mRNA_P-wetherbeei_contig13683.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13683.1.1
Unique NamemRNA_P-wetherbeei_contig13683.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13683.1.1 vs. uniprot
Match: A0A2R5GTY7_9STRA (Cytochrome P450 710A1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTY7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.450e-31
Identity = 61/138 (44.20%), Postives = 85/138 (61.59%), Query Frame = 1
Query:    1 LTFVKNCALEMLRFRPPVPMVPHLAKRRVELAPGIVVPKGAMVVPSVVGAAANEKNADVF--DPDNLVDPNFNKVFTFGAGQHKCPGRMYASQLLTVFIGVLASEYSWERRRTERSDNIIYAPTLFPEDNFYTFKKKA 408
            L +++  A+  L++RPPVPMVPH+A+   EL    +  KG +   SV+G+ AN + AD F  DPDN++DP F KV  FG G H CPGR YAS  + +F+  L   Y  +R R    ++IIY PTL+P D+ Y  K +A
Sbjct:  353 LPYLRAAAINQLQYRPPVPMVPHIARHDTELGDHKI-EKGTIAFASVMGSKANIEGADRFEPDPDNMLDPAFKKVLCFGGGPHMCPGRFYASNTVALFMATLVHGYDVDRIRKPGGEDIIYLPTLYPRDSLYVMKSRA 489          
BLAST of mRNA_P-wetherbeei_contig13683.1.1 vs. uniprot
Match: B7FW67_PHATC (Cytochrome P450 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FW67_PHATC)

HSP 1 Score: 118 bits (295), Expect = 2.060e-28
Identity = 64/139 (46.04%), Postives = 85/139 (61.15%), Query Frame = 1
Query:    1 LTFVKNCALEMLRFRPPVPMVPHLAKRRVELAPGIVVPKGAMVVPSVVGAAANEKNADVFDP-DNLVDPNFNKVFTFGAGQHKCPGRMYASQLLTVFIGVLASEYSWERRRTERS--DNIIYAPTLFPEDNFYTFKKKA 408
            L +V   A +ML  +PPVPM+PH+ KR V LA G  + KG +V+PS+  +A     +  F+P  +  D  F K  TFGAGQHKCPGR YA  LL VF+ VLA EY +ER   +R   D+ IY PT+FP D  +  +K+ 
Sbjct:  387 LVYVAKVANQMLHHKPPVPMIPHICKRNVTLA-GHALKKGTVVIPSITYSARVGGGSLEFNPLRDDADAQFVKTVTFGAGQHKCPGRKYAESLLNVFMAVLAQEYDFERVADQRPGVDDFIYFPTVFPTDTRFVIQKRV 524          
BLAST of mRNA_P-wetherbeei_contig13683.1.1 vs. uniprot
Match: S5RW69_TRYCR (C-22 sterol desaturase (Fragment) n=5 Tax=Trypanosoma cruzi TaxID=5693 RepID=S5RW69_TRYCR)

HSP 1 Score: 109 bits (272), Expect = 6.480e-27
Identity = 59/142 (41.55%), Postives = 79/142 (55.63%), Query Frame = 1
Query:    1 LTFVKNCALEMLRFRPPVPMVPHLAKRRVELAPGIVVPKGAMVVPSVVGAAANE-KNADVFDPDNL-----VDPNFNKVFT-FGAGQHKCPGRMYASQLLTVFIGVLASEYSWERRRTERSDNIIYAPTLFPEDNFYTFKKK 405
            +TF + C LE LR  PP PMVP  A     +     VPKG++++PS+VGA      N DV+DPD +      D  F K F  FG G H+C G  YA   LTV++ ++A    W R RT  SD +IY PTL+P D   T++ +
Sbjct:   92 MTFTRQCVLEQLRLFPPAPMVPMKAHSDFVIDGHYTVPKGSLIIPSLVGACREGFPNPDVYDPDRMGSERQEDRKFAKQFIPFGVGPHRCVGYNYAINHLTVYLALVARLAEWRRTRTPNSDKVIYLPTLYPHDCLCTWRHR 233          
BLAST of mRNA_P-wetherbeei_contig13683.1.1 vs. uniprot
Match: A0A836GRD9_9TRYP (Uncharacterized protein n=4 Tax=Leishmania TaxID=5658 RepID=A0A836GRD9_9TRYP)

HSP 1 Score: 112 bits (281), Expect = 1.660e-26
Identity = 59/143 (41.26%), Postives = 80/143 (55.94%), Query Frame = 1
Query:    1 LTFVKNCALEMLRFRPPVPMVPHLAKRRVELAPGIVVPKGAMVVPSVVGAAANE-KNADVFDPDNL-----VDPNFNKVFT-FGAGQHKCPGRMYASQLLTVFIGVLASEYSWERRRTERSDNIIYAPTLFPEDNFYTFKKKA 408
            +TF + C +E LR  PP PMVP  A R   L    VVPKG+M++PS+V        N D +DPD +      D  F K F  FG G H+C G  YA   LTV++ ++A    W+R RT  SD ++Y PTL+P D   T++ +A
Sbjct:  357 MTFTRQCVMEQLRLFPPAPMVPMKAHRDFRLDEKTVVPKGSMIIPSLVACCREGFTNPDTYDPDRMGPERQEDRKFAKQFIPFGVGPHRCVGYNYAINHLTVYLALIAHHLEWQRTRTPDSDKLLYLPTLYPHDCLQTWRYRA 499          
BLAST of mRNA_P-wetherbeei_contig13683.1.1 vs. uniprot
Match: A0A836IED9_9TRYP (Uncharacterized protein n=1 Tax=Porcisia hertigi TaxID=2761500 RepID=A0A836IED9_9TRYP)

HSP 1 Score: 112 bits (280), Expect = 2.290e-26
Identity = 60/140 (42.86%), Postives = 78/140 (55.71%), Query Frame = 1
Query:    1 LTFVKNCALEMLRFRPPVPMVPHLAKRRVELAPGIVVPKGAMVVPSVVGAAANE-KNADVFDPDNL-----VDPNFNKVF-TFGAGQHKCPGRMYASQLLTVFIGVLASEYSWERRRTERSDNIIYAPTLFPEDNFYTFK 399
            +TF + C +E LR  PP PMVP  A    +L    VVPKG+M++PS+V        N D +DPD +      D  F K F TFG G H+C G  YA   LTVF+ + A    W+R RT  SD I+Y PTL+P D   T++
Sbjct:  357 MTFTRQCVMEQLRLFPPAPMVPMKAHSDFQLDEKTVVPKGSMIIPSLVACCREGFTNPDTYDPDRMGPERQEDRKFAKQFLTFGVGPHRCVGYNYAINHLTVFLALFAHHTQWQRTRTPDSDKILYLPTLYPHDCLITWR 496          
BLAST of mRNA_P-wetherbeei_contig13683.1.1 vs. uniprot
Match: V5BSB7_TRYCR (Lanosterol 14-alpha-demethylase n=9 Tax=Trypanosoma cruzi TaxID=5693 RepID=V5BSB7_TRYCR)

HSP 1 Score: 109 bits (272), Expect = 2.910e-25
Identity = 59/142 (41.55%), Postives = 79/142 (55.63%), Query Frame = 1
Query:    1 LTFVKNCALEMLRFRPPVPMVPHLAKRRVELAPGIVVPKGAMVVPSVVGAAANE-KNADVFDPDNL-----VDPNFNKVFT-FGAGQHKCPGRMYASQLLTVFIGVLASEYSWERRRTERSDNIIYAPTLFPEDNFYTFKKK 405
            +TF + C LE LR  PP PMVP  A     +     VPKG++++PS+VGA      N DV+DPD +      D  F K F  FG G H+C G  YA   LTV++ ++A    W R RT  SD +IY PTL+P D   T++ +
Sbjct:  357 MTFTRQCVLEQLRLFPPAPMVPMKAHSDFVIDGHYTVPKGSLIIPSLVGACREGFPNPDVYDPDRMGSERQEDRKFAKQFIPFGVGPHRCVGYNYAINHLTVYLALVARLAEWRRTRTPNSDKVIYLPTLYPHDCLCTWRHR 498          
BLAST of mRNA_P-wetherbeei_contig13683.1.1 vs. uniprot
Match: A0A7G2CFV6_9TRYP (Cytochrome P450, putative n=1 Tax=Angomonas deanei TaxID=59799 RepID=A0A7G2CFV6_9TRYP)

HSP 1 Score: 108 bits (269), Expect = 7.660e-25
Identity = 57/140 (40.71%), Postives = 79/140 (56.43%), Query Frame = 1
Query:    1 LTFVKNCALEMLRFRPPVPMVPHLAKRRVELAPGIVVPKGAMVVPSVVGAAANE-KNADVFDPDNL-----VDPNFNKVFT-FGAGQHKCPGRMYASQLLTVFIGVLASEYSWERRRTERSDNIIYAPTLFPEDNFYTFK 399
            +TF + C +E LR  PP PMVP  A    +L    VVPKG+MV+PS+V        N D +DPD +      D  F K F  FG G H+C G  YA   LTV++ +++    W+R+RT  SD ++Y PTL+P D   T++
Sbjct:  357 MTFTRQCVMEQLRLYPPAPMVPMKAHSDFQLDEKTVVPKGSMVIPSLVACCREGFTNPDEYDPDRMGPERQEDRKFAKQFIPFGVGPHRCVGYNYAINHLTVYLAMISYYMEWDRKRTPDSDKVLYLPTLYPHDCLCTWR 496          
BLAST of mRNA_P-wetherbeei_contig13683.1.1 vs. uniprot
Match: E9B1C9_LEIMU (Cytochrome p450-like protein n=2 Tax=Leishmania TaxID=38568 RepID=E9B1C9_LEIMU)

HSP 1 Score: 107 bits (267), Expect = 1.480e-24
Identity = 55/138 (39.86%), Postives = 78/138 (56.52%), Query Frame = 1
Query:    7 FVKNCALEMLRFRPPVPMVPHLAKRRVELAPGIVVPKGAMVVPSVVGAAANE-KNADVFDPDNL-----VDPNFNKVFT-FGAGQHKCPGRMYASQLLTVFIGVLASEYSWERRRTERSDNIIYAPTLFPEDNFYTFK 399
            F + C +E LR  PP PMVP       +L    VVPKG+M++PS++        N D++DPD +      D  F K F  FG G H+C G  YA   LTV++ ++A +  W+R RT  SD I+Y PTL+P D  +T++
Sbjct:  359 FTRQCVMEQLRLFPPAPMVPMKVHSDFQLDEKTVVPKGSMIIPSLLACCREGFTNPDMYDPDRMGPERQEDRKFAKQFIPFGVGPHRCVGYNYAINHLTVYLALIAHDVDWQRTRTPDSDKILYLPTLYPHDCLHTWR 496          
BLAST of mRNA_P-wetherbeei_contig13683.1.1 vs. uniprot
Match: S9VFB8_9TRYP (Cytochrome p450-like protein n=2 Tax=Strigomonas culicis TaxID=28005 RepID=S9VFB8_9TRYP)

HSP 1 Score: 106 bits (265), Expect = 2.780e-24
Identity = 55/140 (39.29%), Postives = 77/140 (55.00%), Query Frame = 1
Query:    1 LTFVKNCALEMLRFRPPVPMVPHLAKRRVELAPGIVVPKGAMVVPSVVGAAANE-KNADVFDPDNL-----VDPNFNKVFT-FGAGQHKCPGRMYASQLLTVFIGVLASEYSWERRRTERSDNIIYAPTLFPEDNFYTFK 399
            +TF + C +E LR  PP PMVP  A    +L    ++PKG+M++PS+V        N D +DPD +      D  F K F  FG G H+C G  YA   LTVF+ +++    W R RT  SD ++Y PTL+P D   T++
Sbjct:  357 MTFTRQCVMEQLRLYPPAPMVPMKAHSDYQLDEKTLIPKGSMIIPSLVACCREGFSNPDHYDPDRMGPERQEDRKFAKQFIPFGVGPHRCVGYNYAINHLTVFLALISHHVEWSRTRTPDSDKVLYLPTLYPHDCLCTWR 496          
BLAST of mRNA_P-wetherbeei_contig13683.1.1 vs. uniprot
Match: A0A0M9G6L8_9TRYP (Cytochrome p450-like protein n=2 Tax=Leptomonas TaxID=5683 RepID=A0A0M9G6L8_9TRYP)

HSP 1 Score: 106 bits (265), Expect = 2.820e-24
Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 1
Query:    1 LTFVKNCALEMLRFRPPVPMVPHLAKRRVELAPGIVVPKGAMVVPSVVGAAANE-KNADVFDPDNL-----VDPNFNKVFT-FGAGQHKCPGRMYASQLLTVFIGVLASEYSWERRRTERSDNIIYAPTLFPEDNFYTFK 399
            + F + C +E LR  PP PMVP  A    +L    VVPKG+M++PS+V        N + +DPD +      D  F K F  FG G H+C G  YA   LTVF+ ++A    W+R RT  SD ++Y PTL+P D   T++
Sbjct:  357 MAFTRQCVMEQLRIFPPAPMVPMKAHSDFQLDDKTVVPKGSMIIPSLVACCREGFSNPEQYDPDRMGPERQEDRKFAKQFIPFGVGPHRCVGYNYAINHLTVFLALIAHHVEWQRTRTPDSDKVVYLPTLYPYDCLLTWR 496          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13683.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R5GTY7_9STRA4.450e-3144.20Cytochrome P450 710A1 n=1 Tax=Hondaea fermentalgia... [more]
B7FW67_PHATC2.060e-2846.04Cytochrome P450 n=1 Tax=Phaeodactylum tricornutum ... [more]
S5RW69_TRYCR6.480e-2741.55C-22 sterol desaturase (Fragment) n=5 Tax=Trypanos... [more]
A0A836GRD9_9TRYP1.660e-2641.26Uncharacterized protein n=4 Tax=Leishmania TaxID=5... [more]
A0A836IED9_9TRYP2.290e-2642.86Uncharacterized protein n=1 Tax=Porcisia hertigi T... [more]
V5BSB7_TRYCR2.910e-2541.55Lanosterol 14-alpha-demethylase n=9 Tax=Trypanosom... [more]
A0A7G2CFV6_9TRYP7.660e-2540.71Cytochrome P450, putative n=1 Tax=Angomonas deanei... [more]
E9B1C9_LEIMU1.480e-2439.86Cytochrome p450-like protein n=2 Tax=Leishmania Ta... [more]
S9VFB8_9TRYP2.780e-2439.29Cytochrome p450-like protein n=2 Tax=Strigomonas c... [more]
A0A0M9G6L8_9TRYP2.820e-2440.00Cytochrome p450-like protein n=2 Tax=Leptomonas Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13683contigP-wetherbeei_contig13683:373..1442 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr51757
Preferred nameERG5
PFAMsp450
Model size414
Max annot lvl2759|Eukaryota
KEGG rclassRC01886,RC01970
KEGG koko:K09831,ko:K09832
KEGG ReactionR07489,R07506,R11097
KEGG Pathwayko00100,ko01100,ko01110,ko01130,map00100,map01100,map01110,map01130
KEGG ModuleM00102
Hectar predicted targeting categorymitochondrion
GOsGO:0000249,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008610,GO:0009058,GO:0009987,GO:0012505,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016491,GO:0016705,GO:0016717,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0055114,GO:0070704,GO:0071704,GO:0097384,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653
Exons4
Evalue5.83e-28
EggNOG OGsCOG2124@1|root,KOG0157@2759|Eukaryota
EC1.14.19.41
Descriptioniron ion binding
Cds size384
COG categoryQ
BRITEko00000,ko00001,ko00002,ko00199,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185994.6786673-CDS-P-wetherbeei_contig13683:372..4721683185994.6786673-CDS-P-wetherbeei_contig13683:372..472Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13683 373..472 -
1683185994.690276-CDS-P-wetherbeei_contig13683:629..7271683185994.690276-CDS-P-wetherbeei_contig13683:629..727Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13683 630..727 -
1683185994.7013662-CDS-P-wetherbeei_contig13683:950..10861683185994.7013662-CDS-P-wetherbeei_contig13683:950..1086Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13683 951..1086 -
1683185994.7126403-CDS-P-wetherbeei_contig13683:1362..14121683185994.7126403-CDS-P-wetherbeei_contig13683:1362..1412Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13683 1363..1412 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185994.7236042-UTR-P-wetherbeei_contig13683:1412..14421683185994.7236042-UTR-P-wetherbeei_contig13683:1412..1442Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13683 1413..1442 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13683.1.1prot_P-wetherbeei_contig13683.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13683 373..1412 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13683.1.1

>prot_P-wetherbeei_contig13683.1.1 ID=prot_P-wetherbeei_contig13683.1.1|Name=mRNA_P-wetherbeei_contig13683.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=128bp
MLRFRPPVPMVPHLAKRRVELAPGIVVPKGAMVVPSVVGAAANEKNADVF
DPDNLVDPNFNKVFTFGAGQHKCPGRMYASQLLTVFIGVLASEYSWERRR
TERSDNIIYAPTLFPEDNFYTFKKKAC*
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mRNA from alignment at P-wetherbeei_contig13683:373..1442-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13683.1.1 ID=mRNA_P-wetherbeei_contig13683.1.1|Name=mRNA_P-wetherbeei_contig13683.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1070bp|location=Sequence derived from alignment at P-wetherbeei_contig13683:373..1442- (Phaeothamnion wetherbeei SAG_119_79)
CTGACGTTTGTGAAGAACTGCGCGCTGGAGATGCTGCGCTTCCGCCCACC GGTACCCATGGTACCGCACCTCGCCAAGCGGTGAGAAAAAGCAGAGAAGG AGGGACATGCGTTGGGGGAGAGAGTTGGCGCTTTGTCTCTTTCTTTCAAA GGCCCAGGTTTCAAAGCCCAGGGTTCAGTGGCGTTGCCGTGACGGGACCG ATGTCGGAGCCTACCAATAGAAGAAGCTGTAGTGTATGGCTTGCTGCTGA GCAAACTTGCTTTCTCCCCAGTTTCTGACACGATCTGCTCAATTTTCTAC CGTTCGCTTCTTGCTTGCTCCCCCCCCCTCCACTCACCGCCGCCGTTTCC GGCCAGGCGCGTAGAACTGGCGCCGGGCATCGTGGTGCCGAAGGGCGCCA TGGTGGTGCCAAGCGTGGTCGGCGCTGCCGCCAACGAGAAGAACGCCGAC GTCTTCGACCCCGACAACCTTGTCGACCCCAACTTCAACAAGGTAAAAGA AGTTTTCTATTTTTCGAGGAATTTTGTGGAATGAGACAAAGAAATTTCTG GACGTCGAGGTTCCTCATGACCGTTAGAGGGGGTTACCTCCTTTGCCCTG AGAGGCTTGCTTTGAAGTCCGGCAATCATTTGCTGTGTGGTATTGTTATT GGCTTCACTTCTTCCCCCCATTTCCCGTTTCTCCACCTGTCGATCGTTAA TCCATAAATCCACAGGTGTTTACTTTCGGTGCGGGACAGCACAAGTGTCC CGGCCGGATGTACGCGTCGCAGCTCCTCACCGTCTTCATCGGCGTCCTCG CCAGCGAGTACAGGTGAGAAAGCTACTCAACTTTACTTGCAAGGTTTGGT GAGCTACTGGATTTCGATGCTCACGTACACCGCTTGCCATTAGCGCTTCC TCCTGTTGCCTGCTTATGATTATCTGAATTGCTGTTCTTCGCCGCTTTTT GTCCATTACGTGTCGCACAGCTGGGAGCGGCGGCGGACGGAGCGGAGTGA CAACATCATTTACGCCCCAACCCTCTTCCCCGAAGACAACTTCTACACCT TTAAGAAGAAGGCTTGCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13683:373..1442-

>mRNA_P-wetherbeei_contig13683.1.1 ID=mRNA_P-wetherbeei_contig13683.1.1|Name=mRNA_P-wetherbeei_contig13683.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig13683:373..1442- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCGCTTCCGCCCACCGGTACCCATGGTACCGCACCTCGCCAAGCG
GCGCGTAGAACTGGCGCCGGGCATCGTGGTGCCGAAGGGCGCCATGGTGG
TGCCAAGCGTGGTCGGCGCTGCCGCCAACGAGAAGAACGCCGACGTCTTC
GACCCCGACAACCTTGTCGACCCCAACTTCAACAAGGTGTTTACTTTCGG
TGCGGGACAGCACAAGTGTCCCGGCCGGATGTACGCGTCGCAGCTCCTCA
CCGTCTTCATCGGCGTCCTCGCCAGCGAGTACAGCTGGGAGCGGCGGCGG
ACGGAGCGGAGTGACAACATCATTTACGCCCCAACCCTCTTCCCCGAAGA
CAACTTCTACACCTTTAAGAAGAAGGCTTGCTAG
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