mRNA_P-wetherbeei_contig13786.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13786.1.1
Unique NamemRNA_P-wetherbeei_contig13786.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13786.1.1 vs. uniprot
Match: Q8QNK7_ESV1K (EsV-1-64 n=2 Tax=root TaxID=1 RepID=Q8QNK7_ESV1K)

HSP 1 Score: 160 bits (405), Expect = 2.450e-46
Identity = 89/191 (46.60%), Postives = 125/191 (65.45%), Query Frame = 1
Query:   16 HPNVTRLINAPRIQQRTDEWMEFRRIRLTASDASKVLAKGGKSRTSLFLEKVGDKEPFSGNDATTSGTRNEENALNQYKNMYPGAVIFDNLTIMVHDTHDELAASLDAVTADGINLELKTIHGIKLKSIPKAYRDQVQLQMEVCNLETTHLVQYYIDLEQTVFTV--IGRDREWFETNRDSFLSFVHEVRE 582
            H ++ R+++ PRI QRT EW E+R+ R+TAS+AS ++A+G K    +F +KVG ++    ++  T GT NEE  +  Y+  +P   +F +L+I+ H T D +AASLDA TA GIN+E+KT+   K+  + K Y DQVQLQMEV +LE THLVQ+YI +      V  I RDR WFE NR  F  FV +VR+
Sbjct:    2 HSSIKRILDYPRIAQRTPEWYEYRKKRVTASEASTIIAQG-KGYDRIFEQKVGIRDSNISSEYMTIGTDNEEAVVALYREKFPEEEVFHDLSIIPHPTLDFVAASLDACTASGINVEIKTVFKEKVIKVSKMYYDQVQLQMEVSDLEKTHLVQHYIRMPNQPIVVHEIFRDRGWFERNRGIFKGFVEKVRD 191          
BLAST of mRNA_P-wetherbeei_contig13786.1.1 vs. uniprot
Match: B5LWE1_9PHYC (Putative exonuclease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE1_9PHYC)

HSP 1 Score: 147 bits (370), Expect = 5.530e-41
Identity = 82/191 (42.93%), Postives = 120/191 (62.83%), Query Frame = 1
Query:   16 HPNVTRLINAPRIQQRTDEWMEFRRIRLTASDASKVLAKGGKSRTSLFLEKVGDKEPFSGNDATTSGTRNEENALNQYKNMYPGAVIFDNLTIMVHDTHDELAASLDAVTADGINLELKTIHGIK-LKSIPKAYRDQVQLQMEVCNLETTHLVQYYIDL--EQTVFTVIGRDREWFETNRDSFLSFVHEVR 579
            HP+V  +++ PRI+QRT EW  FRR  +TAS+ S V+A+G  +R+ L  +K          + T  G+ NE   + +Y+ ++PG V+  +L+I  H   D +AASLDA T  GIN+E+KT    + + +IPK+YRDQVQLQMEV +L+ THLV  YI++  +  V   I RDR+WF+ +      FVHE+R
Sbjct:    5 HPSVLSILSGPRIEQRTPEWFAFRRSHVTASEVSTVIAQGKGARSLLHRKKFQAVSSNFSTEFTDRGSANEGTVVEKYRELFPGVVVHHDLSITRHRDLDFVAASLDACTNTGINVEIKTSFKPRPVTTIPKSYRDQVQLQMEVADLDLTHLVYQYINIPGQPVVVHQIPRDRDWFQKHVAILRDFVHELR 195          
BLAST of mRNA_P-wetherbeei_contig13786.1.1 vs. uniprot
Match: Q6XLZ3_9PHYC (FirrV-1-B43 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLZ3_9PHYC)

HSP 1 Score: 142 bits (357), Expect = 1.480e-38
Identity = 84/193 (43.52%), Postives = 118/193 (61.14%), Query Frame = 1
Query:   16 HPNVTRLINAPRIQQRTDEWMEFRRIRLTASDASKVLAKGGKSRTSLFLEKVG--DKEPFSGNDATTSGTRNEENALNQYKNMYPGAVIFDNLTIMVHDTHDELAASLDAVTADGINLELKT-IHGIKLKSIPKAYRDQVQLQMEVCNLETTHLVQYYIDL--EQTVFTVIGRDREWFETNRDSFLSFVHEVR 579
            HP+V  ++ +P+I QR+ EW  FR+  +TAS+AS V+A+G   RT +  +K    +   FS N+ T  G  NE   + +Y+ MYP  ++ D L I+ H   D LAASLDA T  GIN+E+KT     ++ SIPKAY DQVQLQMEV NL+ THLV  YI+L  +  +   + R+ +WF  +   F  FV E+R
Sbjct:    6 HPSVLLILASPQIIQRSPEWFAFRKAHVTASEASIVIAQGKGLRTLMNRKKYQAVNGSSFS-NEFTKIGAENESKIVEKYRLMYPDVIVHDQLPIIKHQRFDFLAASLDACTNTGINVEMKTSFKTTRIHSIPKAYYDQVQLQMEVANLDMTHLVYQYINLPDQPVIVHEVHRNTDWFSEHLHKFRIFVEELR 197          
BLAST of mRNA_P-wetherbeei_contig13786.1.1 vs. uniprot
Match: A0A6C0I9L0_9ZZZZ (YqaJ domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0I9L0_9ZZZZ)

HSP 1 Score: 98.6 bits (244), Expect = 6.330e-22
Identity = 65/186 (34.95%), Postives = 99/186 (53.23%), Query Frame = 1
Query:   16 HPNVTRLINAPRIQQRTDEWMEFRRIRLTASDASKVLAKGG-KSRTSLFLEKV-GDKEPFSGNDATTSGTRNEENALNQYKNMYPGAVIFDNLTIMVHDTHDELAASLDAVTADGINLELKT------IHGIKLKSIPKAYRDQVQLQMEVCNLETTHLVQYYIDLEQTVFTV----IGRDREWFE 537
            HP V +L+  P+ +QR+ EW + R   +TASD   VL +   KS  +L L+K  G+ +PF GNDAT  G   E+ A+ +Y  +    V+  +  +++H  +  L  S D +T DGI LE+K       IHG     +P  Y  QV L +E+C+LE  H +++        F +    + RDREWF+
Sbjct:    2 HPQVEQLLKIPQFEQRSKEWFQQRNNAITASDIPTVLNENVYKSPYTLLLDKCNGNPKPFVGNDATRWGNHYEDIAIEKYSQIKNKEVL--SFGLIIHRDYPWLGGSPDGITTDGILLEVKCPLKRKIIHG----EVPHHYLSQVLLNLEICDLEVAHFIEFVPGNSDDNFEINIVEVLRDREWFK 181          
BLAST of mRNA_P-wetherbeei_contig13786.1.1 vs. uniprot
Match: A0A6C0AZA0_9ZZZZ (YqaJ domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AZA0_9ZZZZ)

HSP 1 Score: 97.8 bits (242), Expect = 2.000e-21
Identity = 64/195 (32.82%), Postives = 95/195 (48.72%), Query Frame = 1
Query:   16 HPNVTRLINAPRIQQRTDEWMEFRRIRLTASDASKVLAKGG-KSRTSLFLEKVG-DKEPFSGNDATTSGTRNEENALNQYKNMYPGAVIFDNLTIMVHDTHDELAASLDAVTADGINLELKTI--HGIKLKSIPKAYRDQVQLQMEVCNLETTHLVQYYIDLEQTVFTV----IGRDREWFETNRDSFLSFVHEV 576
            HP V  L+  P+ +QRT EW   R   +TASD   VL +   K+  +L ++K   + +PF GN AT  G   E+ A+ +Y   Y   V+  +  +++H  H  L  S D +T DGI LE+K      I +  +P  Y  QV L +E+C+LE  H +++        F +    + RDREWF         F   V
Sbjct:    3 HPRVQELLAIPQYEQRTPEWYRQRENAITASDIPTVLGENNYKTPWALLVDKCNANPKPFIGNQATRWGNHYEDIAVERYSERYNKEVL--SFGLLIHRDHSWLGGSPDGITTDGILLEVKCPLKRKIVMGEVPHHYLSQVLLNLEICDLELAHFIEFIPGNSDNDFVMNVVEVHRDREWFSKELPKMKEFWDNV 195          
BLAST of mRNA_P-wetherbeei_contig13786.1.1 vs. uniprot
Match: A0A6G6XQ18_9VIRU (YqaJ domain-containing protein n=1 Tax=Dishui Lake large algae virus 1 TaxID=2704073 RepID=A0A6G6XQ18_9VIRU)

HSP 1 Score: 65.5 bits (158), Expect = 3.780e-9
Identity = 49/153 (32.03%), Postives = 77/153 (50.33%), Query Frame = 1
Query:   25 VTRLINAPRIQQRTDEWMEFRRIRLTASDASKVLAKGG-KSRTSLFLEKV-GDKEPFSGNDATTSGTRNEENALNQYKNMYPGAVIFDNLTIMVHDTHDELAASLDAVTADGINLELKTIHGIKLK-SIPKAYRDQVQLQMEVCNLETTHLVQ 474
            +T L+  P+++QR+ EW + R+ RLTASD +  + +G  ++R  L  +K   +  PF  +     GT  E  AL  Y+    G +      ++ H T D   AS D ++  GI LE K     K+  +IP+ Y  Q+Q Q+ VC L     V+
Sbjct:   68 LTTLMEMPQVEQRSPEWHDMRKNRLTASDTAAAMGRGKFETRKGLLKKKAFPELSPFVSSPIMKWGTMFEPIALRSYRQRN-GDITCHEFGLVPHPTVDHYGASPDGISELGIMLEFKCPPKRKIDGTIPEQYEIQMQGQLAVCGLRECDYVE 219          
BLAST of mRNA_P-wetherbeei_contig13786.1.1 vs. uniprot
Match: A0A6C0BEX2_9ZZZZ (YqaJ domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BEX2_9ZZZZ)

HSP 1 Score: 64.3 bits (155), Expect = 7.040e-9
Identity = 58/199 (29.15%), Postives = 93/199 (46.73%), Query Frame = 1
Query:   31 RLINAPRIQQRTDEWMEFRRIRLTASDASKVLAKGGKSRTSLFLEKVGDKEPFSGNDATTSGTRNEENALNQ------YKNMY-PGAV-IFDNLT--------IMVHDTHDELAASLDAVTADGINLELKTIHGIKLKS-IPKAYRDQVQLQMEVCNLETTHLVQYYIDLEQTVFTVIGRDREWFETNRDSFLSFVHEV 576
            +L+N P++QQ+T++W E R   +TASD ++ L +G        +EK                 R  ENA+++      + NM+ P AV I++ L+        ++ H  +    AS D +T DGI LE+K     KL   IP  Y  Q+Q Q++VC LE         D  + +F ++   RE F   +D     + E+
Sbjct:    8 KLLNIPKVQQKTEKWYEMRMNMITASDFAQALGEGKFGTQKQLIEKK-------------CTPRENENAISKANPFFKWGNMFEPVAVSIYEKLSNAHVHEFGLIQHPKYSFFGASPDGITDDGIMLEIKCPFKRKLTGDIPLQYYYQIQGQLDVCGLEEC-------DYFECMFELVD-SRESFMHIKDKIKGVIKEI 185          
BLAST of mRNA_P-wetherbeei_contig13786.1.1 vs. uniprot
Match: A0A6M2A713_9BACT (YqaJ domain-containing protein (Fragment) n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M2A713_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 9.670e-9
Identity = 51/169 (30.18%), Postives = 89/169 (52.66%), Query Frame = 1
Query:   52 IQQRTDEWMEFRRIRLTASDASKVLAKGG-KSRTSLFLEKVGDKEPFSGNDATTSGTRNEENALNQYKNMYPGAVIFDNLTIMVHDTHDELAASLDAVTADG-INLELKT----IHGIKLKS-IPKAYRDQVQLQMEVCNLETTHLVQYYIDLEQTVFTVIGRDREWFE 537
            ++Q T+EW+EFR++++ +SDA  ++ K   K+   L+ EK+G +E    + A   G   E  A   ++    G V++ N  +++H  H+ + ASLD +T DG   +E+K      H + L   IP+ Y+ Q+Q Q+ V  L+   +  Y  D ++ V   + RD    E
Sbjct:    4 LEQNTEEWLEFRKMKIGSSDAPIIMGKSPWKTPQQLWEEKMGLRESSYESTAMHRGKHLEPAARKAFEKE-TGLVVWPN--VLIHPEHEFIIASLDGITMDGKAAVEIKCPGQKTHQMALNGEIPRHYQIQMQHQLAVTGLK--EMFYYSYDGQRGVTLKVQRDNALIE 167          
BLAST of mRNA_P-wetherbeei_contig13786.1.1 vs. uniprot
Match: A0A2E3ZXC1_9BACT (YqaJ domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E3ZXC1_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 1.300e-8
Identity = 52/153 (33.99%), Postives = 78/153 (50.98%), Query Frame = 1
Query:   55 QQRTDEWMEFRRIRLTASDASKVLAKGG-KSRTSLFLEKVGDKEPFSGNDATTSGTRNEENALNQYKNMYPGAVIFDNLTIMVHDTHDELAASLDAVTAD-------GINLELKTIHGIKL-KSIPKAYRDQVQLQMEVCNLETTHLVQYYID 486
            +QR+ EW E R+ +LTAS  +  L KG  +SR  L L K+ +K PF  N  T  G + E+ A+  Y+ +Y   V+  +  ++ H   D   AS D +  D       G  +E+K     K  K++P  Y  QVQ Q+EVC+L+     Q  I+
Sbjct:   77 EQRSAEWYEMRKEKLTASALADALDKGHFQSRDELILSKIEEK-PFEPNPITEWGVKYEDIAIVFYEELYNVKVL--DFGLIPHPEFDAFGASPDGICDDTGNDKYLGRMVEIKCPPKRKFTKTVPPHYLMQVQGQLEVCDLDECDFFQVKIE 226          
BLAST of mRNA_P-wetherbeei_contig13786.1.1 vs. uniprot
Match: A0A6C0F9F3_9ZZZZ (YqaJ domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F9F3_9ZZZZ)

HSP 1 Score: 63.5 bits (153), Expect = 1.780e-8
Identity = 54/181 (29.83%), Postives = 90/181 (49.72%), Query Frame = 1
Query:   22 NVTRLINAPRIQQRTDEWMEFRRIRLTASDASKVLAKGG-KSRTSLFLEKVGDKEPFSGNDATTSGTRNEENALNQYKNMYPGAVIFDNLTIMVHDTHDELAASLDAVTADGINL-------ELKTIHGIKL-KSIPKAYRDQVQLQMEVCNLETTHLVQYYIDLEQTVFTVIGRDREWFE 537
            N  +L+  P  +QR++EW E R+ RLTAS  +  + K    SR  L L K+ DK P+  N  T  G + E+ A+  Y+ +Y   ++  +  ++ H   +   AS D +  D  NL       E+K     K  K++P+ Y+ QV  Q+EVC+L+     Q  ++  + +   I    ++FE
Sbjct:   72 NNLKLLELP--EQRSEEWYEMRKKRLTASSLAAAIGKCHFTSRDELILSKIEDK-PYESNPITEWGVKYEDVAIMFYEELYNVKIL--DFGLVPHPDFEAFGASPDGICDDTGNLDYIGRMVEIKCPPKRKFTKTVPEHYKLQVLGQLEVCDLDECDFFQVKVEEYENIEEYIN---DYFE 244          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13786.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNK7_ESV1K2.450e-4646.60EsV-1-64 n=2 Tax=root TaxID=1 RepID=Q8QNK7_ESV1K[more]
B5LWE1_9PHYC5.530e-4142.93Putative exonuclease n=1 Tax=Feldmannia species vi... [more]
Q6XLZ3_9PHYC1.480e-3843.52FirrV-1-B43 n=1 Tax=Feldmannia irregularis virus a... [more]
A0A6C0I9L0_9ZZZZ6.330e-2234.95YqaJ domain-containing protein n=1 Tax=viral metag... [more]
A0A6C0AZA0_9ZZZZ2.000e-2132.82YqaJ domain-containing protein n=1 Tax=viral metag... [more]
A0A6G6XQ18_9VIRU3.780e-932.03YqaJ domain-containing protein n=1 Tax=Dishui Lake... [more]
A0A6C0BEX2_9ZZZZ7.040e-929.15YqaJ domain-containing protein n=1 Tax=viral metag... [more]
A0A6M2A713_9BACT9.670e-930.18YqaJ domain-containing protein (Fragment) n=1 Tax=... [more]
A0A2E3ZXC1_9BACT1.300e-833.99YqaJ domain-containing protein n=1 Tax=Candidatus ... [more]
A0A6C0F9F3_9ZZZZ1.780e-829.83YqaJ domain-containing protein n=1 Tax=viral metag... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13786contigP-wetherbeei_contig13786:308..889 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog10506.Q84486_PBCV1
Model size582
Max annot lvl10239|Viruses
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360
Exons1
Evalue1.09e-19
EggNOG OGs4QCB0@10239|Viruses,4QX81@35237|dsDNA viruses no RNA stage
Ec32 ortholog descriptionEsV-1-64 nuclease
Ec32 orthologEc-06_006150.1
Descriptioninduction by virus of catabolism of host mRNA
Cds size582
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185997.3146935-CDS-P-wetherbeei_contig13786:307..8891683185997.3146935-CDS-P-wetherbeei_contig13786:307..889Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13786 308..889 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13786.1.1prot_P-wetherbeei_contig13786.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13786 308..889 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13786.1.1

>prot_P-wetherbeei_contig13786.1.1 ID=prot_P-wetherbeei_contig13786.1.1|Name=mRNA_P-wetherbeei_contig13786.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=194bp
MATVCHPNVTRLINAPRIQQRTDEWMEFRRIRLTASDASKVLAKGGKSRT
SLFLEKVGDKEPFSGNDATTSGTRNEENALNQYKNMYPGAVIFDNLTIMV
HDTHDELAASLDAVTADGINLELKTIHGIKLKSIPKAYRDQVQLQMEVCN
LETTHLVQYYIDLEQTVFTVIGRDREWFETNRDSFLSFVHEVRE
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mRNA from alignment at P-wetherbeei_contig13786:308..889+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13786.1.1 ID=mRNA_P-wetherbeei_contig13786.1.1|Name=mRNA_P-wetherbeei_contig13786.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig13786:308..889+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGACGGTTTGTCATCCGAATGTGACACGTCTCATCAATGCGCCGAG GATCCAGCAGCGCACAGATGAATGGATGGAGTTCCGGAGGATACGGCTGA CGGCATCCGATGCGTCTAAAGTATTGGCTAAAGGAGGAAAGTCACGAACA TCACTATTCCTTGAGAAAGTGGGTGACAAGGAGCCATTTTCAGGAAATGA TGCAACAACGAGTGGAACACGCAACGAGGAGAATGCGCTTAATCAATACA AAAACATGTACCCCGGTGCCGTCATTTTTGACAATCTTACCATTATGGTT CATGATACTCATGATGAGCTTGCGGCCTCTTTGGATGCCGTGACCGCAGA CGGGATTAATCTCGAGCTCAAGACAATACACGGCATCAAGCTCAAGTCCA TCCCCAAAGCATACCGTGATCAAGTCCAATTGCAAATGGAAGTGTGCAAC CTTGAAACAACACACCTTGTTCAGTACTACATTGACCTTGAACAAACAGT CTTCACCGTGATTGGAAGAGACAGGGAATGGTTCGAAACAAACCGTGACT CGTTTCTATCCTTTGTCCATGAAGTCCGGGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13786:308..889+

>mRNA_P-wetherbeei_contig13786.1.1 ID=mRNA_P-wetherbeei_contig13786.1.1|Name=mRNA_P-wetherbeei_contig13786.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig13786:308..889+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGACGGTTTGTCATCCGAATGTGACACGTCTCATCAATGCGCCGAG
GATCCAGCAGCGCACAGATGAATGGATGGAGTTCCGGAGGATACGGCTGA
CGGCATCCGATGCGTCTAAAGTATTGGCTAAAGGAGGAAAGTCACGAACA
TCACTATTCCTTGAGAAAGTGGGTGACAAGGAGCCATTTTCAGGAAATGA
TGCAACAACGAGTGGAACACGCAACGAGGAGAATGCGCTTAATCAATACA
AAAACATGTACCCCGGTGCCGTCATTTTTGACAATCTTACCATTATGGTT
CATGATACTCATGATGAGCTTGCGGCCTCTTTGGATGCCGTGACCGCAGA
CGGGATTAATCTCGAGCTCAAGACAATACACGGCATCAAGCTCAAGTCCA
TCCCCAAAGCATACCGTGATCAAGTCCAATTGCAAATGGAAGTGTGCAAC
CTTGAAACAACACACCTTGTTCAGTACTACATTGACCTTGAACAAACAGT
CTTCACCGTGATTGGAAGAGACAGGGAATGGTTCGAAACAAACCGTGACT
CGTTTCTATCCTTTGTCCATGAAGTCCGGGAA
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