prot_P-wetherbeei_contig13689.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13689.1.1
Unique Nameprot_P-wetherbeei_contig13689.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length34
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig13689.1.1 vs. uniprot
Match: A0A2R5GCX2_9STRA (E3 ubiquitin-protein ligase HECTD3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCX2_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 4.360e-5
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 0 
Query:    1 MSHAEVPLDRWTHVALVADAGKLRLYLNGALDSQ 34
            +S   +PL+ WTHVA+V D GKLRL++NG LD Q
Sbjct: 2675 VSKDAIPLNAWTHVAIVMDQGKLRLFINGDLDGQ 2708
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13689.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2R5GCX2_9STRA4.360e-558.82E3 ubiquitin-protein ligase HECTD3 n=1 Tax=Hondaea... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13385Laminin_G_3coord: 2..32
e-value: 7.7E-8
score: 32.6
NoneNo IPR availableGENE3D2.60.120.200coord: 1..34
e-value: 3.7E-7
score: 32.2
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 2..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13689contigP-wetherbeei_contig13689:507..608 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13689.1.1mRNA_P-wetherbeei_contig13689.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13689 507..617 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13689.1.1 ID=prot_P-wetherbeei_contig13689.1.1|Name=mRNA_P-wetherbeei_contig13689.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=34bp
MSHAEVPLDRWTHVALVADAGKLRLYLNGALDSQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom_sf