mRNA_P-wetherbeei_contig13836.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13836.1.1
Unique NamemRNA_P-wetherbeei_contig13836.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13836.1.1 vs. uniprot
Match: A0A3D5DBM9_9GAMM (Glutamate synthase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DBM9_9GAMM)

HSP 1 Score: 879 bits (2270), Expect = 0.000e+0
Identity = 403/528 (76.33%), Postives = 465/528 (88.07%), Query Frame = 1
Query:   10 TDIGNPNYFHKVVDCQWACPAHTPVPEYIRLIAAGRYADAYMVNWKSNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKGDVSDRMPAPAAKKNGKRIACIGAGPASLTVARDLAPLGYDVTLYDGSARAGGMIRSQIPKFRLPEEVIDEEVGYILNLGVNFKSGVWVNSLKDILAEKYDAVFVGTGAPRGRDLNIPGRKEAAEHIHIGIDWLSSVAFGHIDKIAKRVIVLGGGNTAMDCCRSSKRLGGEEVTVIVRSSFEEMKASPWEKEDAQHEGIPILNFMVPKSFEHENGKLTGMTFETVRAEYDTKGRRNLVPTGEPDKFVAADAVLIAVGQENAFPWIERDIGLEFNEWDMPKLNEETFQSSIPNVFFGGDSALGPKNIIWAVAHGHDAAVSIDKFLHIDDVSERPLPQVSITSQKMGIHEWSYDNDVSNDHRFKVPLKDLKLALANIKVEVELGFDQKLALAEAERCLNCDIQTVFTDKLCIECDACVDICPVDCINFTDNGEEVEVRANL 1593
            TDI NP+YFHKVVDCQWACPAHTP+PEYIRL+AAGR++DAYM+NW SNVFPGILGRTCDRPCEPACRRGRVE+EPVAICRLKRVAAD+KGD+  R+P PA KKNGKRIAC+GAGPASLTVARDL PLGY+V +YDG  RAGGMIRSQIPKFRLPE VIDEEVGYIL LGV F+   WV SLK +L E YDAVFVGTGAPRGRDLNIPGRKEA+++IHIGIDWLSSV+FGHI+KI KRVIVLGGGNTAMDCCRSSKRLGG++V V+VRS F+EMKAS WEKEDA HE IPILNF+VPK F+H  GKL G+ F+ V A+YD  GRR L+ TGEPD+++ AD VL+AVGQENAFPWIERDIG+EF+EW MP +++ T+++++PNVFFGGD+A GP+NIIWAVAHGHDAA+SIDK+ H +D+S RP P+V  +SQKMGIHEWSYDND+SND R+KVPLKDL+ ALANIKVEVELG+DQ LA+AEAERCLNCD+QT+F+  LCIECDAC DICP DCINF  N +E  +R  L
Sbjct:    4 TDISNPDYFHKVVDCQWACPAHTPIPEYIRLVAAGRHSDAYMINWYSNVFPGILGRTCDRPCEPACRRGRVEDEPVAICRLKRVAADFKGDIRKRLPTPANKKNGKRIACVGAGPASLTVARDLLPLGYEVVIYDGEDRAGGMIRSQIPKFRLPERVIDEEVGYILELGVEFRDNSWVKSLKKLLTEDYDAVFVGTGAPRGRDLNIPGRKEASQNIHIGIDWLSSVSFGHINKIGKRVIVLGGGNTAMDCCRSSKRLGGKDVKVVVRSGFDEMKASAWEKEDAMHEDIPILNFLVPKEFKHSKGKLKGVIFDKVEAKYDDNGRRTLISTGEPDEYIEADDVLVAVGQENAFPWIERDIGIEFDEWGMPIVDKSTYRATLPNVFFGGDAAFGPENIIWAVAHGHDAAISIDKYCHGEDISVRPPPRVKFSSQKMGIHEWSYDNDISNDLRYKVPLKDLRNALANIKVEVELGYDQNLAVAEAERCLNCDVQTIFSHNLCIECDACEDICPTDCINFITNDDEANLRTRL 531          
BLAST of mRNA_P-wetherbeei_contig13836.1.1 vs. uniprot
Match: A0A523PEQ1_9PROT (4Fe-4S dicluster domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PEQ1_9PROT)

HSP 1 Score: 869 bits (2245), Expect = 2.650e-314
Identity = 408/528 (77.27%), Postives = 458/528 (86.74%), Query Frame = 1
Query:   10 TDIGNPNYFHKVVDCQWACPAHTPVPEYIRLIAAGRYADAYMVNWKSNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKGDVSDRMPAPAAKKNGKRIACIGAGPASLTVARDLAPLGYDVTLYDGSARAGGMIRSQIPKFRLPEEVIDEEVGYILNLGVNFKSGVWVNSLKDILAEKYDAVFVGTGAPRGRDLNIPGRKEAAEHIHIGIDWLSSVAFGHIDKIAKRVIVLGGGNTAMDCCRSSKRLGGEEVTVIVRSSFEEMKASPWEKEDAQHEGIPILNFMVPKSFEHENGKLTGMTFETVRAEYDTKGRRNLVPTGEPDKFVAADAVLIAVGQENAFPWIERDIGLEFNEWDMPKLNEETFQSSIPNVFFGGDSALGPKNIIWAVAHGHDAAVSIDKFLHIDDVSERPLPQVSITSQKMGIHEWSYDNDVSNDHRFKVPLKDLKLALANIKVEVELGFDQKLALAEAERCLNCDIQTVFTDKLCIECDACVDICPVDCINFTDNGEEVEVRANL 1593
            TD  NP+YFHKVVDCQWACPAHTPVPEYIRL+AAGRYADAYM+NW SNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAAD+KGD+   +P    KKNGKRIACIGAGPASLTVA DL PLGY V + DG +RAGGMIRSQIP+FRLPE VIDEEVGYI++LGV F+   WV SLK+ILAE YDA+F+GTGAPRGR+L++PGR+EAA++I+IGIDWLSSV+FGHI+KI +RVIVLGGGNTAMDCCRSS+RLGG++V VIVRS F+EMKAS WEKEDA HE IPILN++VPK F H  GKLTGMTF  V A YD  GRR LVPTGE D+    D VL+AVGQENAFPWIERDIGLEFNE DMP ++E T QS++PNVFFGGDSA GPKNIIWAVAHGHDAA+SIDKF H +DV  RP P V+++SQKMGIHEWSYDND+SND R+KVPLKDL+ ALANIKVEVELG+D  LA+AEAERCLNCDIQTVF   LCIECDAC DICP DCINFT NG+E ++R  L
Sbjct:    4 TDTDNPDYFHKVVDCQWACPAHTPVPEYIRLVAAGRYADAYMINWYSNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADFKGDIRKLLPKVKRKKNGKRIACIGAGPASLTVAHDLVPLGYKVEIIDGESRAGGMIRSQIPRFRLPERVIDEEVGYIVDLGVKFRGNTWVESLKEILAEDYDAIFIGTGAPRGRNLDLPGRREAADNIYIGIDWLSSVSFGHIEKIGQRVIVLGGGNTAMDCCRSSRRLGGQDVKVIVRSGFDEMKASAWEKEDAMHENIPILNYLVPKEFHHTKGKLTGMTFGKVEAVYDDDGRRRLVPTGEADQHFECDDVLVAVGQENAFPWIERDIGLEFNELDMPVVDERTMQSTLPNVFFGGDSAFGPKNIIWAVAHGHDAAISIDKFCHAEDVGVRPPPLVNLSSQKMGIHEWSYDNDISNDLRYKVPLKDLRNALANIKVEVELGYDPNLAVAEAERCLNCDIQTVFDHNLCIECDACEDICPTDCINFTTNGDESDLRGRL 531          
BLAST of mRNA_P-wetherbeei_contig13836.1.1 vs. uniprot
Match: A0A1W6ZVP4_9HYPH (Glutamate synthase n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZVP4_9HYPH)

HSP 1 Score: 864 bits (2233), Expect = 1.650e-312
Identity = 402/531 (75.71%), Postives = 465/531 (87.57%), Query Frame = 1
Query:    1 LKPTDIGNPNYFHKVVDCQWACPAHTPVPEYIRLIAAGRYADAYMVNWKSNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKGDVSDRMPAPAAKKNGKRIACIGAGPASLTVARDLAPLGYDVTLYDGSARAGGMIRSQIPKFRLPEEVIDEEVGYILNLGVNFKSGVWVNSLKDILAEKYDAVFVGTGAPRGRDLNIPGRKEAAEHIHIGIDWLSSVAFGHIDKIAKRVIVLGGGNTAMDCCRSSKRLGGEEVTVIVRSSFEEMKASPWEKEDAQHEGIPILNFMVPKSFEHENGKLTGMTFETVRAEYDTKGRRNLVPTGEPDKFVAADAVLIAVGQENAFPWIERDIGLEFNEWDMPKLNEETFQSSIPNVFFGGDSALGPKNIIWAVAHGHDAAVSIDKFLHIDDVSERPLPQVSITSQKMGIHEWSYDNDVSNDHRFKVPLKDLKLALANIKVEVELGFDQKLALAEAERCLNCDIQTVFTDKLCIECDACVDICPVDCINFTDNGEEVEVRANL 1593
            +K TDI  P+YFHKVVDCQWACPAHTPVPEYIRLIA GRY+DAYMVNW+SNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYK DVS RMP  A +KNGKR+A +G GPASLTVARDLAPLGY+  ++DG  RAGGM+R+QIPKFRLP+ VIDEE GYIL+LGV F+ G  ++SLK +LAE YDAVFVG+GAPRGRDL+IPGRKEAA +IHIGIDWLSS+AFGHIDKI KRVIVLGGGNTAMDCCRS++RLGGE+V V+VRS F+EMKASPWEKEDA HE IPI N++VPK+F HENG+LTG+TFE V+AEYD KGRRNLVP+GEPD+    D VL+AVGQENA+PWIERDIG+EF++W+MP ++ +TF S+ P VFFGGD+A GPKNIIWAVAHGHDAA+SI K L  ++++ERPLP V I SQKMGIHEWSYDND++ D RF+VPL++  +AL +IK EVELGFD KLAL EA RCLNCD+QTVFT +LCIECDACVDICP+DCI FT NGEE ++R  L
Sbjct:    1 MKLTDISAPDYFHKVVDCQWACPAHTPVPEYIRLIAQGRYSDAYMVNWQSNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKNDVSARMPRKAQRKNGKRVALVGGGPASLTVARDLAPLGYECIVFDGDPRAGGMMRTQIPKFRLPDSVIDEETGYILDLGVEFRGGQRIDSLKSLLAENYDAVFVGSGAPRGRDLDIPGRKEAARNIHIGIDWLSSIAFGHIDKIGKRVIVLGGGNTAMDCCRSARRLGGEDVQVVVRSGFDEMKASPWEKEDAMHEDIPIHNYLVPKAFTHENGRLTGITFEKVKAEYDAKGRRNLVPSGEPDQHFPCDDVLVAVGQENAYPWIERDIGIEFDKWNMPVVDPKTFVSTNPKVFFGGDAAFGPKNIIWAVAHGHDAALSIHKLLSGEEITERPLPHVEIESQKMGIHEWSYDNDITLDQRFRVPLREKTVALRDIKAEVELGFDVKLALGEAHRCLNCDVQTVFTGQLCIECDACVDICPMDCITFTQNGEEADLRQRL 531          
BLAST of mRNA_P-wetherbeei_contig13836.1.1 vs. uniprot
Match: A0A257PV16_9PROT (Glutamate synthase n=1 Tax=Rhodospirillales bacterium 20-64-7 TaxID=1970566 RepID=A0A257PV16_9PROT)

HSP 1 Score: 863 bits (2230), Expect = 3.930e-312
Identity = 409/531 (77.02%), Postives = 457/531 (86.06%), Query Frame = 1
Query:    1 LKPTDIGNPNYFHKVVDCQWACPAHTPVPEYIRLIAAGRYADAYMVNWKSNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKGDVSDRMPAPAAKKNGKRIACIGAGPASLTVARDLAPLGYDVTLYDGSARAGGMIRSQIPKFRLPEEVIDEEVGYILNLGVNFKSGVWVNSLKDILAEKYDAVFVGTGAPRGRDLNIPGRKEAAEHIHIGIDWLSSVAFGHIDKIAKRVIVLGGGNTAMDCCRSSKRLGGEEVTVIVRSSFEEMKASPWEKEDAQHEGIPILNFMVPKSFEHENGKLTGMTFETVRAEYDTKGRRNLVPTGEPDKFVAADAVLIAVGQENAFPWIERDIGLEFNEWDMPKLNEETFQSSIPNVFFGGDSALGPKNIIWAVAHGHDAAVSIDKFLHIDDVSERPLPQVSITSQKMGIHEWSYDNDVSNDHRFKVPLKDLKLALANIKVEVELGFDQKLALAEAERCLNCDIQTVFTDKLCIECDACVDICPVDCINFTDNGEEVEVRANL 1593
            + PTDI NPNYFHKVVDCQWACPAHTPVPEYIR+IAA RYADAYMVNW SNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKGDVS RMPAP  ++NGKRIA +GAGPAS+TV RDLAPLGY+  +YDG +RAGGMIRSQIPKFRLPEEVIDEEVGYI  LG   + G  V+SLK +L E YDAVFVG+GAP+GRDLNIPGR+EAA +IHIGIDWL++V+FGH+  I +RVIVLGGGNTAMDCCRSS+RLGG++V VIVRS FEEMKASPWEKEDA HE IPILN++VPK F+H NG+L GMTFE V+AEYD +GRR LVPTGEPD F   D VL+AVGQENAFPWIERDIGL+FNEW MP ++E TFQS+ P VFFGGDSA GPKNIIWAVAHGH AA+SI +F    DV++RP P V++ SQKMGIHEWSYDN +S D RFKVP +D   AL +I+ EVELGFD  LA AEAERCLNCD+QTVFTDKLCIECDACVDICPVDC+ FT NGEE E+R  L
Sbjct:    1 MLPTDISNPNYFHKVVDCQWACPAHTPVPEYIRMIAAERYADAYMVNWNSNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKGDVSGRMPAPPTERNGKRIALVGAGPASMTVVRDLAPLGYECVVYDGESRAGGMIRSQIPKFRLPEEVIDEEVGYITALGPEMRLGQRVDSLKALLDEGYDAVFVGSGAPKGRDLNIPGRQEAAANIHIGIDWLANVSFGHVKTIGRRVIVLGGGNTAMDCCRSSRRLGGDDVKVIVRSGFEEMKASPWEKEDALHEDIPILNYLVPKEFKHHNGQLYGMTFEKVKAEYDARGRRKLVPTGEPDAFFECDDVLVAVGQENAFPWIERDIGLQFNEWTMPVVDETTFQSTNPRVFFGGDSAFGPKNIIWAVAHGHQAAISIHQFCQGADVADRPPPMVTLASQKMGIHEWSYDNGISLDLRFKVPHRDKLAALNDIRAEVELGFDPVLAYAEAERCLNCDVQTVFTDKLCIECDACVDICPVDCLTFTANGEEAELRTRL 531          
BLAST of mRNA_P-wetherbeei_contig13836.1.1 vs. uniprot
Match: UPI00131D98B8 (FAD-dependent oxidoreductase n=1 Tax=Acidisphaera sp. S103 TaxID=1747223 RepID=UPI00131D98B8)

HSP 1 Score: 862 bits (2227), Expect = 1.120e-311
Identity = 406/531 (76.46%), Postives = 460/531 (86.63%), Query Frame = 1
Query:    1 LKPTDIGNPNYFHKVVDCQWACPAHTPVPEYIRLIAAGRYADAYMVNWKSNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKGDVSDRMPAPAAKKNGKRIACIGAGPASLTVARDLAPLGYDVTLYDGSARAGGMIRSQIPKFRLPEEVIDEEVGYILNLGVNFKSGVWVNSLKDILAEKYDAVFVGTGAPRGRDLNIPGRKEAAEHIHIGIDWLSSVAFGHIDKIAKRVIVLGGGNTAMDCCRSSKRLGGEEVTVIVRSSFEEMKASPWEKEDAQHEGIPILNFMVPKSFEHENGKLTGMTFETVRAEYDTKGRRNLVPTGEPDKFVAADAVLIAVGQENAFPWIERDIGLEFNEWDMPKLNEETFQSSIPNVFFGGDSALGPKNIIWAVAHGHDAAVSIDKFLHIDDVSERPLPQVSITSQKMGIHEWSYDNDVSNDHRFKVPLKDLKLALANIKVEVELGFDQKLALAEAERCLNCDIQTVFTDKLCIECDACVDICPVDCINFTDNGEEVEVRANL 1593
            ++ TDI +P+YFHKVVDCQWACPAHTPVPEYIRLIAAGRYADA+M+NWKSNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKGDVSDRMP     +NGK+IA +GAGPASLTVARDLAPLGY + +YDG  RAGGMIRSQIPKFRLPEEVIDEEVGYI ++G   + G  V+SLK +L E YDAVF+G+GAPRGRDL++PGR+EAA +IHIGIDWLSSV+FGHI KI +RVIVLGGGNTAMDCCRSS+RLGG++V VIVRS FEEMKASPWEKEDA  E IPILNF+VPK F+H +GKL GMTFE V+AEYD +GRR LVPTGEPD F   D VL+AVGQENAFPWIERDIG++FNEWDMP +NE TFQS+ P VF GGD+A GPKNIIWAVAHGH AA+SI +F    DV++RP P V++ SQKMGIHEWSYDN VS D RFKVP ++  +AL +IK EVELGFD KLA AEA+RCLNCD+QT+FTD LCIECDACVDICPVDCI FT++GEE E+R  L
Sbjct:    1 MQATDIKDPDYFHKVVDCQWACPAHTPVPEYIRLIAAGRYADAFMINWKSNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKGDVSDRMPPTPTTRNGKKIALVGAGPASLTVARDLAPLGYHLVIYDGDTRAGGMIRSQIPKFRLPEEVIDEEVGYITDMGPEMRLGQRVDSLKSLLNEDYDAVFIGSGAPRGRDLDLPGRQEAAANIHIGIDWLSSVSFGHITKIGRRVIVLGGGNTAMDCCRSSRRLGGDDVKVIVRSGFEEMKASPWEKEDAIGEDIPILNFLVPKEFKHHDGKLYGMTFEKVQAEYDARGRRKLVPTGEPDHFFECDDVLVAVGQENAFPWIERDIGIDFNEWDMPVVNETTFQSTEPRVFLGGDAAFGPKNIIWAVAHGHQAAISIHQFCQGTDVNDRPPPMVTLVSQKMGIHEWSYDNPVSPDLRFKVPHRNKTIALKDIKAEVELGFDDKLAFAEAQRCLNCDVQTIFTDNLCIECDACVDICPVDCITFTEDGEEAELRTRL 531          
BLAST of mRNA_P-wetherbeei_contig13836.1.1 vs. uniprot
Match: A0A536YKP8_9PROT (4Fe-4S dicluster domain-containing protein n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YKP8_9PROT)

HSP 1 Score: 860 bits (2222), Expect = 9.740e-311
Identity = 413/537 (76.91%), Postives = 461/537 (85.85%), Query Frame = 1
Query:    1 LKPTDIGNPNYFHKVVDCQWACPAHTPVPEYIRLIAAGRYADAYMVNWKSNVFPGILGRTCDRPCEPACRRGRVEE------EPVAICRLKRVAADYKGDVSDRMPAPAAKKNGKRIACIGAGPASLTVARDLAPLGYDVTLYDGSARAGGMIRSQIPKFRLPEEVIDEEVGYILNLGVNFKSGVWVNSLKDILAEKYDAVFVGTGAPRGRDLNIPGRKEAAEHIHIGIDWLSSVAFGHIDKIAKRVIVLGGGNTAMDCCRSSKRLGGEEVTVIVRSSFEEMKASPWEKEDAQHEGIPILNFMVPKSFEHENGKLTGMTFETVRAEYDTKGRRNLVPTGEPDKFVAADAVLIAVGQENAFPWIERDIGLEFNEWDMPKLNEETFQSSIPNVFFGGDSALGPKNIIWAVAHGHDAAVSIDKFLHIDDVSERPLPQVSITSQKMGIHEWSYDNDVSNDHRFKVPLKDLKLALANIKVEVELGFDQKLALAEAERCLNCDIQTVFTDKLCIECDACVDICPVDCINFTDNGEEVEVRANL 1593
            +KPTDIG P YFHKVVDCQWACPAHTPVPEYIRLIAAGRY DAYMVNW SNVFPGILGRTCDRPCEPACRRGRVEE      EPVAICRLKRVAAD KGDV  RMP  AAKKNGKRIACIGAGPASLTVARDLAPLGY VT++D   RAGGMI SQIP+FRLP EVIDEEVGYIL+LGV FK G  + S+K +LAE YDA+FVG+GAPRGRDL+IPGRKEAA++IHIGIDWLSSV+FGH D+I KRVIVLGGGNTAMDCCRSSKRLGGE+V VIVRS FEEMKASPWEKEDAQHEGIPILN++VPK+FEHENGKLTGMTFE V+A  D KGRR+L+PTGEPD+    D VL+AVGQENAFPWIERD G++F++  MP ++  T QS+   VFFGGDSA GPKNIIWAVAHGHDAA+SIDK L+ +D+ ERP P V+++SQKMGIHEWSYDN +S D R+KVP KD  + L NIKVEVELGFD      EA+RCLNCD+QTVF D+LCIECDACVDICP+DCI+FT NGEE ++R  L
Sbjct:    1 MKPTDIGVPEYFHKVVDCQWACPAHTPVPEYIRLIAAGRYDDAYMVNWHSNVFPGILGRTCDRPCEPACRRGRVEENNGEKPEPVAICRLKRVAADNKGDVKARMPKAAAKKNGKRIACIGAGPASLTVARDLAPLGYHVTVFDQDPRAGGMIWSQIPRFRLPMEVIDEEVGYILDLGVEFKGGTKIGSMKKLLAEDYDAIFVGSGAPRGRDLDIPGRKEAAKNIHIGIDWLSSVSFGHTDRIGKRVIVLGGGNTAMDCCRSSKRLGGEDVKVIVRSGFEEMKASPWEKEDAQHEGIPILNYLVPKTFEHENGKLTGMTFEKVKAVRDEKGRRSLLPTGEPDQRFECDDVLVAVGQENAFPWIERDAGIQFDQHGMPVVDMVTMQSTQAKVFFGGDSAFGPKNIIWAVAHGHDAAISIDKLLNGEDLKERPSPIVNLSSQKMGIHEWSYDNAISPDERYKVPWKDKTITLKNIKVEVELGFDPATGFKEAQRCLNCDVQTVFADRLCIECDACVDICPMDCISFTRNGEEADLRGRL 537          
BLAST of mRNA_P-wetherbeei_contig13836.1.1 vs. uniprot
Match: A0A6N7GQF9_9HYPH (4Fe-4S dicluster domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GQF9_9HYPH)

HSP 1 Score: 860 bits (2221), Expect = 1.110e-310
Identity = 400/531 (75.33%), Postives = 462/531 (87.01%), Query Frame = 1
Query:    1 LKPTDIGNPNYFHKVVDCQWACPAHTPVPEYIRLIAAGRYADAYMVNWKSNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKGDVSDRMPAPAAKKNGKRIACIGAGPASLTVARDLAPLGYDVTLYDGSARAGGMIRSQIPKFRLPEEVIDEEVGYILNLGVNFKSGVWVNSLKDILAEKYDAVFVGTGAPRGRDLNIPGRKEAAEHIHIGIDWLSSVAFGHIDKIAKRVIVLGGGNTAMDCCRSSKRLGGEEVTVIVRSSFEEMKASPWEKEDAQHEGIPILNFMVPKSFEHENGKLTGMTFETVRAEYDTKGRRNLVPTGEPDKFVAADAVLIAVGQENAFPWIERDIGLEFNEWDMPKLNEETFQSSIPNVFFGGDSALGPKNIIWAVAHGHDAAVSIDKFLHIDDVSERPLPQVSITSQKMGIHEWSYDNDVSNDHRFKVPLKDLKLALANIKVEVELGFDQKLALAEAERCLNCDIQTVFTDKLCIECDACVDICPVDCINFTDNGEEVEVRANL 1593
            ++ TDI  P+YFHKVVDCQWACPAHTPVPEYIRLIAAGR++DAYMVNWKSNVFPGILGRTCDRPCEPACRRGRVE++PVAICRLKRVAADYK D+++R+P PA  KNGKRIA +G GPASLTVARDLAPLGY  T++D    AGGMIR+QIP+FRLPE VIDEE GYIL+LG+ F  G  ++SLK +LAE YDAVFVG+GAPRGR+L+IPGRKEAA +IHIGIDWLSSV+FGHI+KI KRVIVLGGGNTAMDCCRSS+RLGGE+V VIVRS FEEMKASPWEKEDA HE IPILNF+VPK F HENGKLTG+ FE V+AEYD KGRRNLVP+GEPD+ +  D VL+A+GQENAFPWIERDIG+EF++WDMPK++  TF S+ P VFFGGD+A GPKNIIWAVAHGH+AA+SIDK     D+++RP P V I SQKMGIHEWSYDND++ D R++VPL+D  +AL +IK EVELGFD +L L E +RCLNCDIQTVF  KLCIECDACVDICP+DCI FT+NGEE ++RA L
Sbjct:    1 MRNTDIAAPDYFHKVVDCQWACPAHTPVPEYIRLIAAGRFSDAYMVNWKSNVFPGILGRTCDRPCEPACRRGRVEKDPVAICRLKRVAADYKDDITERLPKPAVIKNGKRIALVGGGPASLTVARDLAPLGYSCTIFDQDPTAGGMIRTQIPRFRLPETVIDEECGYILDLGIEFVGGTRIDSLKALLAEGYDAVFVGSGAPRGRELDIPGRKEAAANIHIGIDWLSSVSFGHINKIGKRVIVLGGGNTAMDCCRSSRRLGGEDVKVIVRSGFEEMKASPWEKEDAMHEDIPILNFLVPKEFTHENGKLTGVVFEKVKAEYDAKGRRNLVPSGEPDQHIPCDDVLVAIGQENAFPWIERDIGIEFDKWDMPKVDPTTFASTNPKVFFGGDAAFGPKNIIWAVAHGHEAALSIDKLCQGQDINDRPHPMVEIVSQKMGIHEWSYDNDIALDKRYRVPLRDKVVALRDIKAEVELGFDLELGLKETQRCLNCDIQTVFESKLCIECDACVDICPMDCITFTENGEEADLRARL 531          
BLAST of mRNA_P-wetherbeei_contig13836.1.1 vs. uniprot
Match: A0A1F3ZPG3_9PROT (Glutamate synthase (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17 TaxID=1797484 RepID=A0A1F3ZPG3_9PROT)

HSP 1 Score: 858 bits (2216), Expect = 3.280e-310
Identity = 400/537 (74.49%), Postives = 464/537 (86.41%), Query Frame = 1
Query:    1 LKPTDIGNPNYFHKVVDCQWACPAHTPVPEYIRLIAAGRYADAYMVNWKSNVFPGILGRTCDRPCEPACRRGRVEE------EPVAICRLKRVAADYKGDVSDRMPAPAAKKNGKRIACIGAGPASLTVARDLAPLGYDVTLYDGSARAGGMIRSQIPKFRLPEEVIDEEVGYILNLGVNFKSGVWVNSLKDILAEKYDAVFVGTGAPRGRDLNIPGRKEAAEHIHIGIDWLSSVAFGHIDKIAKRVIVLGGGNTAMDCCRSSKRLGGEEVTVIVRSSFEEMKASPWEKEDAQHEGIPILNFMVPKSFEHENGKLTGMTFETVRAEYDTKGRRNLVPTGEPDKFVAADAVLIAVGQENAFPWIERDIGLEFNEWDMPKLNEETFQSSIPNVFFGGDSALGPKNIIWAVAHGHDAAVSIDKFLHIDDVSERPLPQVSITSQKMGIHEWSYDNDVSNDHRFKVPLKDLKLALANIKVEVELGFDQKLALAEAERCLNCDIQTVFTDKLCIECDACVDICPVDCINFTDNGEEVEVRANL 1593
            +KPTDIG P+YFHKVVDCQWACPAHTPVPEYIRLIAAGRY+DAYM+NW+SNVFPGILGRTCDRPCEPACRR RVEE      EPVAICRLKRVAAD+K D+  R+P PA KKNGK+IAC+GAGPASLTVARDLAPLGY V L+DG  + GGMIR+QIP+FRLPEEVIDEEVGYI  LG+ F++G  ++SLK +LAE +DA+FVG+GAPRGR+L+IPGR+EAA++IHIGIDWLSSV+FGHI+KI KRVIVLGGGNTAMDCCR+S+RLGG++V VIVRS FEEMKASPWEKEDA HEGIPILNF+VPK F H NGKLTG+TFE V+A YD KGRR LVPTGEPD     D VL+AVGQENA+PWIERD+GLEF++WDMP +++ T QS+IP+VFFGGD+A GPKNIIWAVAHGHDAA+SIDK    +DV  RP P V++ SQKMGIHEWSYDN+++ D R+KVP +D K+ L NIKVEVELGFD KL   EA+RCLNCD+QTVFT K CIECDACVDICP+DCI FT + EE ++R  L
Sbjct:    1 MKPTDIGAPDYFHKVVDCQWACPAHTPVPEYIRLIAAGRYSDAYMINWESNVFPGILGRTCDRPCEPACRRARVEENNGEEAEPVAICRLKRVAADFKDDIRPRLPKPATKKNGKKIACVGAGPASLTVARDLAPLGYHVVLFDGDKKMGGMIRTQIPRFRLPEEVIDEEVGYIAGLGIEFRAGKRIDSLKGLLAEGFDAIFVGSGAPRGRELDIPGRREAAKNIHIGIDWLSSVSFGHIEKIGKRVIVLGGGNTAMDCCRTSRRLGGDDVKVIVRSGFEEMKASPWEKEDALHEGIPILNFLVPKEFTHRNGKLTGVTFEKVKALYDDKGRRKLVPTGEPDPHYECDDVLVAVGQENAYPWIERDVGLEFDKWDMPVVDKTTMQSTIPHVFFGGDAAFGPKNIIWAVAHGHDAAISIDKLCSGEDVRNRPAPLVNLMSQKMGIHEWSYDNEIAPDERYKVPHQDAKITLKNIKVEVELGFDLKLGFKEAQRCLNCDVQTVFTAKQCIECDACVDICPMDCITFTADAEEKDLRTRL 537          
BLAST of mRNA_P-wetherbeei_contig13836.1.1 vs. uniprot
Match: A0A0S8C3L7_9PROT (Glutamate synthase n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8C3L7_9PROT)

HSP 1 Score: 858 bits (2217), Expect = 5.610e-310
Identity = 403/537 (75.05%), Postives = 461/537 (85.85%), Query Frame = 1
Query:    1 LKPTDIGNPNYFHKVVDCQWACPAHTPVPEYIRLIAAGRYADAYMVNWKSNVFPGILGRTCDRPCEPACRRGRVEE------EPVAICRLKRVAADYKGDVSDRMPAPAAKKNGKRIACIGAGPASLTVARDLAPLGYDVTLYDGSARAGGMIRSQIPKFRLPEEVIDEEVGYILNLGVNFKSGVWVNSLKDILAEKYDAVFVGTGAPRGRDLNIPGRKEAAEHIHIGIDWLSSVAFGHIDKIAKRVIVLGGGNTAMDCCRSSKRLGGEEVTVIVRSSFEEMKASPWEKEDAQHEGIPILNFMVPKSFEHENGKLTGMTFETVRAEYDTKGRRNLVPTGEPDKFVAADAVLIAVGQENAFPWIERDIGLEFNEWDMPKLNEETFQSSIPNVFFGGDSALGPKNIIWAVAHGHDAAVSIDKFLHIDDVSERPLPQVSITSQKMGIHEWSYDNDVSNDHRFKVPLKDLKLALANIKVEVELGFDQKLALAEAERCLNCDIQTVFTDKLCIECDACVDICPVDCINFTDNGEEVEVRANL 1593
            +KPTDIG P+YFHKVVDCQWACPAHTPVPEYIRLIAAGRY DAYMVNW SNVFPGILGRTCDRPCEPACRRGRVEE      EPVAICRLKRVAADYK D+  R+P     KNG+R+AC+GAGPASLTVARDLAPLGY VT++D   RAGGMI SQIP+FRLP EVIDEEV YIL L V F+ G  ++SLK ++AE YDA+F+G GAPRGRDL++PGR+EAA +IH+GIDWLSSV+FGH+  I KRVIVLGGGNTAMDCCR+S+RLGG++V VIVRS FEEMKASPWEKEDA HEGIPILN++VPK+F HENG+LTGMTFE VRAEYD KGRR L+PTGEPD+    D VL+AVGQENAFPWIERD G+EF++W MP +++ T QS++PNVFFGGD+A GPKNIIWAVAHGHDAAVSIDK L+ +DV ERP P VS+ SQKMGIHEWSYDNDVS  +R++VP +D KL L +IKVEVELGFDQK   AEA+RCLNCD+QTVFT KLCIECDACVDICP+DCI FT+N EE ++R  L
Sbjct:    1 MKPTDIGVPDYFHKVVDCQWACPAHTPVPEYIRLIAAGRYGDAYMVNWWSNVFPGILGRTCDRPCEPACRRGRVEERNTEKAEPVAICRLKRVAADYKEDIRGRLPKAPKHKNGRRVACVGAGPASLTVARDLAPLGYKVTVFDQDPRAGGMIWSQIPRFRLPMEVIDEEVDYILGLDVEFRGGTRIDSLKQLMAEGYDAIFIGCGAPRGRDLDVPGRQEAAANIHVGIDWLSSVSFGHVASIGKRVIVLGGGNTAMDCCRTSRRLGGDDVKVIVRSGFEEMKASPWEKEDAMHEGIPILNYLVPKAFIHENGRLTGMTFEKVRAEYDAKGRRKLIPTGEPDQHFECDDVLVAVGQENAFPWIERDAGIEFDQWGMPVVDKATLQSTVPNVFFGGDAAFGPKNIIWAVAHGHDAAVSIDKLLNGEDVHERPAPGVSLVSQKMGIHEWSYDNDVSLANRYQVPWRDQKLTLKDIKVEVELGFDQKSGFAEAQRCLNCDVQTVFTGKLCIECDACVDICPMDCITFTENAEEADLRKRL 537          
BLAST of mRNA_P-wetherbeei_contig13836.1.1 vs. uniprot
Match: A0A160UDX6_BRASZ (Glutamate synthase NADPH small chain EC 14113 n=211 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A160UDX6_BRASZ)

HSP 1 Score: 857 bits (2215), Expect = 8.740e-310
Identity = 397/531 (74.76%), Postives = 466/531 (87.76%), Query Frame = 1
Query:    1 LKPTDIGNPNYFHKVVDCQWACPAHTPVPEYIRLIAAGRYADAYMVNWKSNVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKGDVSDRMPAPAAKKNGKRIACIGAGPASLTVARDLAPLGYDVTLYDGSARAGGMIRSQIPKFRLPEEVIDEEVGYILNLGVNFKSGVWVNSLKDILAEKYDAVFVGTGAPRGRDLNIPGRKEAAEHIHIGIDWLSSVAFGHIDKIAKRVIVLGGGNTAMDCCRSSKRLGGEEVTVIVRSSFEEMKASPWEKEDAQHEGIPILNFMVPKSFEHENGKLTGMTFETVRAEYDTKGRRNLVPTGEPDKFVAADAVLIAVGQENAFPWIERDIGLEFNEWDMPKLNEETFQSSIPNVFFGGDSALGPKNIIWAVAHGHDAAVSIDKFLHIDDVSERPLPQVSITSQKMGIHEWSYDNDVSNDHRFKVPLKDLKLALANIKVEVELGFDQKLALAEAERCLNCDIQTVFTDKLCIECDACVDICPVDCINFTDNGEEVEVRANL 1593
            +KPTDI  P+YFHKVVDCQWACPAHTPVPEYIRLIA GRY+DAYM+NWKSNVFPGILGRTCDRPCEPACRRGRVEE PVAICRLKRVAAD+K D++ R+P P+AK NGKR+A +G GPASLTVARDLAPLGY  T++D   +AGGM+RSQIPKFRLP+ VIDEE GYILNLGV+FK G  + S+K +LAEKYDA+FVG+GAPRGR+L+IPGRKEAA ++HIGIDWLSSV+FGH DKI KRVIVLGGGNTAMDCCR+++RLGGEEV V+VRS F+EMKASPWEKEDA HE IPILNF+VP +F H+NGKLTG+TF+ V+AEYD KGRRNLVP+GEPD+ +  D VL+AVGQENAFPWIE+D G+EF++W MPK++ +TF S+ P VFFGGD+A GPKNIIWAVA GHDAA+SI K L  +DV+ERPLP+V I+SQKMGIHEWSYDND+SND R+KVP +D  +AL +I+ EVELG+D KLAL EA RCLNCD+QTVF+  LCIECDACVDICP+DCI FT+NGEE ++R  L
Sbjct:    1 MKPTDIAAPDYFHKVVDCQWACPAHTPVPEYIRLIAQGRYSDAYMINWKSNVFPGILGRTCDRPCEPACRRGRVEETPVAICRLKRVAADFKDDITQRLPRPSAK-NGKRVAFVGGGPASLTVARDLAPLGYHCTVFDADPQAGGMMRSQIPKFRLPDSVIDEETGYILNLGVDFKGGHRIESMKALLAEKYDAIFVGSGAPRGRELDIPGRKEAAANVHIGIDWLSSVSFGHTDKIGKRVIVLGGGNTAMDCCRTARRLGGEEVKVVVRSGFDEMKASPWEKEDALHEDIPILNFLVPTAFVHDNGKLTGITFQKVKAEYDAKGRRNLVPSGEPDQTIECDDVLVAVGQENAFPWIEQDCGIEFDKWHMPKVDPQTFVSTNPKVFFGGDAAFGPKNIIWAVAQGHDAALSIHKMLSGEDVTERPLPEVHISSQKMGIHEWSYDNDISNDKRYKVPHRDKVIALKDIRTEVELGYDVKLALGEAHRCLNCDVQTVFSTSLCIECDACVDICPMDCITFTENGEEADLRQRL 530          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13836.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DBM9_9GAMM0.000e+076.33Glutamate synthase n=1 Tax=Gammaproteobacteria bac... [more]
A0A523PEQ1_9PROT2.650e-31477.274Fe-4S dicluster domain-containing protein n=1 Tax... [more]
A0A1W6ZVP4_9HYPH1.650e-31275.71Glutamate synthase n=1 Tax=Pseudorhodoplanes sinus... [more]
A0A257PV16_9PROT3.930e-31277.02Glutamate synthase n=1 Tax=Rhodospirillales bacter... [more]
UPI00131D98B81.120e-31176.46FAD-dependent oxidoreductase n=1 Tax=Acidisphaera ... [more]
A0A536YKP8_9PROT9.740e-31176.914Fe-4S dicluster domain-containing protein n=3 Tax... [more]
A0A6N7GQF9_9HYPH1.110e-31075.334Fe-4S dicluster domain-containing protein n=1 Tax... [more]
A0A1F3ZPG3_9PROT3.280e-31074.49Glutamate synthase (Fragment) n=1 Tax=Betaproteoba... [more]
A0A0S8C3L7_9PROT5.610e-31075.05Glutamate synthase n=1 Tax=Betaproteobacteria bact... [more]
A0A160UDX6_BRASZ8.740e-31074.76Glutamate synthase NADPH small chain EC 14113 n=21... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13836contigP-wetherbeei_contig13836:195..1787 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog319003.Bra1253DRAFT_03240
Preferred nameMA20_01050
PFAMsFer4_20,Fer4_7,NADH_4Fe-4S,Pyr_redox_2,Pyr_redox_3
Model size1593
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC02796
KEGG koko:K15022
KEGG ReactionR00134
KEGG Pathwayko00680,ko00720,ko01120,ko01200,map00680,map00720,map01120,map01200
KEGG ModuleM00377
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.51e-312
EggNOG OGsCOG0493@1|root,COG1143@1|root,COG0493@2|Bacteria,COG1143@2|Bacteria,1MU2H@1224|Proteobacteria,2TQK5@28211|Alphaproteobacteria,3JSD0@41294|Bradyrhizobiaceae
EC1.17.1.10
DescriptionDihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
Cds size1593
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185998.880117-CDS-P-wetherbeei_contig13836:194..17871683185998.880117-CDS-P-wetherbeei_contig13836:194..1787Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13836 195..1787 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13836.1.1prot_P-wetherbeei_contig13836.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13836 195..1787 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13836.1.1

>prot_P-wetherbeei_contig13836.1.1 ID=prot_P-wetherbeei_contig13836.1.1|Name=mRNA_P-wetherbeei_contig13836.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=531bp
LKPTDIGNPNYFHKVVDCQWACPAHTPVPEYIRLIAAGRYADAYMVNWKS
NVFPGILGRTCDRPCEPACRRGRVEEEPVAICRLKRVAADYKGDVSDRMP
APAAKKNGKRIACIGAGPASLTVARDLAPLGYDVTLYDGSARAGGMIRSQ
IPKFRLPEEVIDEEVGYILNLGVNFKSGVWVNSLKDILAEKYDAVFVGTG
APRGRDLNIPGRKEAAEHIHIGIDWLSSVAFGHIDKIAKRVIVLGGGNTA
MDCCRSSKRLGGEEVTVIVRSSFEEMKASPWEKEDAQHEGIPILNFMVPK
SFEHENGKLTGMTFETVRAEYDTKGRRNLVPTGEPDKFVAADAVLIAVGQ
ENAFPWIERDIGLEFNEWDMPKLNEETFQSSIPNVFFGGDSALGPKNIIW
AVAHGHDAAVSIDKFLHIDDVSERPLPQVSITSQKMGIHEWSYDNDVSND
HRFKVPLKDLKLALANIKVEVELGFDQKLALAEAERCLNCDIQTVFTDKL
CIECDACVDICPVDCINFTDNGEEVEVRANL
back to top

mRNA from alignment at P-wetherbeei_contig13836:195..1787+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13836.1.1 ID=mRNA_P-wetherbeei_contig13836.1.1|Name=mRNA_P-wetherbeei_contig13836.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1593bp|location=Sequence derived from alignment at P-wetherbeei_contig13836:195..1787+ (Phaeothamnion wetherbeei SAG_119_79)
TTGAAGCCCACAGATATCGGTAATCCCAACTACTTTCACAAAGTCGTTGA CTGTCAGTGGGCCTGTCCGGCTCATACCCCCGTCCCCGAATACATTCGCT TGATCGCGGCCGGGCGCTACGCCGATGCCTACATGGTCAACTGGAAATCG AACGTGTTTCCCGGGATCCTGGGCCGCACCTGTGACAGACCCTGCGAACC GGCGTGCCGGCGTGGCCGTGTCGAAGAAGAACCAGTAGCGATCTGCCGTC TCAAGCGTGTCGCCGCCGACTACAAGGGCGATGTCAGCGACCGCATGCCC GCCCCGGCCGCCAAGAAGAATGGCAAGCGCATCGCCTGTATCGGTGCCGG TCCGGCCTCGCTGACGGTCGCGCGCGACTTGGCGCCACTCGGCTACGACG TCACCCTCTACGACGGGTCGGCGCGCGCCGGCGGCATGATCCGCAGTCAG ATCCCCAAATTCCGCCTGCCCGAAGAAGTGATCGACGAAGAGGTCGGTTA CATCCTGAACTTAGGTGTCAATTTCAAGAGTGGCGTGTGGGTCAACTCGC TGAAGGACATCCTGGCCGAGAAATACGATGCGGTGTTCGTCGGTACCGGC GCACCGCGCGGTCGCGACCTCAACATTCCGGGTCGCAAGGAAGCAGCCGA GCACATTCATATCGGTATCGATTGGCTGTCGTCAGTAGCTTTCGGTCATA TCGACAAGATCGCCAAGCGCGTCATCGTGCTCGGTGGTGGTAATACCGCG ATGGACTGCTGCCGTTCCTCCAAGCGCCTCGGTGGTGAGGAAGTGACGGT CATCGTGCGTTCCAGTTTCGAAGAGATGAAGGCTTCGCCGTGGGAAAAGG AGGATGCCCAACATGAAGGCATTCCGATTCTCAACTTCATGGTGCCCAAG AGCTTTGAGCACGAGAATGGCAAGCTGACCGGCATGACCTTCGAGACCGT GCGCGCCGAGTACGACACCAAGGGACGGCGCAATCTGGTGCCTACCGGCG AGCCCGACAAGTTCGTGGCGGCGGACGCAGTGCTGATAGCGGTCGGCCAG GAGAACGCCTTCCCCTGGATCGAACGCGATATCGGTCTTGAGTTCAACGA ATGGGACATGCCCAAGCTCAACGAAGAGACTTTCCAATCGAGCATTCCCA ATGTGTTCTTCGGCGGCGACTCCGCGCTCGGCCCCAAGAACATCATCTGG GCGGTTGCCCATGGTCACGACGCGGCGGTCTCTATCGACAAGTTTCTGCA CATCGATGATGTGTCCGAGCGACCACTGCCGCAGGTCTCCATTACCTCGC AGAAGATGGGCATTCACGAGTGGAGCTATGACAACGATGTGTCCAACGAC CATCGTTTCAAAGTGCCGCTGAAAGATCTCAAGCTCGCGCTGGCCAATAT CAAGGTCGAGGTTGAACTCGGCTTCGATCAGAAACTGGCCCTGGCCGAAG CCGAGCGCTGCCTGAACTGCGATATACAGACGGTCTTTACCGACAAGCTG TGCATCGAATGCGATGCCTGCGTCGATATCTGCCCGGTCGATTGCATCAA CTTCACCGACAACGGCGAAGAAGTGGAAGTCCGCGCCAACTTG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig13836:195..1787+

>mRNA_P-wetherbeei_contig13836.1.1 ID=mRNA_P-wetherbeei_contig13836.1.1|Name=mRNA_P-wetherbeei_contig13836.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1593bp|location=Sequence derived from alignment at P-wetherbeei_contig13836:195..1787+ (Phaeothamnion wetherbeei SAG_119_79)
TTGAAGCCCACAGATATCGGTAATCCCAACTACTTTCACAAAGTCGTTGA
CTGTCAGTGGGCCTGTCCGGCTCATACCCCCGTCCCCGAATACATTCGCT
TGATCGCGGCCGGGCGCTACGCCGATGCCTACATGGTCAACTGGAAATCG
AACGTGTTTCCCGGGATCCTGGGCCGCACCTGTGACAGACCCTGCGAACC
GGCGTGCCGGCGTGGCCGTGTCGAAGAAGAACCAGTAGCGATCTGCCGTC
TCAAGCGTGTCGCCGCCGACTACAAGGGCGATGTCAGCGACCGCATGCCC
GCCCCGGCCGCCAAGAAGAATGGCAAGCGCATCGCCTGTATCGGTGCCGG
TCCGGCCTCGCTGACGGTCGCGCGCGACTTGGCGCCACTCGGCTACGACG
TCACCCTCTACGACGGGTCGGCGCGCGCCGGCGGCATGATCCGCAGTCAG
ATCCCCAAATTCCGCCTGCCCGAAGAAGTGATCGACGAAGAGGTCGGTTA
CATCCTGAACTTAGGTGTCAATTTCAAGAGTGGCGTGTGGGTCAACTCGC
TGAAGGACATCCTGGCCGAGAAATACGATGCGGTGTTCGTCGGTACCGGC
GCACCGCGCGGTCGCGACCTCAACATTCCGGGTCGCAAGGAAGCAGCCGA
GCACATTCATATCGGTATCGATTGGCTGTCGTCAGTAGCTTTCGGTCATA
TCGACAAGATCGCCAAGCGCGTCATCGTGCTCGGTGGTGGTAATACCGCG
ATGGACTGCTGCCGTTCCTCCAAGCGCCTCGGTGGTGAGGAAGTGACGGT
CATCGTGCGTTCCAGTTTCGAAGAGATGAAGGCTTCGCCGTGGGAAAAGG
AGGATGCCCAACATGAAGGCATTCCGATTCTCAACTTCATGGTGCCCAAG
AGCTTTGAGCACGAGAATGGCAAGCTGACCGGCATGACCTTCGAGACCGT
GCGCGCCGAGTACGACACCAAGGGACGGCGCAATCTGGTGCCTACCGGCG
AGCCCGACAAGTTCGTGGCGGCGGACGCAGTGCTGATAGCGGTCGGCCAG
GAGAACGCCTTCCCCTGGATCGAACGCGATATCGGTCTTGAGTTCAACGA
ATGGGACATGCCCAAGCTCAACGAAGAGACTTTCCAATCGAGCATTCCCA
ATGTGTTCTTCGGCGGCGACTCCGCGCTCGGCCCCAAGAACATCATCTGG
GCGGTTGCCCATGGTCACGACGCGGCGGTCTCTATCGACAAGTTTCTGCA
CATCGATGATGTGTCCGAGCGACCACTGCCGCAGGTCTCCATTACCTCGC
AGAAGATGGGCATTCACGAGTGGAGCTATGACAACGATGTGTCCAACGAC
CATCGTTTCAAAGTGCCGCTGAAAGATCTCAAGCTCGCGCTGGCCAATAT
CAAGGTCGAGGTTGAACTCGGCTTCGATCAGAAACTGGCCCTGGCCGAAG
CCGAGCGCTGCCTGAACTGCGATATACAGACGGTCTTTACCGACAAGCTG
TGCATCGAATGCGATGCCTGCGTCGATATCTGCCCGGTCGATTGCATCAA
CTTCACCGACAACGGCGAAGAAGTGGAAGTCCGCGCCAACTTG
back to top