prot_P-wetherbeei_contig13726.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13726.1.1
Unique Nameprot_P-wetherbeei_contig13726.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length173
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig13726.1.1 vs. uniprot
Match: A0A7C3JRL0_9PROT (Tetratricopeptide repeat protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3JRL0_9PROT)

HSP 1 Score: 75.1 bits (183), Expect = 1.360e-12
Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 0 
Query:    1 AQERLQAGDAVGAQRLCEEVLARAPRNPDALCLLGITLLMAARPRDAVSPLTQA 54
            A +RL+ GDA GA+ LCEEVL RAPRNPDALCLLG+T L   R RDAV PL QA
Sbjct:   37 AHDRLREGDAAGAEFLCEEVLQRAPRNPDALCLLGLTRLATGRARDAVPPLQQA 90
[Close]
BLAST of mRNA_P-wetherbeei_contig13726.1.1 vs. uniprot
Match: A0A1F4DV50_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DV50_9PROT)

HSP 1 Score: 63.2 bits (152), Expect = 1.840e-8
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 0 
Query:    1 AQERLQAGDAVGAQRLCEEVLARAPRNPDALCLLGITLLMAAR 43
            AQERLQ GD  GAQ LCE+VL RAPRNPDALCLLG+  L++ R
Sbjct:   12 AQERLQNGDVAGAQFLCEQVLQRAPRNPDALCLLGMARLISGR 54
[Close]
BLAST of mRNA_P-wetherbeei_contig13726.1.1 vs. uniprot
Match: A0A1F4CQN7_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CQN7_9PROT)

HSP 1 Score: 60.8 bits (146), Expect = 1.150e-7
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    8 GDAVGAQRLCEEVLARAPRNPDALCLLGITLLMAARPRDAV 48
            GD  GAQ LCE+VL RAPRNP+ALCLLG++ LM+ RP +AV
Sbjct:    2 GDVAGAQFLCEQVLQRAPRNPEALCLLGVSHLMSGRPAEAV 42
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13726.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7C3JRL0_9PROT1.360e-1270.37Tetratricopeptide repeat protein n=1 Tax=Betaprote... [more]
A0A1F4DV50_9PROT1.840e-872.09Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1F4CQN7_9PROT1.150e-768.29Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 130..163
e-value: 0.0023
score: 27.2
coord: 28..61
e-value: 11.0
score: 14.7
coord: 96..129
e-value: 0.052
score: 22.7
coord: 62..95
e-value: 12.0
score: 14.1
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 130..163
score: 10.2664
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 96..129
score: 10.1484
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 101..173
e-value: 1.2E-17
score: 65.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..100
e-value: 2.5E-16
score: 61.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..168
NoneNo IPR availablePFAMPF13432TPR_16coord: 34..95
e-value: 9.3E-8
score: 32.5
NoneNo IPR availablePFAMPF14559TPR_19coord: 109..164
e-value: 2.0E-8
score: 34.6
NoneNo IPR availablePANTHERPTHR44809FAMILY NOT NAMEDcoord: 21..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13726contigP-wetherbeei_contig13726:627..1145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13726.1.1mRNA_P-wetherbeei_contig13726.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13726 627..1145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13726.1.1 ID=prot_P-wetherbeei_contig13726.1.1|Name=mRNA_P-wetherbeei_contig13726.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp
AQERLQAGDAVGAQRLCEEVLARAPRNPDALCLLGITLLMAARPRDAVSP
LTQALAAQPRHGAALENLGLAHLMLGEFADAERALDTAAALPNAPASVYM
RLGAAILNQGRHAAAIPQLERALKLAANNPDIHLNLGQALAGAGDMAAAR
RQFETALRLAPDHADSMYNLGVI
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf