mRNA_P-wetherbeei_contig13787.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13787.1.1 vs. uniprot
Match: A0A835ZHZ2_9STRA (Flagellar outer arm dynein 14 kDa light chain LC5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHZ2_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.140e-56 Identity = 106/159 (66.67%), Postives = 126/159 (79.25%), Query Frame = 1
Query: 1 MRLVV-ALVALCVHCASAFLAPGGVAAG--LARASTGAGRTRARPSATAPRMAVLDVGSEEDLDKALMSAGSSLVVVDYSTTWCGPCKVIFPKYEALSEQYKDAIFLKVMGDSSPAATKLMKREGVRSVPSFHFWKTGKKVDQVNGANADALESTLREH 468
MRL+V ALVALC+ A AF G AG L R+S+ S++A RMAV++V SEE LDK + +AGS LVVVDYSTTWCGPCKVIFPKYE LS +Y +A+FLKV+GDSS AATKLMKREGVRSVPSFHFWK GKKVDQVNGAN++ALE+T+R++
Sbjct: 1 MRLLVSALVALCLGSACAFT---GSFAGTSLCRSSSSV------RSSSALRMAVIEVDSEEALDKTIAAAGSGLVVVDYSTTWCGPCKVIFPKYEELSNKYTNAVFLKVIGDSSQAATKLMKREGVRSVPSFHFWKDGKKVDQVNGANSEALETTIRDY 150
BLAST of mRNA_P-wetherbeei_contig13787.1.1 vs. uniprot
Match: A0A7S4NJD6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NJD6_GUITH) HSP 1 Score: 168 bits (425), Expect = 2.550e-49 Identity = 76/121 (62.81%), Postives = 105/121 (86.78%), Query Frame = 1
Query: 112 TRARPSATAPRMAVLDVGSEEDLDKALMSAG-SSLVVVDYSTTWCGPCKVIFPKYEALSEQYKDAIFLKVMGDSSPAATKLMKREGVRSVPSFHFWKTGKKVDQVNGANADALESTLREHV 471
+R R SA A RMAV+D+ SE++LD+A+ +AG ++LV++DYSTTWCGPCKVI PKY+ +S++YKDAIFLK +GD+SP ATKLMKREG+RSVP+FHFWK G K++ + GAN +ALE+T++E++
Sbjct: 48 SRPRRSAAALRMAVIDINSEQELDQAIEAAGENTLVIIDYSTTWCGPCKVIAPKYDEMSDKYKDAIFLKCVGDTSPEATKLMKREGIRSVPAFHFWKKGAKIEVIAGANVEALENTIKENL 168
BLAST of mRNA_P-wetherbeei_contig13787.1.1 vs. uniprot
Match: A0A6H5K2L8_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L8_9PHAE) HSP 1 Score: 162 bits (411), Expect = 2.750e-47 Identity = 87/157 (55.41%), Postives = 109/157 (69.43%), Query Frame = 1
Query: 1 MRLVVALVALCVHCASAFLAPGGV--AAGLARASTGAGRTRARPSATAPRMAVLDVGSEEDLDKALMSAGSSLVVVDYSTTWCGPCKVIFPKYEALSEQYKDAIFLKVMGDSSPAATKLMKREGVRSVPSFHFWKTGKKVDQVNGANADALESTLRE 465
MR VVA + + AF++P A G +RA A A + P M V+D+GS +LDK LVVVDYSTTWCGPCK+I PK+E L+EQY DA+F+KV+GDS+ A++LMKREGVRSVPSFHFWK GKKV++VNGAN +ALE TLR+
Sbjct: 4 MRAVVAAALVLLGLVDAFVSPSAFVRATGSSRACASATARAAGAMRSRPTMKVIDIGSFAELDKLTSDNKDKLVVVDYSTTWCGPCKMILPKFEKLAEQYSDAVFVKVIGDSTNDASQLMKREGVRSVPSFHFWKDGKKVEKVNGANEEALEQTLRD 160
BLAST of mRNA_P-wetherbeei_contig13787.1.1 vs. uniprot
Match: B7G0P5_PHATC (Thioredoxin f n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0P5_PHATC) HSP 1 Score: 163 bits (412), Expect = 2.820e-47 Identity = 75/107 (70.09%), Postives = 93/107 (86.92%), Query Frame = 1
Query: 148 AVLDVGSEEDLDKALMSAGSSLVVVDYSTTWCGPCKVIFPKYEALSEQYKDAIFLKVMGDSSPAATKLMKREGVRSVPSFHFWKTGKKVDQVNGANADALESTLREH 468
AV+D+GSE D+ + SAG SLVVVDYSTTWCGPCKVI PK+E LSE+Y DA+FLKV+GD+SP A+KLMKREGVRSVPSFH++K G+KVD VNGANA+A+E+ + +H
Sbjct: 64 AVVDIGSESAFDQTIASAGGSLVVVDYSTTWCGPCKVIAPKFEELSEKYGDAVFLKVIGDASPDASKLMKREGVRSVPSFHYFKNGEKVDVVNGANAEAIEAAIAKH 170
BLAST of mRNA_P-wetherbeei_contig13787.1.1 vs. uniprot
Match: A0A6S9BEG3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9BEG3_9STRA) HSP 1 Score: 161 bits (408), Expect = 5.550e-47 Identity = 74/109 (67.89%), Postives = 94/109 (86.24%), Query Frame = 1
Query: 145 MAVLDVGSEEDLDKALMSAGSSLVVVDYSTTWCGPCKVIFPKYEALSEQYKDAIFLKVMGDSSPAATKLMKREGVRSVPSFHFWKTGKKVDQVNGANADALESTLREHV 471
MAV+D+ SE DK + SAG SLVVVDYSTTWCGPCKVI PK++ LSEQY DA+F+KV+GD+SP A+KLMKREGVRSVPSFH++K G+KV+ VNGANA+A+E+ + +H+
Sbjct: 43 MAVVDIDSEAKFDKTIESAGDSLVVVDYSTTWCGPCKVIAPKFDELSEQYSDAVFVKVIGDASPDASKLMKREGVRSVPSFHYFKGGEKVEVVNGANAEAIEAAITKHL 151
BLAST of mRNA_P-wetherbeei_contig13787.1.1 vs. uniprot
Match: A0A7S2IGF8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGF8_9STRA) HSP 1 Score: 160 bits (406), Expect = 9.520e-47 Identity = 74/108 (68.52%), Postives = 93/108 (86.11%), Query Frame = 1
Query: 148 AVLDVGSEEDLDKALMSAGSSLVVVDYSTTWCGPCKVIFPKYEALSEQYKDAIFLKVMGDSSPAATKLMKREGVRSVPSFHFWKTGKKVDQVNGANADALESTLREHV 471
AV+D+ SEE DK + SA SLVVVDYSTTWCGPCKVI PK++ LS+QY DA+FLKV+GD+SP A+KLMKREGVRSVPSFH++K G+KV+ VNGANA+A+ES + +H+
Sbjct: 39 AVVDIDSEEKFDKTIESASGSLVVVDYSTTWCGPCKVIAPKFDELSDQYPDAVFLKVIGDASPDASKLMKREGVRSVPSFHYFKDGEKVEVVNGANAEAIESAITKHL 146
BLAST of mRNA_P-wetherbeei_contig13787.1.1 vs. uniprot
Match: B8BVB7_THAPS (Thioredoxin f n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVB7_THAPS) HSP 1 Score: 160 bits (405), Expect = 1.270e-46 Identity = 79/131 (60.31%), Postives = 101/131 (77.10%), Query Frame = 1
Query: 85 ARASTGAGRTRARPSATA---PRMAVLDVGSEEDLDKALMSAGSSLVVVDYSTTWCGPCKVIFPKYEALSEQYKDAIFLKVMGDSSPAATKLMKREGVRSVPSFHFWKTGKKVDQVNGANADALESTLREH 468
A AST A + P TA P MAV+DV SE + D + AG LVV+DYSTTWCGPCKVI PK++ LS+QY D++F+KV+GD+SP A+KLMKREGVRSVPSFH++K G KVD VNGANA+A+E+ +++H
Sbjct: 13 AAASTHAFAPTSLPLRTAISQPLMAVVDVNSEAEFDAKVSGAGDKLVVIDYSTTWCGPCKVIAPKFDELSDQYPDSVFIKVIGDASPDASKLMKREGVRSVPSFHYFKNGSKVDVVNGANAEAIEAAIKKH 143
BLAST of mRNA_P-wetherbeei_contig13787.1.1 vs. uniprot
Match: L1ICS3_GUITC (Thioredoxin domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1ICS3_GUITC) HSP 1 Score: 159 bits (402), Expect = 1.410e-46 Identity = 70/114 (61.40%), Postives = 98/114 (85.96%), Query Frame = 1
Query: 145 MAVLDVGSEEDLDKALMSAG-----SSLVVVDYSTTWCGPCKVIFPKYEALSEQYKDAIFLKVMGDSSPAATKLMKREGVRSVPSFHFWKTGKKVDQVNGANADALESTLREHV 471
MAV+D+ SE++LD+A+ +AG ++LV++DYSTTWCGPCKVI PKY+ +S++YKDAIFLK +GD+SP ATKLMKREG+RSVP+FHFWK G K++ + GAN +ALE+T++E++
Sbjct: 1 MAVIDINSEQELDQAIEAAGWLAGENTLVIIDYSTTWCGPCKVIAPKYDEMSDKYKDAIFLKCVGDTSPEATKLMKREGIRSVPAFHFWKKGAKIEVIAGANVEALENTIKENL 114
BLAST of mRNA_P-wetherbeei_contig13787.1.1 vs. uniprot
Match: A0A448ZK24_9STRA (Thioredoxin domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK24_9STRA) HSP 1 Score: 159 bits (403), Expect = 2.880e-46 Identity = 75/120 (62.50%), Postives = 94/120 (78.33%), Query Frame = 1
Query: 112 TRARPSATAPRMAVLDVGSEEDLDKALMSAGSSLVVVDYSTTWCGPCKVIFPKYEALSEQYKDAIFLKVMGDSSPAATKLMKREGVRSVPSFHFWKTGKKVDQVNGANADALESTLREHV 471
TR P MAV+D+ E DK + S+G SLVVVDYSTTWCGPCKVI PK+ SE+Y DA+FLKV+GD+SP A+KLMKREGVRSVPSFH++K G+KVD VNGANA+A+E+ + +H+
Sbjct: 29 TRQSSCPNTPLMAVVDINGEAAFDKTISSSGDSLVVVDYSTTWCGPCKVIAPKFAEFSEKYPDAVFLKVVGDASPDASKLMKREGVRSVPSFHYFKDGEKVDVVNGANAEAIEAGITKHL 148
BLAST of mRNA_P-wetherbeei_contig13787.1.1 vs. uniprot
Match: A0A1E7EMD4_9STRA (Thioredoxin f n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EMD4_9STRA) HSP 1 Score: 159 bits (403), Expect = 3.260e-46 Identity = 78/131 (59.54%), Postives = 101/131 (77.10%), Query Frame = 1
Query: 82 LARASTGAGRTRARPSATAPRMAVLDVGSEEDLDKALMSAGSSLVVVDYSTTWCGPCKVIFPKYEALSEQYKDAIFLKVMGDSSPAATKLMKREGVRSVPSFHFWKTGKKVDQVNGANADALESTLREHVS 474
+A + TGA TR + P MAV+D+ E DK + SA +V+VDYSTTWCGPCKVI PK++ LSE+Y D +FLKV+GD+SP A+KLMKREGVRSVPSFH++K G+KVD VNGANA+A+E+ L +H+S
Sbjct: 24 IAFSPTGASVTRQQ--CLTPLMAVVDIDGETPFDKTIKSANGGVVIVDYSTTWCGPCKVIAPKFDELSEKYPDVVFLKVIGDASPDASKLMKREGVRSVPSFHYFKDGEKVDVVNGANAEAIEACLTKHLS 152 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13787.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13787.1.1 >prot_P-wetherbeei_contig13787.1.1 ID=prot_P-wetherbeei_contig13787.1.1|Name=mRNA_P-wetherbeei_contig13787.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=159bp MRLVVALVALCVHCASAFLAPGGVAAGLARASTGAGRTRARPSATAPRMAback to top mRNA from alignment at P-wetherbeei_contig13787:490..1186+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13787.1.1 ID=mRNA_P-wetherbeei_contig13787.1.1|Name=mRNA_P-wetherbeei_contig13787.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=697bp|location=Sequence derived from alignment at P-wetherbeei_contig13787:490..1186+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13787:490..1186+ >mRNA_P-wetherbeei_contig13787.1.1 ID=mRNA_P-wetherbeei_contig13787.1.1|Name=mRNA_P-wetherbeei_contig13787.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig13787:490..1186+ (Phaeothamnion wetherbeei SAG_119_79)back to top |