 122/231 (52.81%), Query Frame = 1
Query: 7 VAHALGRYLEVADAVAPGLIEGLYVVGSFALDDWHEDHSDIDIVAITAEPATEEDGSQIRLLHALLAEQQPVPHVDGPYLAWGDLVVPPSTGLYRPWSLDGVAHHDGECFEINPITWYTLATYGVTVRGPMRERLGAVLDTEERVRFVVDNLHSYWANVAAQISEVLTAEPDREVTAEMLEWCALGALRLHYTAFTGDVTSKRGAGEHGLSVAPTRFHDAIRAGLALRAGE 699
V + YL +ADA APGLIEGLY+ GS AL D+H SDID VA+TA P + + +H L Q+P P DG YL W DL P+ + RP S +G + + P+ W+TLA +GV +RGP LG D + NL YWAN ++ + +++ +T W G R+HYT TGD+TSK GAG H L P R+H I L LR G+
Sbjct: 7 VTDTVESYLALADAEAPGLIEGLYLEGSVALGDFHPKASDIDFVAVTATPPDAAALATLERIHTQLRRQRPRPFFDGTYLTWNDLAAGPTAAVDRPISHEGQLQAESVAGQQTPVAWHTLAHHGVALRGPAIGDLGIWTDPAALAAWQNTNLEKYWANGLSRAARLISKPGLGLLTDYGTVWTVTGIARIHYTLATGDITSKDGAGRHALHTFPDRWHRIINEALRLRRGD 237
BLAST of mRNA_P-wetherbeei_contig13838.1.1 vs. uniprot
Match: UPI0018943E5C (DUF4111 domain-containing protein n=3 Tax=Nocardia brasiliensis TaxID=37326 RepID=UPI0018943E5C) HSP 1 Score: 161 bits (407), Expect = 7.490e-45 Identity = 97/228 (42.54%), Postives = 118/228 (51.75%), Query Frame = 1
Query: 7 VAHALGRYLEVADAVAPGLIEGLYVVGSFALDDWHEDHSDIDIVAITAEPATEEDGSQIRLLHALLAEQQPVPHVDGPYLAWGDLVVPPSTGLYRPWSLDGVAHHDGECFEINPITWYTLATYGVTVRGPMRERLGAVLDTEERVRFVVDNLHSYWANVAAQISEVLTAEPDREVTAEMLEWCALGALRLHYTAFTGDVTSKRGAGEHGLSVAPTRFHDAIRAGLALR 690
VA + YL +ADA APGLIEGLY+ GS ALDD+ SDID VA+TA P + + +HA L +QQ P DG YL W DL P RP SL G G + P+TW+TLA +GVT+RGP LG D + NL YWA A + + + +T W G RLHYT TGD+TSK GAG H P R+H I L LR
Sbjct: 7 VAQTIDSYLALADAEAPGLIEGLYLEGSVALDDYRPSASDIDFVAVTAAPPDRAATAALARIHARLRQQQRRPFFDGSYLTWADLTAGPDAATGRPISLGGKFQPRGA--DQTPVTWHTLAGHGVTLRGPDITELGIWTDAAALAAWQNTNLDDYWARRLAAGARLASRHALGLLTEYGTIWTVTGIARLHYTIVTGDITSKDGAGRHARQYFPDRWHRVIDEALRLR 232
BLAST of mRNA_P-wetherbeei_contig13838.1.1 vs. uniprot
Match: A0A0C1B2U2_9NOCA (Uncharacterized protein n=2 Tax=Nocardia TaxID=1817 RepID=A0A0C1B2U2_9NOCA) HSP 1 Score: 158 bits (399), Expect = 1.170e-43 Identity = 96/228 (42.11%), Postives = 116/228 (50.88%), Query Frame = 1
Query: 7 VAHALGRYLEVADAVAPGLIEGLYVVGSFALDDWHEDHSDIDIVAITAEPATEEDGSQIRLLHALLAEQQPVPHVDGPYLAWGDLVVPPSTGLYRPWSLDGVAHHDGECFEINPITWYTLATYGVTVRGPMRERLGAVLDTEERVRFVVDNLHSYWANVAAQISEVLTAEPDREVTAEMLEWCALGALRLHYTAFTGDVTSKRGAGEHGLSVAPTRFHDAIRAGLALR 690
VA + YL ADA APGLIEGLY+ GS ALDD+ SDID VA+TA P + + +HA L Q+P P DG YL W DL P RP +L G G P+TW+TLA +GVT+RGP R L D + NL YWA A + + + +T W G RLHYT TGD+TSK GAG H P R+H I L LR
Sbjct: 7 VAQTIDSYLASADAEAPGLIEGLYLEGSVALDDYRPGASDIDFVAVTAAPPDRAAVAALERVHARLRHQRPRPFFDGSYLTWADLAAGPDAAAGRPSTLQGKFQPRGT--HQTPVTWHTLAGHGVTLRGPDRTELDLWTDAAALAAWQNTNLDDYWARGLAAGARLASKPGLGLLTDYGTVWTVTGIARLHYTIATGDITSKDGAGRHARQYFPDRWHRVIDEALRLR 232
BLAST of mRNA_P-wetherbeei_contig13838.1.1 vs. uniprot
Match: A0A2N3VD86_9NOCA (Uncharacterized protein DUF4111 n=2 Tax=Nocardia fluminea TaxID=134984 RepID=A0A2N3VD86_9NOCA) HSP 1 Score: 156 bits (395), Expect = 1.090e-42 Identity = 90/231 (38.96%), Postives = 121/231 (52.38%), Query Frame = 1
Query: 7 VAHALGRYLEVADAVAPGLIEGLYVVGSFALDDWHEDHSDIDIVAITAEPATEEDGSQIRLLHALLAEQQPVPHVDGPYLAWGDLVVPPSTGLYRPWSLDGVAHHDGECFEINPITWYTLATYGVTVRGPMRERLGAVLDTEERVRFVVDNLHSYWANVAAQISEVLTAEPDREVTAEMLEWCALGALRLHYTAFTGDVTSKRGAGEHGLSVAPTRFHDAIRAGLALRAGE 699
V + YL +ADA APGLIEG Y+ GS AL D+ + SDID VA+TA P + + +H L +QQ P DG YL W DL P+ + RP SL+G + P+TW+TLA +GV +RGP + L D + NL YWAN ++ + +++ +T W G RLHYT TGD+TSK GAG H L P +H I L +R G+
Sbjct: 36 VTDTVESYLALADAEAPGLIEGFYLEGSVALGDFRPEASDIDFVAVTAAPPDAVVLAALERVHTQLRQQQRRPFFDGTYLTWNDLTAGPAAAIGRPISLEGQLQAKSFAGQQTPVTWHTLAHHGVALRGPAIDDLDIWTDPAALATWQNTNLDRYWANGLSRAARLISKPGIGLLTDYGTVWTVTGISRLHYTIATGDITSKDGAGRHALHTFPDHWHRIINEALRIRRGD 266
BLAST of mRNA_P-wetherbeei_contig13838.1.1 vs. uniprot
Match: UPI0018A8A2DB (DUF4111 domain-containing protein n=1 Tax=Nocardia bovistercoris TaxID=2785916 RepID=UPI0018A8A2DB) HSP 1 Score: 155 bits (392), Expect = 2.970e-42 Identity = 90/231 (38.96%), Postives = 121/231 (52.38%), Query Frame = 1
Query: 7 VAHALGRYLEVADAVAPGLIEGLYVVGSFALDDWHEDHSDIDIVAITAEPATEEDGSQIRLLHALLAEQQPVPHVDGPYLAWGDLVVPPSTGLYRPWSLDGVAHHDGECFEINPITWYTLATYGVTVRGPMRERLGAVLDTEERVRFVVDNLHSYWANVAAQISEVLTAEPDREVTAEMLEWCALGALRLHYTAFTGDVTSKRGAGEHGLSVAPTRFHDAIRAGLALRAGE 699
V + YL +ADA APGLIEGLY+ GS AL D+ + DID VA+TA P + + +H L +QQ P DG YL W DL P+ + RP+S +G P+TW+TLA +GV +RGP L D + NL +YWA+ ++ + +++ +T W G RLHYT TGD+TSK GAG H L P R+H I L LR G+
Sbjct: 36 VTDTVEFYLALADAEAPGLIEGLYLEGSVALGDFRPEAGDIDFVAVTAAPPDAAALATLERIHTQLRQQQRRPFFDGTYLTWNDLTAGPAAAIGRPFSHEGQLQAKSGAGPQTPVTWHTLAHHGVALRGPAIGDLDIWTDPAALAAWQNTNLENYWASGLSRAARLISKPGLGLLTDYGTVWTVTGIARLHYTLATGDITSKDGAGRHALHTFPDRWHRIINEALRLRRGD 266 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13838.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13838.1.1 >prot_P-wetherbeei_contig13838.1.1 ID=prot_P-wetherbeei_contig13838.1.1|Name=mRNA_P-wetherbeei_contig13838.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp MDVAHALGRYLEVADAVAPGLIEGLYVVGSFALDDWHEDHSDIDIVAITAback to top mRNA from alignment at P-wetherbeei_contig13838:402..1184+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13838.1.1 ID=mRNA_P-wetherbeei_contig13838.1.1|Name=mRNA_P-wetherbeei_contig13838.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig13838:402..1184+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13838:402..1184+ >mRNA_P-wetherbeei_contig13838.1.1 ID=mRNA_P-wetherbeei_contig13838.1.1|Name=mRNA_P-wetherbeei_contig13838.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig13838:402..1184+ (Phaeothamnion wetherbeei SAG_119_79)back to top |