mRNA_P-wetherbeei_contig13706.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13706.1.1 vs. uniprot
Match: D7FKS7_ECTSI (T-complex protein 1 subunit delta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS7_ECTSI) HSP 1 Score: 258 bits (660), Expect = 2.890e-81 Identity = 135/169 (79.88%), Postives = 152/169 (89.94%), Query Frame = 1
Query: 1 KVVKMTGVPHTGRTMTVLVRGSNRLVLDEAERSIHDALCVVRSLVKRRFLIAGGGAPEAEVATALAEWSKTQTGMRAYCVRAYAEALEVIPYTLAENAGMNPISLVTELRARHSVAGGSGAGINVRKATVSDMYAENVVQPMLVSMSALKLATECVCMILKIDDVVAVM 507
K+VK+TGVP TG TMTVL+RGSNRLVLDEAERS+HDALCVVRSLVK+RFLI+GGGA E EVA L EW+KTQTGMR YC+RAY EALEV+PYTLAENAGMNPIS+VTELR+ H+ G GAGINVRK T+SDMYAE+V+QP+LV+ SALKLATECV MILKIDDVVAVM
Sbjct: 363 KIVKVTGVPTTGMTMTVLMRGSNRLVLDEAERSVHDALCVVRSLVKKRFLISGGGAAETEVAMQLTEWAKTQTGMRGYCIRAYGEALEVVPYTLAENAGMNPISIVTELRSEHA-KGKVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAVM 530
BLAST of mRNA_P-wetherbeei_contig13706.1.1 vs. uniprot
Match: A0A6S9KYX5_HETAK (T-complex protein 1 subunit delta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KYX5_HETAK) HSP 1 Score: 244 bits (622), Expect = 1.450e-75 Identity = 130/167 (77.84%), Postives = 147/167 (88.02%), Query Frame = 1
Query: 4 VVKMTGVPHTGRTMTVLVRGSNRLVLDEAERSIHDALCVVRSLVKRRFLIAGGGAPEAEVATALAEWSKTQTGMRAYCVRAYAEALEVIPYTLAENAGMNPISLVTELRARHSVAGGSGAGINVRKATVSDMYAENVVQPMLVSMSALKLATECVCMILKIDDVVAV 504
VVK+TG+P +T+L+RGSNRLVLDEA+RS+HDALCVVRSLVK++FLIAGGGAPE EVA L EW+KTQTGMRA+CV+AYAEALEVIPYTLAENAGMNPI+LVTELR+RHS G GAGINVR+ VSDMY E VVQP+LVS SAL LATECV MILKIDDVV+V
Sbjct: 366 VVKVTGLPDARGKVTLLMRGSNRLVLDEADRSMHDALCVVRSLVKKKFLIAGGGAPETEVAVRLMEWAKTQTGMRAFCVKAYAEALEVIPYTLAENAGMNPIALVTELRSRHS-EGEGGAGINVRRGVVSDMYRERVVQPLLVSSSALGLATECVTMILKIDDVVSV 531
BLAST of mRNA_P-wetherbeei_contig13706.1.1 vs. uniprot
Match: A0A835YW20_9STRA (T-complex protein 1 subunit delta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW20_9STRA) HSP 1 Score: 243 bits (621), Expect = 1.860e-75 Identity = 129/167 (77.25%), Postives = 143/167 (85.63%), Query Frame = 1
Query: 1 KVVKMTGVPHTGRTMTVLVRGSNRLVLDEAERSIHDALCVVRSLVKRRFLIAGGGAPEAEVATALAEWSKTQTGMRAYCVRAYAEALEVIPYTLAENAGMNPISLVTELRARHSVAGGSGAGINVRKATVSDMYAENVVQPMLVSMSALKLATECVCMILKIDDVVA 501
KVVK TG P+ G T T+LVRGSNRLVLDEAERSIHDALCVVRSLVK+RFLIAGGGA E E+A L +WSKT TGM+AYC++AYAEALEV+PYTLAENAG+NPI VTELRA+H AG SGAGINVR ++DMY VVQPMLVS SA+KLATECV MILKIDDVVA
Sbjct: 361 KVVKCTGTPNAGMTTTILVRGSNRLVLDEAERSIHDALCVVRSLVKKRFLIAGGGAAETEMALRLGDWSKTLTGMQAYCIKAYAEALEVVPYTLAENAGLNPIQKVTELRAKHG-AGVSGAGINVRSGEITDMYESGVVQPMLVSSSAIKLATECVGMILKIDDVVA 526
BLAST of mRNA_P-wetherbeei_contig13706.1.1 vs. uniprot
Match: A0A482RM47_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RM47_9ARCH) HSP 1 Score: 223 bits (567), Expect = 5.300e-71 Identity = 115/168 (68.45%), Postives = 141/168 (83.93%), Query Frame = 1
Query: 1 KVVKMTGVPHTGRTMTVLVRGSNRLVLDEAERSIHDALCVVRSLVKRRFLIAGGGAPEAEVATALAEWSKTQTGMRAYCVRAYAEALEVIPYTLAENAGMNPISLVTELRARHSVAGGSGAGINVRKATVSDMYAENVVQPMLVSMSALKLATECVCMILKIDDVVAV 504
KV K+TGV H GRT+++LVRGSNRLVLDE +RS+HDALCVVRSLVK++FLIAGGGAPE E+A L +WSKT +GM CVRA+A+A+E+IPYTLAENAGMNP+++VTELR RH+ G AGINV+K +SD+ ENV+QP+LVS S + LATE V MILKIDD+VAV
Sbjct: 61 KVTKITGVAHPGRTVSLLVRGSNRLVLDETDRSLHDALCVVRSLVKKKFLIAGGGAPETEIALQLTQWSKTLSGMHGVCVRAFADAMEIIPYTLAENAGMNPMAIVTELRKRHA-EGVKTAGINVKKGIISDILEENVIQPLLVSTSEIALATETVRMILKIDDIVAV 227
BLAST of mRNA_P-wetherbeei_contig13706.1.1 vs. uniprot
Match: A0A7S2V5I1_9STRA (T-complex protein 1 subunit delta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5I1_9STRA) HSP 1 Score: 230 bits (587), Expect = 2.390e-70 Identity = 118/168 (70.24%), Postives = 146/168 (86.90%), Query Frame = 1
Query: 1 KVVKMTGVPHTGRTMTVLVRGSNRLVLDEAERSIHDALCVVRSLVKRRFLIAGGGAPEAEVATALAEWSKTQTGMRAYCVRAYAEALEVIPYTLAENAGMNPISLVTELRARHSVAGGSGAGINVRKATVSDMYAENVVQPMLVSMSALKLATECVCMILKIDDVVAV 504
KVVK TGV + ++ +L+RGSN+LVLDEA+RS+HDALCV+RSLVK +F+IAGGGAPE EVA L EWSKTQTGM+AYC+RA+AEA+EVIPYTLAENAG+NPI+LVTELR +H+ SGAG+NVRK+ +SDMY E+V+QP+LVS SA+ LA+ECV MILKIDD+V V
Sbjct: 365 KVVKFTGVANPDASVCILLRGSNKLVLDEADRSVHDALCVMRSLVKEKFMIAGGGAPETEVAVRLMEWSKTQTGMKAYCIRAFAEAMEVIPYTLAENAGLNPITLVTELRKKHN-EDESGAGLNVRKSIISDMYKEHVIQPLLVSTSAVGLASECVNMILKIDDLVVV 531
BLAST of mRNA_P-wetherbeei_contig13706.1.1 vs. uniprot
Match: W7T7M9_9STRA (T-complex protein 1 subunit delta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7M9_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.170e-68 Identity = 114/168 (67.86%), Postives = 143/168 (85.12%), Query Frame = 1
Query: 1 KVVKMTGVPHTGRTMTVLVRGSNRLVLDEAERSIHDALCVVRSLVKRRFLIAGGGAPEAEVATALAEWSKTQTGMRAYCVRAYAEALEVIPYTLAENAGMNPISLVTELRARHSVAGGSGAGINVRKATVSDMYAENVVQPMLVSMSALKLATECVCMILKIDDVVAV 504
KVVK+TGV + G TM++L+RGSN+LVL+EA+RS+HDALCVVRSLVK+RFLIAGGGA E EV L EWSK Q GM+AYCV A+A++LEV+PYTLAEN G+NPI++VTELR RH+ G G GINVR++ +SDMY E VVQP+LVS+SA+ LA+E VCM++KIDD+V V
Sbjct: 384 KVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHA-GGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLVPV 550
BLAST of mRNA_P-wetherbeei_contig13706.1.1 vs. uniprot
Match: A0A7R9U684_9STRA (T-complex protein 1 subunit delta n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U684_9STRA) HSP 1 Score: 226 bits (575), Expect = 1.860e-68 Identity = 117/168 (69.64%), Postives = 140/168 (83.33%), Query Frame = 1
Query: 1 KVVKMTGVPHTGRTMTVLVRGSNRLVLDEAERSIHDALCVVRSLVKRRFLIAGGGAPEAEVATALAEWSKTQTGMRAYCVRAYAEALEVIPYTLAENAGMNPISLVTELRARHSVAGGSGAGINVRKATVSDMYAENVVQPMLVSMSALKLATECVCMILKIDDVVAV 504
+VVK+TG+ + G+TMT+L+RGSN+LVLDEAERS+HDALCV+RSLVK RF+IAGGGAPE ++A L EWS Q GM AYC +AYAEALE+IPYTLAENAGMN + +VTELRA H G G GINVR +SDMY E+V+QP+LVS+SAL LATECV MILKIDD +AV
Sbjct: 376 RVVKVTGIENQGKTMTMLLRGSNKLVLDEAERSVHDALCVLRSLVKERFMIAGGGAPETQLAVRLMEWSSKQQGMVAYCAKAYAEALEIIPYTLAENAGMNAMRMVTELRAHHK-DGPPGVGINVRTNQISDMYEEHVMQPLLVSLSALGLATECVVMILKIDDAIAV 542
BLAST of mRNA_P-wetherbeei_contig13706.1.1 vs. uniprot
Match: A0A445DNF1_ARAHY (Uncharacterized protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A445DNF1_ARAHY) HSP 1 Score: 218 bits (555), Expect = 9.220e-68 Identity = 115/168 (68.45%), Postives = 138/168 (82.14%), Query Frame = 1
Query: 1 KVVKMTGVPHTGRTMTVLVRGSNRLVLDEAERSIHDALCVVRSLVKRRFLIAGGGAPEAEVATALAEWSKTQTGMRAYCVRAYAEALEVIPYTLAENAGMNPISLVTELRARHSVAGGSGAGINVRKATVSDMYAENVVQPMLVSMSALKLATECVCMILKIDDVVAV 504
K+VK+TG+ G+T TVLVRGSN+LVLDEA+RS+HDALCVVR LV +RFLIAGGGAPE E++ L W+K GM YCVRA+AEALEVIPYTLAENAG+NPI++VTELR RH+ G AGINVRK ++++ ENVVQP+LVS SA+ LATECV MILKIDD+V V
Sbjct: 168 KIVKITGIKDMGKTTTVLVRGSNQLVLDEADRSLHDALCVVRCLVAKRFLIAGGGAPEIELSRQLGAWAKVLHGMEGYCVRAFAEALEVIPYTLAENAGLNPIAIVTELRNRHA-QGEINAGINVRKGQITNILEENVVQPLLVSTSAITLATECVRMILKIDDIVTV 334
BLAST of mRNA_P-wetherbeei_contig13706.1.1 vs. uniprot
Match: A0A7J0FAF0_9ERIC (T-complex protein 1 subunit delta n=2 Tax=asterids TaxID=71274 RepID=A0A7J0FAF0_9ERIC) HSP 1 Score: 222 bits (566), Expect = 1.500e-67 Identity = 116/168 (69.05%), Postives = 141/168 (83.93%), Query Frame = 1
Query: 1 KVVKMTGVPHTGRTMTVLVRGSNRLVLDEAERSIHDALCVVRSLVKRRFLIAGGGAPEAEVATALAEWSKTQTGMRAYCVRAYAEALEVIPYTLAENAGMNPISLVTELRARHSVAGGSGAGINVRKATVSDMYAENVVQPMLVSMSALKLATECVCMILKIDDVVAV 504
K+VK+TG+ GRT TVLVRGSN+LVLDEAERS+HDALCVVR LV +RFLIAGGGAPE E++ L W+K GM +YCVR++AEALEVIPYTLAENAG+NPI++VTELR RH+ G + AGINVRK +++++ ENVVQP+LVS SA+ LATECV MILKIDD+V V
Sbjct: 332 KIVKITGIKDMGRTTTVLVRGSNQLVLDEAERSLHDALCVVRCLVNKRFLIAGGGAPEIELSRQLGAWAKVLHGMESYCVRSFAEALEVIPYTLAENAGLNPIAIVTELRNRHA-GGENNAGINVRKGQITNIWDENVVQPLLVSTSAITLATECVRMILKIDDIVTV 498
BLAST of mRNA_P-wetherbeei_contig13706.1.1 vs. uniprot
Match: W1P8J8_AMBTC (T-complex protein 1 subunit delta n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1P8J8_AMBTC) HSP 1 Score: 223 bits (568), Expect = 1.600e-67 Identity = 116/168 (69.05%), Postives = 140/168 (83.33%), Query Frame = 1
Query: 1 KVVKMTGVPHTGRTMTVLVRGSNRLVLDEAERSIHDALCVVRSLVKRRFLIAGGGAPEAEVATALAEWSKTQTGMRAYCVRAYAEALEVIPYTLAENAGMNPISLVTELRARHSVAGGSGAGINVRKATVSDMYAENVVQPMLVSMSALKLATECVCMILKIDDVVAV 504
K+VK+TG+ + GRT TVLVRGSN+LVLDEAERS+HDALCVVR LV +RFLIAGGGAPE E++ L W+K GM +YCVR++AEALEVIPYTLAENAG+NPIS+VTELR RH+ G AGINVRK ++++ ENVVQP+LVS SA+ LATECV MILKIDD++ V
Sbjct: 365 KIVKITGIKNMGRTATVLVRGSNQLVLDEAERSLHDALCVVRCLVNKRFLIAGGGAPEIEISRQLGAWAKVLQGMESYCVRSFAEALEVIPYTLAENAGLNPISIVTELRNRHA-QGEINAGINVRKGQITNILEENVVQPLLVSTSAISLATECVRMILKIDDIITV 531 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13706.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13706.1.1 >prot_P-wetherbeei_contig13706.1.1 ID=prot_P-wetherbeei_contig13706.1.1|Name=mRNA_P-wetherbeei_contig13706.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp MTGVPHTGRTMTVLVRGSNRLVLDEAERSIHDALCVVRSLVKRRFLIAGGback to top mRNA from alignment at P-wetherbeei_contig13706:339..1248+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13706.1.1 ID=mRNA_P-wetherbeei_contig13706.1.1|Name=mRNA_P-wetherbeei_contig13706.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=910bp|location=Sequence derived from alignment at P-wetherbeei_contig13706:339..1248+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13706:339..1248+ >mRNA_P-wetherbeei_contig13706.1.1 ID=mRNA_P-wetherbeei_contig13706.1.1|Name=mRNA_P-wetherbeei_contig13706.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig13706:339..1248+ (Phaeothamnion wetherbeei SAG_119_79)back to top |