mRNA_P-wetherbeei_contig13741.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13741.1.1 vs. uniprot
Match: D7FYS6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS6_ECTSI) HSP 1 Score: 319 bits (818), Expect = 1.090e-108 Identity = 152/209 (72.73%), Postives = 173/209 (82.78%), Query Frame = 1
Query: 4 VIVGRLVMSGLPALDKATYPLRFCYNVLQVMLCSYMCIEAGVVAYRNGYSLLPCEPFDHVSPPMARVLWLFYTSKVLDFADTFFIVLGKKWKQLSFLHVYHHITIFLFYWLNLNAGFDGDIYLTIVLNGFIHTVMYTYYFVSMHTADIWWKKYLTLMQMAQFVTMCSQAGYLISCSCQSYPPRITQVYMGYILSLLVLFAQFYVASYSK 630
V VG VM+ + +D YP+RF YNV+Q++LCSYMC+EA ++AYRNGY +LPC PFD +PP A +LWLFY SKVLDF DT FIVL K W+QLSFLHVYHH TIFLFYWLN+NAG+DGD+YLTIVLNGFIHTVMYTYYFVSMHT DIWWKKYLTLMQM QFV M +QA YL++ C SYPPRI VY GYILSLL LFAQFYV SY+K
Sbjct: 2 VTVGPKVMADMSPIDS--YPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTK 208
BLAST of mRNA_P-wetherbeei_contig13741.1.1 vs. uniprot
Match: L1IAX0_GUITC (Elongation of fatty acids protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IAX0_GUITC) HSP 1 Score: 317 bits (812), Expect = 7.300e-107 Identity = 144/207 (69.57%), Postives = 176/207 (85.02%), Query Frame = 1
Query: 4 VIVGRLVMSGLPALDKATYPLRFCYNVLQVMLCSYMCIEAGVVAYRNGYSLLPCEPFDHVSPPMARVLWLFYTSKVLDFADTFFIVLGKKWKQLSFLHVYHHITIFLFYWLNLNAGFDGDIYLTIVLNGFIHTVMYTYYFVSMHTADIWWKKYLTLMQMAQFVTMCSQAGYLISCSCQSYPPRITQVYMGYILSLLVLFAQFYVASY 624
VIVGR+VM +LDK TYP+RF YN+LQVMLCSYM +EAG++AYR+ Y+L+PC PF +PP+A VLWLFY SKVLDF DTFFIVLGKKW+QLSFLHVYHH+TIF+ YW+N+N G+DGDIYLTIVLNGFIHTVMYTYYFVSMHT DIWWKKYLT+MQM QF+TM QA +L+ +CQ++P ++TQ+Y+ YI+SL LF F++ SY
Sbjct: 59 VIVGRIVMIPFRSLDKLTYPIRFVYNILQVMLCSYMTLEAGILAYRHNYNLVPCNPFKTENPPIAPVLWLFYISKVLDFMDTFFIVLGKKWEQLSFLHVYHHLTIFMIYWMNVNVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTMMQMIQFITMNGQAIWLLQSNCQTFPRKVTQLYLVYIMSLFALFLNFFIRSY 265
BLAST of mRNA_P-wetherbeei_contig13741.1.1 vs. uniprot
Match: A0A835Z8H5_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H5_9STRA) HSP 1 Score: 313 bits (803), Expect = 1.490e-105 Identity = 144/208 (69.23%), Postives = 167/208 (80.29%), Query Frame = 1
Query: 1 FVIVGRLVMSGLPALDKATYPLRFCYNVLQVMLCSYMCIEAGVVAYRNGYSLLPCEPFDHVSPPMARVLWLFYTSKVLDFADTFFIVLGKKWKQLSFLHVYHHITIFLFYWLNLNAGFDGDIYLTIVLNGFIHTVMYTYYFVSMHTADIWWKKYLTLMQMAQFVTMCSQAGYLISCSCQSYPPRITQVYMGYILSLLVLFAQFYVASY 624
F+ VG VM + LD TYP RF YN++Q+MLCSYMC+EAG++A+RN Y +LPC PF+ +PP+ VLWLFY SK+LDFADT FIVL KKWKQLSFLHVYHH TIFLFYWLN+N G+DGDIYLTIVLNGFIHTVMYTYYFVSMHT IWWK LT MQM QFVTM SQA YL++ C +YPPR+TQ Y YI SLL+LF F++ SY
Sbjct: 51 FIFVGSFVMKFVQPLDAPTYPFRFIYNIVQIMLCSYMCLEAGIIAHRNNYGILPCVPFNVQNPPVGNVLWLFYISKILDFADTVFIVLRKKWKQLSFLHVYHHTTIFLFYWLNINVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTDKIWWKSSLTAMQMVQFVTMISQALYLLTTGCTTYPPRVTQAYCLYIFSLLILFGNFFIKSY 258
BLAST of mRNA_P-wetherbeei_contig13741.1.1 vs. uniprot
Match: A0A6U1Q8V8_9STRA (Elongation of fatty acids protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q8V8_9STRA) HSP 1 Score: 305 bits (782), Expect = 3.360e-102 Identity = 144/212 (67.92%), Postives = 176/212 (83.02%), Query Frame = 1
Query: 1 FVIVGRLV--MSGLPALDKATYPLRFCYNVLQVMLCSYMCIEAGVVAYRNGYSLLPCEPFDHVSPPMARVLWLFYTSKVLDFADTFFIVLGKKWKQLSFLHVYHHITIFLFYWLNLNAGFDGDIYLTIVLNGFIHTVMYTYYFVSMHTADIWWKKYLTLMQMAQFVTMCSQAGYLISCSCQSYPPRITQVYMGYILSLLVLFAQFYVASYSK 630
FV+VG ++ + +PA+ YP++F YN++QVMLCSYM IEAG+VA+R GY+ LPCEPF+ +PP+A VL++FY SK+LDF DTFFI++GKKWKQLSFLHVYHH +IFLFYWLN+N G+DGD+YLTIVLNGFIHTVMYTYYFVS+HT DIWWK LT+ QM QFVTM +QAGYL+ C+SYPPRI Y+ YILSLLVLFA F+V SY K
Sbjct: 60 FVLVGSMLFKVEAVPAIKL--YPVQFLYNIVQVMLCSYMAIEAGMVAFRQGYTCLPCEPFNAKNPPVAEVLYIFYLSKILDFMDTFFIIIGKKWKQLSFLHVYHHTSIFLFYWLNINVGYDGDVYLTIVLNGFIHTVMYTYYFVSLHTKDIWWKSSLTMCQMIQFVTMNAQAGYLLLTGCKSYPPRIVLSYLVYILSLLVLFANFFVQSYLK 269
BLAST of mRNA_P-wetherbeei_contig13741.1.1 vs. uniprot
Match: A0A6T8G4U0_HEMAN (Elongation of fatty acids protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8G4U0_HEMAN) HSP 1 Score: 297 bits (761), Expect = 3.380e-99 Identity = 132/209 (63.16%), Postives = 167/209 (79.90%), Query Frame = 1
Query: 1 FVIVGRLVMSGLPALDKATYPLRFCYNVLQVMLCSYMCIEAGVVAYRNGYSLLPCEPFDHVSPPMARVLWLFYTSKVLDFADTFFIVLGKKWKQLSFLHVYHHITIFLFYWLNLNAGFDGDIYLTIVLNGFIHTVMYTYYFVSMHTADIWWKKYLTLMQMAQFVTMCSQAGYLISCSCQSYPPRITQVYMGYILSLLVLFAQFYVASYS 627
FV+ GR+VM+ +D+ TYP+RFCYN++Q+MLCSYM IEA +AYRNGY++ PC PFD SPP+ +LWLFY SK+LDF DT I+LGKKW QLSFLHVYHH TIF+ YW+N+N G+DGDIYLTIVLNG IHT+MYTYYFVSMH+ DIWWKKYLT+ QM QF+ M SQA LI C+++P R+T Y+ YI++L LF +F++ SY+
Sbjct: 52 FVLAGRIVMTVFHPMDRLTYPIRFCYNIVQMMLCSYMTIEAAALAYRNGYNMYPCNPFDTKSPPLGPLLWLFYVSKILDFVDTAVIILGKKWGQLSFLHVYHHATIFIMYWVNVNVGYDGDIYLTIVLNGVIHTIMYTYYFVSMHSRDIWWKKYLTMCQMIQFICMNSQAILLIKDHCKTFPARVTMTYLFYIITLFFLFLKFFITSYT 260
BLAST of mRNA_P-wetherbeei_contig13741.1.1 vs. uniprot
Match: A0A1S7C7Q3_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7Q3_9STRA) HSP 1 Score: 294 bits (753), Expect = 6.790e-98 Identity = 139/208 (66.83%), Postives = 165/208 (79.33%), Query Frame = 1
Query: 4 VIVGRLVMSGLPALDKATYPLRFCYNVLQVMLCSYMCIEAGVVAYRNGYSLLPCEPFDHVSPPMARVLWLFYTSKVLDFADTFFIVLGKKWKQLSFLHVYHHITIFLFYWLNLNAGFDGDIYLTIVLNGFIHTVMYTYYFVSMHTADIWWKKYLTLMQMAQFVTMCSQAGYLISCSCQSYPPRITQVYMGYILSLLVLFAQFYVASYS 627
V VG +M A Y L+F YN+ QV LCSYMCIEA + AYRN Y+ LPCEPF+ +PP+A +LWLFY SKV DFADT FI+LGKKW QLSFLHVYHH+TIFL YWLNLNAG+DGDI+LT++LNG IHTVMYTYYF+SMHT DIWWKKYLTL Q+ QF+TM +QA YL+ C+ + P+IT++Y+GYILSLLVLF FY SYS
Sbjct: 57 VFVGSAMMKN--AQPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYS 262
BLAST of mRNA_P-wetherbeei_contig13741.1.1 vs. uniprot
Match: W7TSM8_9STRA (Elongation of fatty acids protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSM8_9STRA) HSP 1 Score: 295 bits (756), Expect = 8.640e-98 Identity = 138/210 (65.71%), Postives = 167/210 (79.52%), Query Frame = 1
Query: 1 FVIVGRLVMSGLPALDKATYPLRFCYNVLQVMLCSYMCIEAGVVAYRNGYSLLPCEPFDHVSPPMARVLWLFYTSKVLDFADTFFIVLGKKWKQLSFLHVYHHITIFLFYWLNLNAGFDGDIYLTIVLNGFIHTVMYTYYFVSMHTADIWWKKYLTLMQMAQFVTMCSQAGYLISCSCQSYPPRITQVYMGYILSLLVLFAQFYVASYSK 630
FV VG +VM A Y L+F YN+ QV LCSYMCIEA + AYRN Y+LLPCEPF+ +PP+ +LWLFY SK+ DFADT FI+LGKKW QLSFLHVYHH+TIFL YWLNLNAG+DGDI+LT++LNG IHTVMY YYF+SMHT DIWWKKYLTL Q+ QF+TM +QA Y++ C+S+P +IT++Y+GYILSLLVLF FY +YS
Sbjct: 68 FVFVGSIVMKD--AQPVKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSS 275
BLAST of mRNA_P-wetherbeei_contig13741.1.1 vs. uniprot
Match: A0A0G4I034_9ALVE (Elongation of fatty acids protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I034_9ALVE) HSP 1 Score: 292 bits (748), Expect = 7.840e-97 Identity = 136/212 (64.15%), Postives = 166/212 (78.30%), Query Frame = 1
Query: 1 FVIVGRLVMS--GLPALDKATYPLRFCYNVLQVMLCSYMCIEAGVVAYRNGYSLLPCEPFDHVSPPMARVLWLFYTSKVLDFADTFFIVLGKKWKQLSFLHVYHHITIFLFYWLNLNAGFDGDIYLTIVLNGFIHTVMYTYYFVSMHTADIWWKKYLTLMQMAQFVTMCSQAGYLISCSCQSYPPRITQVYMGYILSLLVLFAQFYVASYSK 630
FV G L MS +PA+++ TYP RF YNV QVMLCSYM IEA ++AYRN Y L+PC F+ +PP+A +LW+FY SK+ DFADT FI+LGKKW+QLSFLHVYHH TIF YW+NL G+DGD+YLTIVLNGFIH VMYTYYF+SMHT DIWWK LT MQM QF+ M QA +++ CQ YPPR+T +Y+ YI+SL +LFAQF+V +YSK
Sbjct: 72 FVFFGSLFMSVFRIPAMERVTYPFRFVYNVAQVMLCSYMTIEAVLLAYRNDYGLVPCVKFNPQNPPVANLLWMFYISKIFDFADTIFIILGKKWQQLSFLHVYHHATIFSIYWVNLRLGYDGDVYLTIVLNGFIHAVMYTYYFLSMHTKDIWWKSKLTSMQMLQFICMNVQASWMLLNGCQQYPPRLTAIYLVYIMSLFLLFAQFFVRTYSK 283
BLAST of mRNA_P-wetherbeei_contig13741.1.1 vs. uniprot
Match: F0Y9P2_AURAN (Elongation of fatty acids protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9P2_AURAN) HSP 1 Score: 284 bits (727), Expect = 3.550e-94 Identity = 135/208 (64.90%), Postives = 160/208 (76.92%), Query Frame = 1
Query: 1 FVIVGRLVMSGLPALDKATYPLRFCYNVLQVMLCSYMCIEAGVVAYRNGYSLLPCEPFDHVSPPMARVLWLFYTSKVLDFADTFFIVLGKKWKQLSFLHVYHHITIFLFYWLNLNAGFDGDIYLTIVLNGFIHTVMYTYYFVSMHTADIWWKKYLTLMQMAQFVTMCSQAGYLISCSCQSYPPRITQVYMGYILSLLVLFAQFYVASY 624
FV+VG L+M P Y + F YN+ QVMLCSYMCIEA +VA R+ ++L+ C +D PPMA VLWLFY SKVLDF DTFFIV+GKKWKQLSFLHVYHH TIFLFYWLNL+ +DGDIYLTIVLNG IHT+MYTYYFVSMHT DIWWKKYLTL Q+ QF M +QA Y+ C + PPR+T +Y YI+SL +LF QF+++SY
Sbjct: 47 FVLVGSLIMRAYPGDGIKLYGVAFLYNIAQVMLCSYMCIEAVIVAKRSNFNLV-CNSYDAKHPPMANVLWLFYASKVLDFVDTFFIVIGKKWKQLSFLHVYHHTTIFLFYWLNLHVNYDGDIYLTIVLNGAIHTIMYTYYFVSMHTRDIWWKKYLTLAQLVQFTCMNAQAIYMFVTGCSATPPRVTAIYFVYIISLFILFLQFFMSSY 253
BLAST of mRNA_P-wetherbeei_contig13741.1.1 vs. uniprot
Match: A0A7R9WGN6_9STRA (Elongation of fatty acids protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGN6_9STRA) HSP 1 Score: 283 bits (725), Expect = 1.070e-93 Identity = 141/219 (64.38%), Postives = 166/219 (75.80%), Query Frame = 1
Query: 1 FVIVGRLVM-SGLPALDKATYPLRFCYNVLQVMLCSYMCIEAGVVAYRNGYSLLPCEPFDHVSPPMARVLWLFYTSKVLDFADTFFIVLGKKWKQLSFLHVYHHITIFLFYWLNLNAGFDGDIYLTIVLNGFIHTVMYTYYFVSMHTAD--------IWWKKYLTLMQMAQFVTMCSQAGYLISCSCQSYPPRITQVYMGYILSLLVLFAQFYVASYSK 630
FV++G VM SG+ A+D YP++F YNV Q+MLC+YM IEA ++AYRNGY+ LPC D +PP+A +LWLFY SKV DF DT FIV+GKKW+QLSFLHVYHH TIFLFYWLN + +DGDIYLTI+LNGFIHTVMYTYYF+ MHT D IWWK YLTLMQM QFVTM SQA YL+ C+ R+ VY+ YILSL LFAQFYV SY+K
Sbjct: 50 FVVIGSAVMKSGVAAMDP--YPIKFIYNVSQIMLCAYMTIEAFLLAYRNGYTCLPCNNVDTENPPLANLLWLFYISKVWDFWDTVFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSYLTLMQMIQFVTMMSQATYLLGTQCEKTSLRVVFVYLVYILSLFFLFAQFYVQSYTK 266 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13741.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13741.1.1 >prot_P-wetherbeei_contig13741.1.1 ID=prot_P-wetherbeei_contig13741.1.1|Name=mRNA_P-wetherbeei_contig13741.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=202bp MSGLPALDKATYPLRFCYNVLQVMLCSYMCIEAGVVAYRNGYSLLPCEPFback to top mRNA from alignment at P-wetherbeei_contig13741:70..1338+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13741.1.1 ID=mRNA_P-wetherbeei_contig13741.1.1|Name=mRNA_P-wetherbeei_contig13741.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1269bp|location=Sequence derived from alignment at P-wetherbeei_contig13741:70..1338+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13741:70..1338+ >mRNA_P-wetherbeei_contig13741.1.1 ID=mRNA_P-wetherbeei_contig13741.1.1|Name=mRNA_P-wetherbeei_contig13741.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig13741:70..1338+ (Phaeothamnion wetherbeei SAG_119_79)back to top |