mRNA_P-wetherbeei_contig10307.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10307.1.1
Unique NamemRNA_P-wetherbeei_contig10307.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A835Z5G4_9STRA (Farnesyl pyrophosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G4_9STRA)

HSP 1 Score: 378 bits (971), Expect = 4.370e-127
Identity = 173/244 (70.90%), Postives = 209/244 (85.66%), Query Frame = 1
Query:    4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735
            MNRG+GV+DVQ+AFA + GR LS  + CRA+VLGWCIE LQ+FFLVADDVMDDS TRRGQPCWYR+PH+K  A+ND+ I+ES+V++ L RHF  E +Y +++ELFH+VT++TEMGQLLDLTSQP DKPPD  RFT  RY MIV+YKTAFYTFYLPCAIG+IYA V+D  +F LAR ICC IGEYFQIQDD+LDCYGDP +IGKVGTDIQD KCSWLVVQAL+  +P+QR+ L+DNYG++D KK+
Sbjct:  208 MNRGLGVIDVQKAFATKSGRTLSNLEHCRAAVLGWCIEWLQAFFLVADDVMDDSHTRRGQPCWYRVPHVKQIAINDAFILESLVYRVLRRHFSQESYYLQLVELFHDVTYRTEMGQLLDLTSQPLDKPPDFARFTATRYAMIVKYKTAFYTFYLPCAIGMIYASVSDPSSFALARRICCIIGEYFQIQDDYLDCYGDPAVIGKVGTDIQDMKCSWLVVQALEKCTPEQRQQLMDNYGKNDPKKI 451          
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A835YUF9_9STRA (Farnesyl pyrophosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUF9_9STRA)

HSP 1 Score: 375 bits (962), Expect = 1.880e-126
Identity = 173/244 (70.90%), Postives = 204/244 (83.61%), Query Frame = 1
Query:    4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735
            MNRG+GV+DVQ+AFA   GR LS  + CRA+VLGWCIE LQ+FFLVADDVMDDS TRRGQPCW+R+PH+K  A+ND+ I+ES+VFK L RHF  E +Y ++MELFH+VT++TEMGQLLDLTSQP DKPPD  RFT  RY MIV+YKTAFYTFYLPCAIG+IYAGV+D  +F LAR ICC IGEYFQIQDD+LDCYGDP+ IGKVGTDIQD KCSWLVVQAL+  S  Q+  L+ NYG+ D +K+
Sbjct:  155 MNRGLGVIDVQKAFAKSSGRTLSHREHCRAAVLGWCIEWLQAFFLVADDVMDDSHTRRGQPCWFRVPHVKQIAINDAFILESLVFKVLNRHFSQESYYLQLMELFHDVTYRTEMGQLLDLTSQPLDKPPDFTRFTKTRYAMIVKYKTAFYTFYLPCAIGMIYAGVSDPSSFALARRICCTIGEYFQIQDDYLDCYGDPKFIGKVGTDIQDMKCSWLVVQALERCSAAQKDELIANYGKDDAEKI 398          
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: D8LGP5_ECTSI (Farnesyl pyrophosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP5_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 9.550e-125
Identity = 173/244 (70.90%), Postives = 205/244 (84.02%), Query Frame = 1
Query:    4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735
            MNRGMGVVDV RAFA   GREL  E+VCR S+LGWC+E LQ+FFLVADDVMD SLTRRGQPCWY++P ++  A+NDS I+E+ VFK L RHF HE +Y +++ELFH+VT++TEMGQLLDLTSQP D P DL RFT  RYRMIVRYKTA+YTFYLPCAIG+IYAGV D  +++LARDICC IGE+FQIQDD+LDC+GDPE+IGKVGTDIQDNKCSWLVVQAL+ AS  Q+ VL+ NY   +  K+
Sbjct:  202 MNRGMGVVDVLRAFAEANGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKVPKVQEIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPSDLTRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKVGTDIQDNKCSWLVVQALERASKAQKAVLIQNYAIDEEAKI 445          
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A6H5L554_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L554_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 4.120e-115
Identity = 170/257 (66.15%), Postives = 202/257 (78.60%), Query Frame = 1
Query:    4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRL---------PHIKLN----AVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735
            MNRGMGVVDV RAFA   GREL  E+VCR S+LGWC+E LQ+FFLVADDVMD SLTRRGQPCWY++         P  ++     A+NDS I+E+ VFK L RHF HE +Y +++ELFH+VT++TEMGQLLDLTSQP D P     FT  RYRMIVRYKTA+YTFYLPCAIG+IYAGV D  +++LARDICC IGE+FQIQDD+LDC+GDPE+IGKVGTDIQDNKCSWLVVQAL+ AS  Q+ VL+ NY   +  K+
Sbjct:  212 MNRGMGVVDVLRAFAEADGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKVGRQKQRQTHPEFRVTQSEIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAP-----FTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKVGTDIQDNKCSWLVVQALERASRAQKAVLIQNYAIDEEAKI 463          
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: W7TD59_9STRA (Farnesyl pyrophosphate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD59_9STRA)

HSP 1 Score: 338 bits (866), Expect = 1.030e-112
Identity = 162/244 (66.39%), Postives = 192/244 (78.69%), Query Frame = 1
Query:    4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735
            +NRG+ VV V+R   A +GR LS  +  RA+VLGWCIE LQ+FFLVADDVMDDS+TRRGQPCW+RLP +KL AVNDS I+ES VF+ L RHFGHEPFY  + +LF EVT QTE+GQLLDLTSQP D   DL RFT +RY++IV+YKTAFYTFYLP A GLI +G+        AR +C  +GEYFQ+QDD+LDCYGDP+LIGKVGTDIQDNKCSWLVVQAL  A+P QR VL  +YG+H+   V
Sbjct:   96 LNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSV 339          
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A7S3XXN8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXN8_HETAK)

HSP 1 Score: 333 bits (854), Expect = 7.300e-110
Identity = 155/245 (63.27%), Postives = 197/245 (80.41%), Query Frame = 1
Query:    4 MNRGMGVVDVQRAFAAQ-RGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735
            MNRG+ V  + R  A + +GR+L+  ++ RA VLGWCIE LQ+FFLVADD+MDDSLTRRGQPCWYR P +K+ A+NDS I+ES VF+ L +HFGHE  Y +++++FHEV +QTE+GQLLDLTSQP D P DL+RFT+ER+R+IV+YKTA+YTFYL  A+G+I +GV +   ++ A+ ICC IGEYFQIQDD+LDCYGDP +IGKVGTDIQDNKCSWLVVQAL  A P  RK+L +NYG+    K+
Sbjct:  184 MNRGLVVPAIMRTLARKNKGRDLTNTELARACVLGWCIEWLQAFFLVADDIMDDSLTRRGQPCWYRKPEVKMIAINDSFILESGVFRLLKKHFGHEETYSQILDVFHEVIYQTELGQLLDLTSQPLDGPTDLDRFTVERHRLIVKYKTAYYTFYLSTAMGMIDSGVTEPALYETAKRICCMIGEYFQIQDDYLDCYGDPAVIGKVGTDIQDNKCSWLVVQALAQAQPADRKLLKENYGKDSAAKI 428          
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A7S2JT51_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JT51_9STRA)

HSP 1 Score: 320 bits (821), Expect = 2.660e-106
Identity = 157/250 (62.80%), Postives = 191/250 (76.40%), Query Frame = 1
Query:    4 MNRGMGVVDVQRAFA-AQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQP-----HDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735
            +NRG+ V+ VQR    A  GREL+  +V RASVLGW +E LQ+FFLVADDVMDDS TRRGQPCWY+L  +   A+NDS ++ES  F  + +HFG EP+Y  ++ELF EV  QTE GQLLDLTSQP          DL+RFTLERY++IV+YKTAFYTFYL  AIG+I +GV D + + LA++ICC IGEYFQIQDD+LDCYGDP +IGKVGTDIQDNKCSWLVVQAL+    +Q+K+L +NYGQ D  KV
Sbjct:   62 LNRGVTVIAVQRTLVQANEGRELTDLEVARASVLGWAVEFLQAFFLVADDVMDDSQTRRGQPCWYKLAEVGNIAINDSFLLESFCFTMIKKHFGMEPYYGRLLELFLEVVQQTEFGQLLDLTSQPATASASSSKIDLSRFTLERYKLIVKYKTAFYTFYLSVAIGMITSGVTDPEAYSLAKEICCIIGEYFQIQDDYLDCYGDPAVIGKVGTDIQDNKCSWLVVQALERVDAEQKKLLEENYGQWDDDKV 311          
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: B7GA81_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GA81_PHATC)

HSP 1 Score: 319 bits (817), Expect = 5.240e-106
Identity = 157/249 (63.05%), Postives = 191/249 (76.71%), Query Frame = 1
Query:    4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQP---HDKPP--DLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735
            +NRG  V+DV R    +    L+  +  RA+VLGW IE LQ+FFLVADDVMDDS TRRGQPCWY+LP ++L A+NDS ++ES VF  L RHFGHEPFY  ++EL  +VT +TE+GQLLDLTSQP   HD+P   DL+RFTL RY+ IV+YKTAFY+FYLP A+G+I +GV D      AR ICC +GEYFQIQDD+LDC+GDP +IGKVGTDIQDNKCSWLVVQAL   +P QR VL ++YGQ D +KV
Sbjct:   43 LNRGTTVIDVYRVLLGKA--TLTPTETARAAVLGWAIEFLQAFFLVADDVMDDSQTRRGQPCWYKLPDVQLVAINDSFLLESFVFAILRRHFGHEPFYLHLLELMLDVTHKTELGQLLDLTSQPPQHHDQPHHVDLDRFTLTRYQQIVKYKTAFYSFYLPVAMGMILSGVTDAPALAQARTICCLMGEYFQIQDDYLDCFGDPAVIGKVGTDIQDNKCSWLVVQALARCTPAQRDVLQNHYGQSDDQKV 289          
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A7S3GWV7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWV7_9STRA)

HSP 1 Score: 323 bits (829), Expect = 1.030e-105
Identity = 153/244 (62.70%), Postives = 189/244 (77.46%), Query Frame = 1
Query:    4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735
            MNRG+  + V+   A   G  LS ++ C+A+ LGWCIE LQ+FFLVADD+MD+S+TRRGQPCW+RLP +K  AVNDS I+ES V+K L ++FG E +Y ++++LF E T QTE GQLLDLTSQ    P DLNRFT+ERY  IV+YKTAFY+FYLP A G+I AGV D   +  AR+I   +GEYFQIQDD+LDCYG PE+IGK+GTDIQDNKCSWL+VQALD A P QRKVL +NYG+H+  KV
Sbjct:  202 MNRGLATLSVRGTLAKLVGHTLSNKERCQAAALGWCIEFLQAFFLVADDLMDESVTRRGQPCWFRLPEVKTIAVNDSFILESFVYKILKKYFGEEAYYYQLVDLFLETTRQTEFGQLLDLTSQKLGAPIDLNRFTIERYTGIVKYKTAFYSFYLPVACGMIIAGVTDVHLYDTAREILVIMGEYFQIQDDYLDCYGTPEMIGKIGTDIQDNKCSWLIVQALDRADPKQRKVLEENYGRHEAAKV 445          
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A7S3V6T5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6T5_9STRA)

HSP 1 Score: 320 bits (819), Expect = 4.440e-105
Identity = 159/248 (64.11%), Postives = 191/248 (77.02%), Query Frame = 1
Query:    4 MNRGMGVVDVQRAFA-AQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPP-DLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKVTN 741
            +NRG+ VV V R    A  GR+L+  +V RASVLGW IE LQ+FFLVADDVMD S TRRGQPCWY+LP++K  A+NDS ++ES VF  L +HFG E +Y +++ELF +V  QTE GQLLDLTSQ       DL RFTLERY+ IV+YKTAFYTFYLP AIG+I + V +   + LA+ ICC +GEYFQIQDD+LDC+GDPE+IGKVGTDIQDNKCSWLVVQALD  +P+QR VL  NYGQ D +KV N
Sbjct:  133 LNRGVTVVAVHRTLVKANEGRDLTDIEVARASVLGWAIEFLQAFFLVADDVMDASKTRRGQPCWYKLPNVKNIAINDSFLLESYVFTMLKQHFGKEEYYLQLLELFLQVIQQTEFGQLLDLTSQDEGSEEIDLTRFTLERYQKIVKYKTAFYTFYLPVAIGMITSRVEEGPTYDLAKKICCQMGEYFQIQDDYLDCFGDPEVIGKVGTDIQDNKCSWLVVQALDRVTPEQRAVLEANYGQWDDQKVAN 380          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5G4_9STRA4.370e-12770.90Farnesyl pyrophosphate synthase n=1 Tax=Tribonema ... [more]
A0A835YUF9_9STRA1.880e-12670.90Farnesyl pyrophosphate synthase n=1 Tax=Tribonema ... [more]
D8LGP5_ECTSI9.550e-12570.90Farnesyl pyrophosphate synthase n=1 Tax=Ectocarpus... [more]
A0A6H5L554_9PHAE4.120e-11566.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TD59_9STRA1.030e-11266.39Farnesyl pyrophosphate synthase n=2 Tax=Monodopsid... [more]
A0A7S3XXN8_HETAK7.300e-11063.27Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2JT51_9STRA2.660e-10662.80Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B7GA81_PHATC5.240e-10663.05Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3GWV7_9STRA1.030e-10562.70Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3V6T5_9STRA4.440e-10564.11Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10307contigP-wetherbeei_contig10307:114..2002 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LGP5
Preferred nameFDPS
PFAMspolyprenyl_synt
Model size744
Max annot lvl2759|Eukaryota
KEGG rclassRC00279,RC00382
KEGG koko:K00787,ko:K05396,ko:K06220
KEGG ReactionR01658,R01874,R02003
KEGG Pathwayko00270,ko00900,ko01100,ko01110,ko01130,ko05164,ko05166,map00270,map00900,map01100,map01110,map01130,map05164,map05166
KEGG ModuleM00366,M00367
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004161,GO:0004337,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006066,GO:0006629,GO:0006644,GO:0006694,GO:0006695,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009889,GO:0009987,GO:0016114,GO:0016125,GO:0016126,GO:0016740,GO:0016765,GO:0019216,GO:0019218,GO:0019222,GO:0019637,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045337,GO:0045338,GO:0045540,GO:0046165,GO:0046890,GO:0050789,GO:0050810,GO:0062012,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090181,GO:0090407,GO:0106118,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
Exons5
Evalue1.51e-125
EggNOG OGsCOG0142@1|root,KOG0711@2759|Eukaryota
Ec32 ortholog descriptionFarnesyl pyrophosphate synthase
Ec32 orthologEc-10_003020.1
EC2.5.1.1,2.5.1.10,4.4.1.15
Descriptiondimethylallyltranstransferase activity
Cds size741
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000,ko01006
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10307.1.1prot_P-wetherbeei_contig10307.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10307 117..2002 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185862.897531-UTR-P-wetherbeei_contig10307:113..1161683185862.897531-UTR-P-wetherbeei_contig10307:113..116Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10307 114..116 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185862.9111829-CDS-P-wetherbeei_contig10307:116..2391683185862.9111829-CDS-P-wetherbeei_contig10307:116..239Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10307 117..239 +
1683185862.9183476-CDS-P-wetherbeei_contig10307:569..7041683185862.9183476-CDS-P-wetherbeei_contig10307:569..704Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10307 570..704 +
1683185862.925472-CDS-P-wetherbeei_contig10307:934..10741683185862.925472-CDS-P-wetherbeei_contig10307:934..1074Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10307 935..1074 +
1683185862.9328244-CDS-P-wetherbeei_contig10307:1352..15181683185862.9328244-CDS-P-wetherbeei_contig10307:1352..1518Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10307 1353..1518 +
1683185862.939991-CDS-P-wetherbeei_contig10307:1825..20021683185862.939991-CDS-P-wetherbeei_contig10307:1825..2002Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10307 1826..2002 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10307.1.1

>prot_P-wetherbeei_contig10307.1.1 ID=prot_P-wetherbeei_contig10307.1.1|Name=mRNA_P-wetherbeei_contig10307.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp
MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDV
MDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYRE
MMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFY
TFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPEL
IGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKVTN*
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mRNA from alignment at P-wetherbeei_contig10307:114..2002+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10307.1.1 ID=mRNA_P-wetherbeei_contig10307.1.1|Name=mRNA_P-wetherbeei_contig10307.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1889bp|location=Sequence derived from alignment at P-wetherbeei_contig10307:114..2002+ (Phaeothamnion wetherbeei SAG_119_79)
CAGATGAACCGCGGGATGGGCGTTGTGGACGTGCAGCGGGCCTTCGCTGC GCAGCGCGGGCGGGAGCTGTCGGTAGAAGACGTCTGCCGTGCCTCCGTCC TCGGGTGGTGCATCGAGATGCTGCAGGTACATCCTTCAATATCCTCTTTC CAGTACTGTTTCCCCCCTCTTGGAGCCGCGAGATGAATGCACTGCTGTTT CCGTTTGATCGCAGGTAGGGCTTTTTCTGAAATATCTTGTCGTCAGCTGC CGCCACCCTTCTGCCGTTCTCTGCTTTTTCCTATTGGCAATTCCGCCGCT CTTTTTTTGGTCTAAACTACCAGGATTACCCGCCAATTTTGCATATTTGG ACTGCAATGGCGTGTAACGGTTCCGCAACTGCCACGGCCGCACCCCGTCC ATTTGTCCGTGCTTTATCTGGTTCCGTTTCATACCTCTGCCTGTCCCGTC CGGCAGTCGTTCTTCCTGGTGGCAGACGACGTGATGGACGACTCGCTGAC GCGGCGCGGGCAGCCGTGCTGGTACCGCCTGCCGCACATCAAGCTCAACG CCGTTAACGACAGCCTCATCATTGAGTCCGTTGTCTTCAAGGTGAGACAG AGGCAGGCACACAGAGTGGGAGAAAGGAAAGCGAGGAAAGTGGGCTCGGT GTTTGGCGTTCCTTCATTTGACACCGGCTTTTGCTGGTCAGGTGCTGGGC TCGATCCGTCACCTCCAGCGGACCCGCCCCCGCCGCCCTTGCCGGCTCCT GGTCTCCGCCATTAACCACCTGGTTCCGCTCCGCTCTTCTTCCGTTCCCG TTTGCGGCTGCCATTTTCTAGACACTGATGCGTCACTTCGGGCACGAGCC CTTCTACCGGGAGATGATGGAGCTCTTCCACGAGGTGACATTCCAGACGG AGATGGGTCAGCTGCTCGACCTCACCTCGCAGCCCCACGACAAGCCCCCG GATCTCAACAGGTTCGTGTCGTTACGTTTCGGGTGATGTTCGTCTTGATA GGTGCTGGGAACTTGGGACGTAGCAGTTTTTCGACCATTCATTGGTCCGG AGGGCGATGTTACTGTATCCTCTCTCTTGCCGCGGCGTTGCAGGCTTTTC GTCTCTCGCAGCCTGTTTGTAAGCGGCTATTACAACCTGGCTTCCAAACG GCAGTTGTAAGAAACGGGCAAACCCGCAACACATTAACCACTCCCCAAAA TCCAACCCGATTAAACGGTCGCAATGCACTCATTGCCAGATTCACGCTGG AGCGGTACCGCATGATCGTGCGCTACAAGACGGCCTTCTATACCTTCTAC CTGCCATGTGCCATCGGACTCATTTACGCCGGAGTGGCGGACAAGAAGAA CTTCAAACTCGCGCGGGACATCTGCTGCGCCATCGGCGAGTACTTCCAGA TCCAGGTCAGTAAGGGTCAGATAGCACTCGTTTTCTGTGCATGGGGCGGC GGGAGCCATGGCGACATCACACACATCTATCGAGCGAGCTTTTCTCACCC AAGGGCCTGCTCCAACCGGTTATTTTCTATGGTAGCGTTTCCGCACGGCG CCGTTGCGCCGGAAGAAGAACTGAAAGAGAAACGTTAGAATATGAAAACC AATCGGCATGCTCCCATCCTTTCCTCTCACGCTGCTCTCCCTTCCTTCCC CGTCTCTTCCGCCTCTTATGCCTGTTAAAACGCTCCGCCCGGCTCTCCGT ACCCGGCAACAGGACGACTTCCTGGACTGCTATGGGGACCCGGAGCTGAT TGGCAAGGTGGGGACGGACATCCAGGACAATAAGTGCTCGTGGCTCGTGG TGCAGGCCCTCGACTGCGCCTCGCCCGACCAGCGCAAGGTCCTCGTCGAC AACTATGGCCAGCACGACCTCAAGAAGGTGACAAACTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10307:114..2002+

>mRNA_P-wetherbeei_contig10307.1.1 ID=mRNA_P-wetherbeei_contig10307.1.1|Name=mRNA_P-wetherbeei_contig10307.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig10307:114..2002+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACCGCGGGATGGGCGTTGTGGACGTGCAGCGGGCCTTCGCTGCGCA
GCGCGGGCGGGAGCTGTCGGTAGAAGACGTCTGCCGTGCCTCCGTCCTCG
GGTGGTGCATCGAGATGCTGCAGTCGTTCTTCCTGGTGGCAGACGACGTG
ATGGACGACTCGCTGACGCGGCGCGGGCAGCCGTGCTGGTACCGCCTGCC
GCACATCAAGCTCAACGCCGTTAACGACAGCCTCATCATTGAGTCCGTTG
TCTTCAAGACACTGATGCGTCACTTCGGGCACGAGCCCTTCTACCGGGAG
ATGATGGAGCTCTTCCACGAGGTGACATTCCAGACGGAGATGGGTCAGCT
GCTCGACCTCACCTCGCAGCCCCACGACAAGCCCCCGGATCTCAACAGAT
TCACGCTGGAGCGGTACCGCATGATCGTGCGCTACAAGACGGCCTTCTAT
ACCTTCTACCTGCCATGTGCCATCGGACTCATTTACGCCGGAGTGGCGGA
CAAGAAGAACTTCAAACTCGCGCGGGACATCTGCTGCGCCATCGGCGAGT
ACTTCCAGATCCAGGACGACTTCCTGGACTGCTATGGGGACCCGGAGCTG
ATTGGCAAGGTGGGGACGGACATCCAGGACAATAAGTGCTCGTGGCTCGT
GGTGCAGGCCCTCGACTGCGCCTCGCCCGACCAGCGCAAGGTCCTCGTCG
ACAACTATGGCCAGCACGACCTCAAGAAGGTGACAAACTAG
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