mRNA_P-wetherbeei_contig13654.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13654.2.1
Unique NamemRNA_P-wetherbeei_contig13654.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13654.2.1 vs. uniprot
Match: A0A6A7LZ25_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7LZ25_9PROT)

HSP 1 Score: 170 bits (431), Expect = 3.220e-50
Identity = 87/154 (56.49%), Postives = 107/154 (69.48%), Query Frame = 1
Query:   28 AIYLLSFWHYGIYFLASYFAAVTLRVVKRDAILMKSVSLAALLSVYVNCPPNALSIGVVAAGFLLNTAGALALGSDRTYYGQEIENLPYRKITSFPYSVMPHPMLAGNIMAFGGTMINADFAREWWPLASTHVALNLGLLQLENCLSASRRNTV 489
            AIYLLSFWHY +Y+LA  F  V   V KRDA+ MK+VS+AAL  VY+  P + +S+ V+A G LLN   A ALG DRTYYG E+  LP R+IT+FPYS+  HPM+ GN+ AFGGT+IN  F  +WWPLA  H+ LNLGLL +E      RR TV
Sbjct:   44 AIYLLSFWHYVLYWLAFAFGRVAFDVFKRDAVAMKTVSVAALAFVYLRAPIDPVSLAVIAGGILLNVRAAAALGLDRTYYGHEVGGLPPRRITAFPYSLTSHPMILGNVAAFGGTLINGSFREQWWPLAVLHIVLNLGLLAME-LAGPRRRRTV 196          
BLAST of mRNA_P-wetherbeei_contig13654.2.1 vs. uniprot
Match: A0A512NQL4_9HYPH (Uncharacterized protein n=2 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NQL4_9HYPH)

HSP 1 Score: 170 bits (430), Expect = 1.040e-49
Identity = 85/177 (48.02%), Postives = 116/177 (65.54%), Query Frame = 1
Query:    1 AEIWKQSGSAIYLLSFWHYGIYFLASYFAAVTLRVVKRDAILMKSVSLAALLSVYVNCPPNALSIGVVAAGFLLNTAGALALGSDRTYYGQEIENLPYRKITSFPYSVMPHPMLAGNIMAFGGTMINADFAREWWPLASTHVALNLGLLQLENCLSASRRNTVGAHAPAIEFHSSVI 531
            A + +    A+YLLSFWHY +Y+LA  F A+   V KRDA+ MK+VS+A L +VY+  P + +S+ V+A G LLN   A+ LG DRTYYG E+  LP R+IT+FPYS++ HPM+ GN+ AFGGT+IN  F  +WWPLA  HV LN+GLL +E           GAH  A+    +++
Sbjct:   25 AALERSPPLAVYLLSFWHYYLYWLAFAFGAIPFEVFKRDAVAMKAVSVAVLAAVYLAAPIDLVSLVVIAGGILLNVRAAMVLGVDRTYYGHEVAGLPPRRITAFPYSLIGHPMIVGNVAAFGGTLINPAFREQWWPLAGLHVTLNIGLLAME---------LTGAHRRAVRIGGALV 192          
BLAST of mRNA_P-wetherbeei_contig13654.2.1 vs. uniprot
Match: A0A6N6ZS08_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N6ZS08_9PROT)

HSP 1 Score: 169 bits (428), Expect = 1.420e-49
Identity = 83/152 (54.61%), Postives = 110/152 (72.37%), Query Frame = 1
Query:    1 AEIWKQSGSAIYLLSFWHYGIYFLASYFAAVTLRVVKRDAILMKSVSLAALLSVYVNCPPNALSIGVVAAGFLLNTAGALALGSDRTYYGQEIENLPYRKITSFPYSVMPHPMLAGNIMAFGGTMINADFAREWWPLASTHVALNLGLLQLE 456
            A I ++   AIYL SF +YG Y+ A  +   +    KRDA+L+K+VS+AAL  VY+  PP+ LS+GV+A G LLNT  A  LG DRTYYG+E+  LP R++T+FPYS+M HPM+ GN+MAFGGT++N  F   WWPLA+ HVALN+GLL +E
Sbjct:   41 AAIGREPAVAIYLASFVYYGFYWQAFAWGVDSFDAFKRDAMLLKAVSVAALAFVYLQAPPDLLSLGVIALGILLNTRAAAVLGIDRTYYGRELAGLPARRVTAFPYSLMSHPMIVGNVMAFGGTLLNPAFRAAWWPLAALHVALNIGLLAME 192          
BLAST of mRNA_P-wetherbeei_contig13654.2.1 vs. uniprot
Match: A0A521R0J5_9HYPH (Uncharacterized protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521R0J5_9HYPH)

HSP 1 Score: 168 bits (426), Expect = 2.190e-49
Identity = 82/152 (53.95%), Postives = 109/152 (71.71%), Query Frame = 1
Query:    1 AEIWKQSGSAIYLLSFWHYGIYFLASYFAAVTLRVVKRDAILMKSVSLAALLSVYVNCPPNALSIGVVAAGFLLNTAGALALGSDRTYYGQEIENLPYRKITSFPYSVMPHPMLAGNIMAFGGTMINADFAREWWPLASTHVALNLGLLQLE 456
            A I ++   AIYL SF +YG+Y+ A  +   +  V KRDA+L+K+VS+AAL  VY+  PP+ LS+GV+  G LLN   A  LG DRTYYG E+  LP R++T+FPYS+M HPM+AGN+MAFGGT++N  F   WWPLA+ HV LN+GLL +E
Sbjct:   28 AAIGREPAVAIYLASFVYYGLYWYAFAWGVRSFEVFKRDAMLLKAVSVAALAFVYLQAPPDLLSLGVITLGILLNARAAAVLGIDRTYYGHELAGLPARRVTAFPYSLMSHPMIAGNVMAFGGTLLNPAFRAAWWPLAALHVLLNIGLLAME 179          
BLAST of mRNA_P-wetherbeei_contig13654.2.1 vs. uniprot
Match: A0A1F3ADM1_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F3ADM1_9PROT)

HSP 1 Score: 168 bits (425), Expect = 4.540e-49
Identity = 84/151 (55.63%), Postives = 108/151 (71.52%), Query Frame = 1
Query:   28 AIYLLSFWHYGIYFLASYFAAVTLRVVKRDAILMKSVSLAALLSVYVNCPPNALSIGVVAAGFLLNTAGALALGSDRTYYGQEIENLPYRKITSFPYSVMPHPMLAGNIMAFGGTMINADFAREWWPLASTHVALNLGLLQLENCLSASRR 480
            A++LLSFWHY +Y+LA  F AV   V KRDA+ MK+VS+AAL +VY+  P +  S+ V+A G LLN   A  LG DRTYYG E+  LP R++T FPYS++ HPM+ GN+ AFGGT+IN  FA +WWPL   HVALN+GLL +E  L+  RR
Sbjct:   34 AVWLLSFWHYYLYWLAFAFGAVPFDVFKRDAVAMKAVSVAALSAVYLAAPLDLASLAVIAGGILLNVRAASVLGFDRTYYGHEVAGLPPRRVTEFPYSLVAHPMIVGNVAAFGGTLINPAFAEQWWPLVGLHVALNIGLLAME--LAGPRR 182          
BLAST of mRNA_P-wetherbeei_contig13654.2.1 vs. uniprot
Match: A0A259MSZ4_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259MSZ4_9PROT)

HSP 1 Score: 163 bits (412), Expect = 3.700e-47
Identity = 80/152 (52.63%), Postives = 106/152 (69.74%), Query Frame = 1
Query:    1 AEIWKQSGSAIYLLSFWHYGIYFLASYFAAVTLRVVKRDAILMKSVSLAALLSVYVNCPPNALSIGVVAAGFLLNTAGALALGSDRTYYGQEIENLPYRKITSFPYSVMPHPMLAGNIMAFGGTMINADFAREWWPLASTHVALNLGLLQLE 456
            A I ++   AIYL+SF +YG+Y+ A  +   +  V KRDA+L+K++S+AAL  VY+  PP+ LS+G +A G LLN   A  LG DRTYYG E+  LP R IT FPYS+M HPM+ GN+MAFGGT++N  F   WWPLA+ HV LN+ LL +E
Sbjct:   41 AAIGREPALAIYLVSFVYYGLYWYAFAWGVDSFDVFKRDALLLKALSVAALAFVYLQAPPDILSLGTIALGILLNARAAAVLGIDRTYYGHELAGLPARHITEFPYSLMSHPMIVGNVMAFGGTLLNPAFRAAWWPLAALHVVLNIALLAME 192          
BLAST of mRNA_P-wetherbeei_contig13654.2.1 vs. uniprot
Match: A0A1H3UC11_9ACTN (Phospholipid methyltransferase n=1 Tax=Asanoa ishikariensis TaxID=137265 RepID=A0A1H3UC11_9ACTN)

HSP 1 Score: 106 bits (264), Expect = 2.470e-23
Identity = 59/133 (44.36%), Postives = 75/133 (56.39%), Query Frame = 1
Query:   31 IYLLSFWHYGIYFLASYFAAVTLRVVKRDAILMKSVSLAALLSVYVNCPPNALSIGVVAAGFLLNTAGALALGSDRTYYGQEIENLPYRKITSFPYSVMPHPMLAGNIMAFGGTMINADFAREWWPLASTHVA 429
            +YL SF HY +YF+A  F AV      RDA L + V+L  L   Y     +A S+ V A GF L     L LGSDRTY+G E   +P  K+  FPY V+PHPM+ G ++ F G  ++A F   WWPL   HVA
Sbjct:  259 VYLFSFVHYFLYFVAHLFRAVEPGRFARDATLFQLVALGTLFYQYGRTGFDAPSLAVAALGFGLTGLAFLRLGSDRTYFGAEFGVVPPGKVAGFPYGVIPHPMIVGKLVGFAGLALHAPFRAAWWPLLLAHVA 391          
BLAST of mRNA_P-wetherbeei_contig13654.2.1 vs. uniprot
Match: A6G4L1_9DELT (Uncharacterized protein n=2 Tax=Plesiocystis pacifica TaxID=191768 RepID=A6G4L1_9DELT)

HSP 1 Score: 80.9 bits (198), Expect = 1.890e-14
Identity = 52/138 (37.68%), Postives = 82/138 (59.42%), Query Frame = 1
Query:   43 SFWHYGIYFLASYFA-AVTLRVVKRDAILMKSVSLAALLSVYVNCPP----NALSIGVVAAGFLLNTAGALALGSDRTYYGQEIENLPYRKITSFPYSVMPHPMLAGNIMAFGGTMINADFAREWWP-LASTHVALNL 438
            SF HY +Y    +   +++    KRDA+L ++V+ A LL +YV+       N LS+G++  G+ L +A   ALG D+TY+G E+  +  R++TSFPY+V+PHPM+ G ++A  G  ++    RE  P L   H+A  L
Sbjct:  434 SFVHYLLYIAVFHLRESISFGEFKRDALLFRTVAHAMLLGLYVSTIASHGINWLSLGLILGGYGLASAATYALGLDQTYFGVELGQVQPRRVTSFPYNVVPHPMIVGTLVALVGYYVHGPM-RELAPWLVPMHIAFYL 570          
BLAST of mRNA_P-wetherbeei_contig13654.2.1 vs. uniprot
Match: A0A7S2DDC3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDC3_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 6.090e-11
Identity = 40/120 (33.33%), Postives = 66/120 (55.00%), Query Frame = 1
Query:  109 KRDAILMKSVSLAALLSVYVNCP--------PNALSIGVVAAGFLLNTAGALALGSDRTYYGQEIENLP--YRKITSFPYSVMPHPMLAGNIMAFGGTMINADFAREWWPLASTHVALNL 438
            KRD +L K+V+L  L  +Y+           P+ +S+ ++A G+ ++ A   ALG D TY+G E+ ++   Y  +  FPY+V+PHPM+ G + A  G    A   ++W  +   H+AL L
Sbjct:   57 KRDVLLFKTVALCNLGYIYLKPYVLNGFSGFPDIISLAMIAVGYYISIAATQALGIDGTYFGIELGHVKAEYTFVKDFPYNVIPHPMILGQVFALLGLFKPAHVHQDWPWVIPVHIALYL 176          
BLAST of mRNA_P-wetherbeei_contig13654.2.1 vs. uniprot
Match: A0A7S2RE14_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RE14_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.610e-10
Identity = 39/120 (32.50%), Postives = 65/120 (54.17%), Query Frame = 1
Query:  109 KRDAILMKSVSLAALLSVYVNCP--------PNALSIGVVAAGFLLNTAGALALGSDRTYYGQEIE--NLPYRKITSFPYSVMPHPMLAGNIMAFGGTMINADFAREWWPLASTHVALNL 438
            +RD +L KS +L  L  +Y+           P+ +S+ ++A+G+ ++ A   ALG D TY+G E+      Y  +T+FPY+V+PHPM+ G +    G +      +EW  L + H+ L L
Sbjct:    6 QRDVLLFKSFALCHLGYIYLKPYYEAGWDGFPDYISLAMIASGYFVSIAATQALGIDGTYFGIELGFVKADYCFVTNFPYNVIPHPMILGQVFGLLGVLKVPHVYQEWHWLIAGHILLYL 125          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13654.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6A7LZ25_9PROT3.220e-5056.49Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
A0A512NQL4_9HYPH1.040e-4948.02Uncharacterized protein n=2 Tax=Reyranella soli Ta... [more]
A0A6N6ZS08_9PROT1.420e-4954.61Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A521R0J5_9HYPH2.190e-4953.95Uncharacterized protein n=1 Tax=Reyranella sp. Tax... [more]
A0A1F3ADM1_9PROT4.540e-4955.63Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A259MSZ4_9PROT3.700e-4752.63Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
A0A1H3UC11_9ACTN2.470e-2344.36Phospholipid methyltransferase n=1 Tax=Asanoa ishi... [more]
A6G4L1_9DELT1.890e-1437.68Uncharacterized protein n=2 Tax=Plesiocystis pacif... [more]
A0A7S2DDC3_9STRA6.090e-1133.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2RE14_9STRA3.610e-1032.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13654contigP-wetherbeei_contig13654:1246..1807 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog81824.XP_001748740.1
PFAMsPEMT
Model size562
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
Exons1
Evalue1.44e-12
EggNOG OGs28Q2P@1|root,2QWRE@2759|Eukaryota
Ec32 ortholog descriptionphospholipidmethyltransferase
Ec32 orthologEc-08_004940.1
DescriptionPhospholipid methyltransferase
Cds size561
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185994.1548667-CDS-P-wetherbeei_contig13654:1246..18071683185994.1548667-CDS-P-wetherbeei_contig13654:1246..1807Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13654 1247..1807 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13654.2.1prot_P-wetherbeei_contig13654.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13654 1247..1807 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13654.2.1

>prot_P-wetherbeei_contig13654.2.1 ID=prot_P-wetherbeei_contig13654.2.1|Name=mRNA_P-wetherbeei_contig13654.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp
AEIWKQSGSAIYLLSFWHYGIYFLASYFAAVTLRVVKRDAILMKSVSLAA
LLSVYVNCPPNALSIGVVAAGFLLNTAGALALGSDRTYYGQEIENLPYRK
ITSFPYSVMPHPMLAGNIMAFGGTMINADFAREWWPLASTHVALNLGLLQ
LENCLSASRRNTVGAHAPAIEFHSSVISIAFTTILVS
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mRNA from alignment at P-wetherbeei_contig13654:1246..1807-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13654.2.1 ID=mRNA_P-wetherbeei_contig13654.2.1|Name=mRNA_P-wetherbeei_contig13654.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=562bp|location=Sequence derived from alignment at P-wetherbeei_contig13654:1246..1807- (Phaeothamnion wetherbeei SAG_119_79)
GCGGAGATCTGGAAGCAGTCGGGCAGCGCCATCTATCTGCTGAGCTTCTG GCACTATGGCATATACTTCCTCGCCTCATATTTTGCCGCCGTGACGCTTC GCGTCGTAAAGCGCGACGCGATACTGATGAAGTCCGTTTCACTTGCCGCG CTGCTCAGCGTGTATGTGAATTGTCCGCCGAATGCGTTGTCCATCGGCGT GGTGGCTGCCGGATTTCTGCTGAACACGGCAGGTGCGTTGGCACTGGGGT CCGACCGAACCTACTACGGCCAGGAGATAGAGAACCTTCCGTATCGCAAG ATCACTTCATTTCCGTATTCCGTGATGCCTCACCCGATGCTCGCTGGTAA TATCATGGCTTTTGGCGGCACCATGATAAACGCGGATTTTGCCAGGGAGT GGTGGCCTTTGGCCAGCACCCACGTCGCGCTGAATCTGGGGCTGCTTCAG TTGGAAAATTGTCTCTCCGCGAGCCGGCGGAATACCGTCGGCGCACATGC ACCCGCAATCGAGTTTCATAGTTCCGTTATCTCGATCGCCTTCACCACAA TACTGGTATCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13654:1246..1807-

>mRNA_P-wetherbeei_contig13654.2.1 ID=mRNA_P-wetherbeei_contig13654.2.1|Name=mRNA_P-wetherbeei_contig13654.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=561bp|location=Sequence derived from alignment at P-wetherbeei_contig13654:1246..1807- (Phaeothamnion wetherbeei SAG_119_79)
GCGGAGATCTGGAAGCAGTCGGGCAGCGCCATCTATCTGCTGAGCTTCTG
GCACTATGGCATATACTTCCTCGCCTCATATTTTGCCGCCGTGACGCTTC
GCGTCGTAAAGCGCGACGCGATACTGATGAAGTCCGTTTCACTTGCCGCG
CTGCTCAGCGTGTATGTGAATTGTCCGCCGAATGCGTTGTCCATCGGCGT
GGTGGCTGCCGGATTTCTGCTGAACACGGCAGGTGCGTTGGCACTGGGGT
CCGACCGAACCTACTACGGCCAGGAGATAGAGAACCTTCCGTATCGCAAG
ATCACTTCATTTCCGTATTCCGTGATGCCTCACCCGATGCTCGCTGGTAA
TATCATGGCTTTTGGCGGCACCATGATAAACGCGGATTTTGCCAGGGAGT
GGTGGCCTTTGGCCAGCACCCACGTCGCGCTGAATCTGGGGCTGCTTCAG
TTGGAAAATTGTCTCTCCGCGAGCCGGCGGAATACCGTCGGCGCACATGC
ACCCGCAATCGAGTTTCATAGTTCCGTTATCTCGATCGCCTTCACCACAA
TACTGGTATCG
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