mRNA_P-wetherbeei_contig13651.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13651.1.1
Unique NamemRNA_P-wetherbeei_contig13651.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13651.1.1 vs. uniprot
Match: A0A7K1B3F0_9ACTN (Proteasome accessory factor PafA2 n=2 Tax=root TaxID=1 RepID=A0A7K1B3F0_9ACTN)

HSP 1 Score: 657 bits (1694), Expect = 3.070e-234
Identity = 319/406 (78.57%), Postives = 354/406 (87.19%), Query Frame = 1
Query:    1 AHPEVSTPECLDAREVVRFDRAGEEIVRASMVAASSMLATGAELICHKNNSDGKGNSYGCHENYLLAREVPFGRIVAQVTPHFVTRQIVIGAGKVGCELPGVQASEIPFQISQRADFFEEEVGLETTLKRPIINTRDEPHCDASKYRRLHVIVGDANMSEVATYVKVGATALVLAMIEDDALGDDWVLANPVAAIRQVSHDTSLTRTILLRSGRRATALEVQWGLYERARKYERSHGLSAVGEDVGVEVLGWWETILSGLERDRSTVAHVVDWVAKERLVQGYQERHNVRDGDARLKALDLQYHDMRPDKCLARRVGLVTMAGDDEVREAMTQPPTTTRAYFRGRCLAKWPNDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTAESVARLIDESNTPAELLARLGA 1218
            AHPE+STPEC DA EVV FDRA EEIVR SMVAA  ML  GAE++CHKNNSDGKGNSYGCHENYL++RE PFGRIVAQ+TPHFVTRQ+V+GAGKVGCELPG  A ++PFQ+SQRADFFEEEVGLETTLKRPI+NTRDEPHCDASKYRRLHVIVGDANMSEVATYVKVGATA+VLAMIEDD LGDD VLANPV AIR +SHD +L R++ LRSG R TA+E+QW L ERARKYERSHGL AVG++VG +VL  WE IL+GLE D  +VA VVDWVAK RLV+G+  RH  R GDARLKALDLQYHDMRP++ LA +VGL T+A  D VR+A+T PPTTTRAYFRGRCL KWP DIVAANWDSLVFDVGRDPLRRVPMMEPLRGTA+ VA LI +S+T AELLARLGA
Sbjct:   93 AHPEISTPECRDALEVVTFDRAAEEIVRMSMVAARQMLPDGAEILCHKNNSDGKGNSYGCHENYLMSRETPFGRIVAQITPHFVTRQVVVGAGKVGCELPGASADDVPFQLSQRADFFEEEVGLETTLKRPIVNTRDEPHCDASKYRRLHVIVGDANMSEVATYVKVGATAIVLAMIEDDVLGDDLVLANPVGAIRAISHDPTLQRSVALRSGARMTAMEIQWSLLERARKYERSHGLEAVGDEVGADVLRRWEEILTGLEHDPDSVADVVDWVAKRRLVEGFAARHGARPGDARLKALDLQYHDMRPERSLAAKVGLRTVADPDAVRQAITDPPTTTRAYFRGRCLQKWPTDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTADHVASLIADSDTAAELLARLGA 498          
BLAST of mRNA_P-wetherbeei_contig13651.1.1 vs. uniprot
Match: A0A3C2B1R2_9ACTN (Proteasome accessory factor PafA2 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B1R2_9ACTN)

HSP 1 Score: 655 bits (1690), Expect = 1.200e-233
Identity = 318/406 (78.33%), Postives = 355/406 (87.44%), Query Frame = 1
Query:    1 AHPEVSTPECLDAREVVRFDRAGEEIVRASMVAASSMLATGAELICHKNNSDGKGNSYGCHENYLLAREVPFGRIVAQVTPHFVTRQIVIGAGKVGCELPGVQASEIPFQISQRADFFEEEVGLETTLKRPIINTRDEPHCDASKYRRLHVIVGDANMSEVATYVKVGATALVLAMIEDDALGDDWVLANPVAAIRQVSHDTSLTRTILLRSGRRATALEVQWGLYERARKYERSHGLSAVGEDVGVEVLGWWETILSGLERDRSTVAHVVDWVAKERLVQGYQERHNVRDGDARLKALDLQYHDMRPDKCLARRVGLVTMAGDDEVREAMTQPPTTTRAYFRGRCLAKWPNDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTAESVARLIDESNTPAELLARLGA 1218
            AHPE+STPECL A + + FDRA EEIV+ASM AA+ +L  GAE++CHKNNSDGKGNSYGCHENYL+AREVPF RIVAQ+TPHFVTRQ+V+GAGKVGCELPG  AS++PFQ+SQRADFFEEEVGLETTLKRPI+NTRDEPHCDASKYRRLHVIVGDANMSE AT VKVGATALVLAMIEDD LGDD  LANPVAAIRQVSHD +L RTILLR+G R TAL+VQW L+ERA+ Y  SHGL  VGE  G +VL  WE +L+GLERD ++VAH VDWVAK RLV+G+ ERH    GDARLKALDLQYHD+RP KCLARRVGL  +   D+VR A T+PPTTTRAYFRGRCLAKWPNDIVAANWDS+VFDVGRDPLRRVPM+EPLRGTA +VA LID+S+TPAELLARLGA
Sbjct:   92 AHPEISTPECLTAFDALVFDRAAEEIVQASMAAAARLLPEGAEILCHKNNSDGKGNSYGCHENYLVAREVPFPRIVAQITPHFVTRQVVVGAGKVGCELPGSSASDVPFQLSQRADFFEEEVGLETTLKRPIVNTRDEPHCDASKYRRLHVIVGDANMSETATLVKVGATALVLAMIEDDVLGDDLALANPVAAIRQVSHDPTLRRTILLRNGSRLTALQVQWRLFERAKAYAGSHGLEPVGEATGTQVLALWEQLLTGLERDPNSVAHQVDWVAKRRLVEGFAERHGAHPGDARLKALDLQYHDLRPGKCLARRVGLDVLVNPDDVRRATTEPPTTTRAYFRGRCLAKWPNDIVAANWDSMVFDVGRDPLRRVPMVEPLRGTAAAVASLIDQSDTPAELLARLGA 497          
BLAST of mRNA_P-wetherbeei_contig13651.1.1 vs. uniprot
Match: A0A539E2E6_9ACTN (Dop n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E2E6_9ACTN)

HSP 1 Score: 654 bits (1688), Expect = 2.510e-233
Identity = 320/406 (78.82%), Postives = 353/406 (86.95%), Query Frame = 1
Query:    1 AHPEVSTPECLDAREVVRFDRAGEEIVRASMVAASSMLATGAELICHKNNSDGKGNSYGCHENYLLAREVPFGRIVAQVTPHFVTRQIVIGAGKVGCELPGVQASEIPFQISQRADFFEEEVGLETTLKRPIINTRDEPHCDASKYRRLHVIVGDANMSEVATYVKVGATALVLAMIEDDALGDDWVLANPVAAIRQVSHDTSLTRTILLRSGRRATALEVQWGLYERARKYERSHGLSAVGEDVGVEVLGWWETILSGLERDRSTVAHVVDWVAKERLVQGYQERHNVRDGDARLKALDLQYHDMRPDKCLARRVGLVTMAGDDEVREAMTQPPTTTRAYFRGRCLAKWPNDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTAESVARLIDESNTPAELLARLGA 1218
            AHPEVSTPEC DA EVV FDRAGEEIVRASMVAA  ML   A+++CHKNNSDGKGNSYGCHENYL+AR+ PFGRIV QVT HFVTRQIV+GAGKVGCELPGV   E+P+QISQRADFFEEEVGLETTLKRPI+NTRDEPHCDASKYRRLHVIVGDANMSEVAT +KVGATA+VLAMIEDD LGDD +LANPV AIRQVSHD SL RT+LLRSGRRATA+E+QW L ERARKYERS GL +VGE VG +VL  WE +L+GLE D  +VA+ VDWVAK RLV G+ +RH +R GD RLKALDLQYHDMRPDKCLARRVGL T+  D +V  AM +PP +TRAYFRGRCL KWP+DIVAANWDSLVFDVGRDPLRRVPMMEPLRGTA+ VARLID+S + A+LL RL A
Sbjct:   93 AHPEVSTPECRDALEVVAFDRAGEEIVRASMVAARQMLPDDADVLCHKNNSDGKGNSYGCHENYLMARDTPFGRIVGQVTAHFVTRQIVVGAGKVGCELPGVPHDEVPYQISQRADFFEEEVGLETTLKRPIVNTRDEPHCDASKYRRLHVIVGDANMSEVATLLKVGATAIVLAMIEDDQLGDDLLLANPVGAIRQVSHDPSLQRTVLLRSGRRATAIEIQWSLLERARKYERSQGLESVGEQVGADVLNRWEAVLTGLEHDVDSVANFVDWVAKRRLVDGFADRHVLRPGDPRLKALDLQYHDMRPDKCLARRVGLATLVSDADVERAMIEPPNSTRAYFRGRCLQKWPDDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTADHVARLIDDSTSAADLLNRLDA 498          
BLAST of mRNA_P-wetherbeei_contig13651.1.1 vs. uniprot
Match: A0A7X9KN59_9ACTN (Proteasome accessory factor PafA2 n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KN59_9ACTN)

HSP 1 Score: 648 bits (1672), Expect = 6.810e-231
Identity = 317/406 (78.08%), Postives = 351/406 (86.45%), Query Frame = 1
Query:    1 AHPEVSTPECLDAREVVRFDRAGEEIVRASMVAASSMLATGAELICHKNNSDGKGNSYGCHENYLLAREVPFGRIVAQVTPHFVTRQIVIGAGKVGCELPGVQASEIPFQISQRADFFEEEVGLETTLKRPIINTRDEPHCDASKYRRLHVIVGDANMSEVATYVKVGATALVLAMIEDDALGDDWVLANPVAAIRQVSHDTSLTRTILLRSGRRATALEVQWGLYERARKYERSHGLSAVGEDVGVEVLGWWETILSGLERDRSTVAHVVDWVAKERLVQGYQERHNVRDGDARLKALDLQYHDMRPDKCLARRVGLVTMAGDDEVREAMTQPPTTTRAYFRGRCLAKWPNDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTAESVARLIDESNTPAELLARLGA 1218
            AHPE+STPEC  A E + FDRA EEIV ASM AA++ML  GAE++CHKNNSDGKGNSYGCHENYL+AREVPFGRIV QVTPHFVTRQIV+GAGKVGCE PG+  +++P+QISQRADFFEEEVGLETTLKRPI+NTRDEPHCD SKYRRLHVIVGDANMSE AT VK+GATA+VLAMIEDD +GD+ VLANPVAAIR VSHD SL RT+LLRSG+RATALE+QW + E A KYE+SHGL  VG DVG +VL  WE+IL+GLE D  TVAH VDWVAK R+V+ Y +RH  R  DARLKALDLQYHD+RPDKCLARRVGL  +     V +AMT PP TTRAYFRGRCLAKWP  IVAANWDSLVFDVGRDPLRRVPMMEPLRGTA+SVARLIDES+TPAELLARLGA
Sbjct:   93 AHPEISTPECRTAFEALVFDRAAEEIVWASMQAATAMLPAGAEVLCHKNNSDGKGNSYGCHENYLVAREVPFGRIVQQVTPHFVTRQIVVGAGKVGCETPGISVTDVPYQISQRADFFEEEVGLETTLKRPIVNTRDEPHCDPSKYRRLHVIVGDANMSETATLVKLGATAIVLAMIEDDVMGDELVLANPVAAIRHVSHDPSLQRTVLLRSGQRATALEIQWRVLELALKYEQSHGLEPVGHDVGRQVLSLWESILAGLEHDPETVAHQVDWVAKRRIVRAYAQRHQARPDDARLKALDLQYHDLRPDKCLARRVGLDVLTTSAAVHDAMTNPPLTTRAYFRGRCLAKWPGQIVAANWDSLVFDVGRDPLRRVPMMEPLRGTADSVARLIDESDTPAELLARLGA 498          
BLAST of mRNA_P-wetherbeei_contig13651.1.1 vs. uniprot
Match: A0A6I3EXW0_9ACTN (Proteasome accessory factor PafA2 n=2 Tax=root TaxID=1 RepID=A0A6I3EXW0_9ACTN)

HSP 1 Score: 638 bits (1645), Expect = 8.710e-227
Identity = 311/406 (76.60%), Postives = 346/406 (85.22%), Query Frame = 1
Query:    1 AHPEVSTPECLDAREVVRFDRAGEEIVRASMVAASSMLATGAELICHKNNSDGKGNSYGCHENYLLAREVPFGRIVAQVTPHFVTRQIVIGAGKVGCELPGVQASEIPFQISQRADFFEEEVGLETTLKRPIINTRDEPHCDASKYRRLHVIVGDANMSEVATYVKVGATALVLAMIEDDALGDDWVLANPVAAIRQVSHDTSLTRTILLRSGRRATALEVQWGLYERARKYERSHGLSAVGEDVGVEVLGWWETILSGLERDRSTVAHVVDWVAKERLVQGYQERHNVRDGDARLKALDLQYHDMRPDKCLARRVGLVTMAGDDEVREAMTQPPTTTRAYFRGRCLAKWPNDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTAESVARLIDESNTPAELLARLGA 1218
            AHPE+STPECL ARE + FDRA EEIVRASM AA SML  GAE++CHKNNSDGKGNSYGCHENYL+AR+VPF RIV Q+TPHFV+RQ+V+GAGKVGCE+PG++  E+PFQISQRADFFEEEVGLETT KRPI+NTRDEPHCD +KYRRLHVIVGDANMSE AT VK+G TALVLAMIEDD LGDD  LANPV AIR+VSHD SL RT+ LR GRR TALE+QW L+ +A KY RS+GLSAVGE+VG EVL  WE+IL+GLERD  +VAH VDWVAK R+V  Y ERH VR GD RLKALDLQYHD+R  KCLA RVGL  +A   +VR AMT+PP TTRAYFRGRCLAKWP+ I AANWDS+VFD GR PLRRVPMMEPLRGTAE VA LIDES TPAELLARLG+
Sbjct:   93 AHPEISTPECLTAREALVFDRAAEEIVRASMAAADSMLPAGAEILCHKNNSDGKGNSYGCHENYLVARDVPFNRIVRQITPHFVSRQVVVGAGKVGCEVPGMRNHEVPFQISQRADFFEEEVGLETTFKRPIVNTRDEPHCDPNKYRRLHVIVGDANMSETATLVKLGVTALVLAMIEDDELGDDLTLANPVQAIREVSHDPSLRRTVSLRDGRRMTALEMQWSLFAKATKYARSYGLSAVGEEVGAEVLVLWESILAGLERDPDSVAHQVDWVAKRRIVDAYAERHGVRPGDPRLKALDLQYHDLRAGKCLATRVGLDVLADITDVRRAMTEPPVTTRAYFRGRCLAKWPDQIAAANWDSIVFDAGRGPLRRVPMMEPLRGTAEYVASLIDESATPAELLARLGS 498          
BLAST of mRNA_P-wetherbeei_contig13651.1.1 vs. uniprot
Match: A0A6N2DN72_9ACTN (Proteasome accessory factor PafA2 (Fragment) n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DN72_9ACTN)

HSP 1 Score: 616 bits (1589), Expect = 1.370e-219
Identity = 299/405 (73.83%), Postives = 346/405 (85.43%), Query Frame = 1
Query:    1 AHPEVSTPECLDAREVVRFDRAGEEIVRASMVAASSMLATGAELICHKNNSDGKGNSYGCHENYLLAREVPFGRIVAQVTPHFVTRQIVIGAGKVGCELPGVQASEIPFQISQRADFFEEEVGLETTLKRPIINTRDEPHCDASKYRRLHVIVGDANMSEVATYVKVGATALVLAMIEDDALGDDWVLANPVAAIRQVSHDTSLTRTILLRSGRRATALEVQWGLYERARKYERSHGLSAVGEDVGVEVLGWWETILSGLERDRSTVAHVVDWVAKERLVQGYQERHNVRDGDARLKALDLQYHDMRPDKCLARRVGLVTMAGDDEVREAMTQPPTTTRAYFRGRCLAKWPNDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTAESVARLIDESNTPAELLARLG 1215
            AHPE+S PE   A E VR+DRA EEI+R SM  A S+L  G E++ HKNNSDGKGNSYGCHENYL++RE PFGRIV+Q+TPHFVTRQ+  GAGKVGCEL G    ++P+Q+SQRADFFEEEVGLETTLKRPI+NTRDEPHCD  KYRRLHVIVGDANMSEVATY+KVG +A+VLAMIED ALGD+W L NPVAAIRQVSHD SLTRTI+LR GRRATALE+Q+GL ERARKYERSHGL AVGE VG +VL  WE +L+GLER+ ++++H VDWVAK+RLV GY  RH+VR G A+LKA+DLQYHD+R ++CLA R GL T+    +V  A+T PPTTTRAYFRGRCLAK+P+DIVAANWDSLVFD+GRDPLRRVPMMEPLRGTA+ VARLIDES+T +ELL RLG
Sbjct:    9 AHPEISIPEVTTALEAVRWDRAAEEIIRRSMRHARSVLPDGGEIVIHKNNSDGKGNSYGCHENYLMSRETPFGRIVSQITPHFVTRQVFCGAGKVGCELSGRADDDVPYQLSQRADFFEEEVGLETTLKRPIVNTRDEPHCDPQKYRRLHVIVGDANMSEVATYLKVGTSAIVLAMIEDGALGDEWELGNPVAAIRQVSHDPSLTRTIMLRDGRRATALEIQFGLLERARKYERSHGLVAVGETVGADVLDRWEQVLTGLEREPASMSHWVDWVAKQRLVDGYAHRHDVRPGAAKLKAIDLQYHDLRTERCLALRAGLDTLIDPADVDTAVTAPPTTTRAYFRGRCLAKYPDDIVAANWDSLVFDIGRDPLRRVPMMEPLRGTADHVARLIDESDTASELLERLG 413          
BLAST of mRNA_P-wetherbeei_contig13651.1.1 vs. uniprot
Match: A0A7W1CNI0_9ACTN (Proteasome accessory factor PafA2 n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1CNI0_9ACTN)

HSP 1 Score: 610 bits (1574), Expect = 6.280e-216
Identity = 301/410 (73.41%), Postives = 341/410 (83.17%), Query Frame = 1
Query:    1 AHPEVSTPECLDAREVVRFDRAGEEIVRASMVAASSMLATGA----ELICHKNNSDGKGNSYGCHENYLLAREVPFGRIVAQVTPHFVTRQIVIGAGKVGCELPGVQASEIPFQISQRADFFEEEVGLETTLKRPIINTRDEPHCDASKYRRLHVIVGDANMSEVATYVKVGATALVLAMIEDDALGDDWVLANPVAAIRQVSHDTSLTRTILLRSGRRATALEVQWGLYERARKYERSHGLSAVGEDVGVEVLGWWETILSGLERDRSTVAHVVDWVAKERLVQGYQERHNVRDGDARLKALDLQYHDMRPDKCLARRVGLVTMAGDDEVREAMTQPPTTTRAYFRGRCLAKWPNDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTAESVARLIDESNTPAELLARLGA 1218
            AHPE+STPE   A E V FDRA EEIVR SM  A+  L   +    E++ +KNNSDGKGNSYGCHENYLLARE PFGRIVAQV+PHFVTRQ+  GAGKVGCELPGV   ++P+Q+SQRADFFEEEVGLETTLKRPI+NTRDEPHCDA KYRRLHVIVGDANMSEVATY+KVG TA+VLAMIEDDALG+DW+LANPV AIR VSHD +L RT++LR GRRATALEVQ+GL ERA KYE+SHGL+ V E VG +VL  WE +L+GLERD S+VA  VDWVAK RLV GY  RH V  G  RLKA+DLQYHDMRPD+ LA R GL T+   D V  AMT+PPTTTRAYFRGRCLAK+P++IVAANWDS+VFD+GR+PLRRVPMMEPLRGTA+ VARLIDES+   ELL RLG+
Sbjct:   93 AHPEISTPEVTTALEAVCFDRAAEEIVRRSMALATLKLVAASAGRPEVVVYKNNSDGKGNSYGCHENYLLARETPFGRIVAQVSPHFVTRQVFCGAGKVGCELPGVPDDDVPYQLSQRADFFEEEVGLETTLKRPIVNTRDEPHCDAQKYRRLHVIVGDANMSEVATYLKVGTTAIVLAMIEDDALGEDWLLANPVPAIRHVSHDPTLRRTVVLRDGRRATALEVQFGLLERATKYEQSHGLACVDESVGADVLARWERVLAGLERDPSSVADTVDWVAKRRLVDGYAARHGVTPGAPRLKAIDLQYHDMRPDRGLAARAGLATLVDADAVERAMTEPPTTTRAYFRGRCLAKYPDEIVAANWDSMVFDIGREPLRRVPMMEPLRGTADHVARLIDESDRAVELLERLGS 502          
BLAST of mRNA_P-wetherbeei_contig13651.1.1 vs. uniprot
Match: A0A6I3WS12_9ACTN (Proteasome accessory factor PafA2 n=2 Tax=root TaxID=1 RepID=A0A6I3WS12_9ACTN)

HSP 1 Score: 608 bits (1569), Expect = 2.720e-215
Identity = 289/406 (71.18%), Postives = 343/406 (84.48%), Query Frame = 1
Query:    1 AHPEVSTPECLDAREVVRFDRAGEEIVRASMVAASSMLATGAELICHKNNSDGKGNSYGCHENYLLAREVPFGRIVAQVTPHFVTRQIVIGAGKVGCELPGVQASEIPFQISQRADFFEEEVGLETTLKRPIINTRDEPHCDASKYRRLHVIVGDANMSEVATYVKVGATALVLAMIEDDALGDDWVLANPVAAIRQVSHDTSLTRTILLRSGRRATALEVQWGLYERARKYERSHGLSAVGEDVGVEVLGWWETILSGLERDRSTVAHVVDWVAKERLVQGYQERHNVRDGDARLKALDLQYHDMRPDKCLARRVGLVTMAGDDEVREAMTQPPTTTRAYFRGRCLAKWPNDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTAESVARLIDESNTPAELLARLGA 1218
            AHPEVSTPEC++A EVVRFDRA EEI+RASM+AA  +L  G+E++ +KNNSDGKGNSYGCHENYL+ R  PF RIV+Q+TPHFV+RQ+  GAGKVG EL G  ++ +P+QISQRADFFEEEVGLETTLKRPI+NTRDEPHCDA KYRRLHVIVGDANMSEVATY+KVG TA+VLAMIEDD +G D  LANPV+AIRQ+SHD SLTRT+LLR GRR TALE+QW L+ERAR YERSHGL+ VGE +  +++  WE +L+GL  DR++VAH VDWVAK RL++G+ +RH +   DARLKALDLQYHDMR ++CLA R+GL  +   D+VR AMT+PP TTRAYFRG CL +WP+ IVAANWDS+VFD+GR+PLRRVPMMEPLRGTAE VA L D+  T AELLARLG+
Sbjct:   89 AHPEVSTPECVNALEVVRFDRAAEEIIRASMLAARRLLNDGSEIVTYKNNSDGKGNSYGCHENYLVDRSTPFARIVSQITPHFVSRQVFCGAGKVGSELAGTSSTAVPYQISQRADFFEEEVGLETTLKRPIVNTRDEPHCDAQKYRRLHVIVGDANMSEVATYLKVGTTAIVLAMIEDDQIGTDLTLANPVSAIRQISHDPSLTRTVLLRDGRRLTALELQWSLFERARTYERSHGLACVGESIASDLMARWEAVLTGLGTDRASVAHWVDWVAKARLIEGFADRHGLSADDARLKALDLQYHDMRAERCLANRMGLEVLISHDDVRTAMTEPPQTTRAYFRGTCLQRWPDQIVAANWDSMVFDIGREPLRRVPMMEPLRGTAEHVAALFDQCATAAELLARLGS 494          
BLAST of mRNA_P-wetherbeei_contig13651.1.1 vs. uniprot
Match: A0A7V9II28_9ACTN (Proteasome accessory factor PafA2 n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9II28_9ACTN)

HSP 1 Score: 606 bits (1563), Expect = 2.650e-214
Identity = 296/406 (72.91%), Postives = 337/406 (83.00%), Query Frame = 1
Query:    1 AHPEVSTPECLDAREVVRFDRAGEEIVRASMVAASSMLATGAELICHKNNSDGKGNSYGCHENYLLAREVPFGRIVAQVTPHFVTRQIVIGAGKVGCELPGVQASEIPFQISQRADFFEEEVGLETTLKRPIINTRDEPHCDASKYRRLHVIVGDANMSEVATYVKVGATALVLAMIEDDALGDDWVLANPVAAIRQVSHDTSLTRTILLRSGRRATALEVQWGLYERARKYERSHGLSAVGEDVGVEVLGWWETILSGLERDRSTVAHVVDWVAKERLVQGYQERHNVRDGDARLKALDLQYHDMRPDKCLARRVGLVTMAGDDEVREAMTQPPTTTRAYFRGRCLAKWPNDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTAESVARLIDESNTPAELLARLGA 1218
            AHPE+STPE LDAR+ VRFDRA EEIVR SM  A  +L  GAE++ +KNNSDGKGNSYGCHENYLLAR VPFG+IV QVTPHFVTRQ+  GAGKVGCEL G   + +P+Q+SQRADFFEEEVGLETT+KRPIINTRDEPHCD  KYRRLHVIVGDANMSEVATY+KVG T++VLAMIEDD LGD+W LANPVAAIR+VSHD  L   I L+SG RATALEVQWGL ERARKYE SHGL AV E+VG +VL  WE +L+ LE D  +VA  VDWVAK R+V GY++RH++  GD RLKA+DLQYHD+R D+CLA R GL T+ G DEV  A+T+PPT TRAYFRGRCLAK+ + IVAANWDSLVFD+G +PLRRVPMMEP RGTAE VA LID S+T AELL RLG+
Sbjct:   94 AHPEISTPEVLDARQAVRFDRASEEIVRRSMTLAKRLLPDGAEIVVYKNNSDGKGNSYGCHENYLLARSVPFGQIVRQVTPHFVTRQVFCGAGKVGCELSGADPASVPYQLSQRADFFEEEVGLETTIKRPIINTRDEPHCDPKKYRRLHVIVGDANMSEVATYLKVGTTSIVLAMIEDDVLGDEWTLANPVAAIRRVSHDPGLNVAIRLQSGVRATALEVQWGLLERARKYELSHGLGAVDEEVGADVLRRWEHVLTALEADPDSVADTVDWVAKRRIVDGYRDRHSLAPGDLRLKAIDLQYHDLRADRCLAARAGLATLIGADEVESAITEPPTGTRAYFRGRCLAKFGDSIVAANWDSLVFDLGDEPLRRVPMMEPSRGTAEHVASLIDSSDTAAELLERLGS 499          
BLAST of mRNA_P-wetherbeei_contig13651.1.1 vs. uniprot
Match: A0A7K0VJ28_9ACTN (Proteasome accessory factor PafA2 n=2 Tax=root TaxID=1 RepID=A0A7K0VJ28_9ACTN)

HSP 1 Score: 605 bits (1561), Expect = 4.470e-214
Identity = 292/406 (71.92%), Postives = 341/406 (83.99%), Query Frame = 1
Query:    1 AHPEVSTPECLDAREVVRFDRAGEEIVRASMVAASSMLATGAELICHKNNSDGKGNSYGCHENYLLAREVPFGRIVAQVTPHFVTRQIVIGAGKVGCELPGVQASEIPFQISQRADFFEEEVGLETTLKRPIINTRDEPHCDASKYRRLHVIVGDANMSEVATYVKVGATALVLAMIEDDALGDDWVLANPVAAIRQVSHDTSLTRTILLRSGRRATALEVQWGLYERARKYERSHGLSAVGEDVGVEVLGWWETILSGLERDRSTVAHVVDWVAKERLVQGYQERHNVRDGDARLKALDLQYHDMRPDKCLARRVGLVTMAGDDEVREAMTQPPTTTRAYFRGRCLAKWPNDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTAESVARLIDESNTPAELLARLGA 1218
            AHPEVSTPECL A EVVRFDRA EEIVRASM AA  +L  G+E++ +KNNSDGKGNSYGCHENYL+ R  PF RIV+Q+TPHFV+RQ+  GAGKVG EL G  +S +P+QISQRADFFEEEVGLETTLKRPI+NTRDEPHCD  KYRRLHVIVGDANMSEVATY+KVG TA+VLAMIEDD +G +  LANPV+AIRQVS D SLT TI LR G R TA+E+QW L ERARKYERSHGL+ VG+DV V++L  WET+L+GLE DR++VAH VDWVAK+RLV G+ +RH +   DA+LKA+DLQYHDMR D+CLA RVGL T+  + +VR AMT+PP +TRAYFRG+CL +WP++IVAANWDS+VFDVGR+PLRRVPM+EPLRGTA+ V  L DE  T AELLARL A
Sbjct:   89 AHPEVSTPECLTALEVVRFDRAAEEIVRASMAAAKRLLNDGSEIVTYKNNSDGKGNSYGCHENYLVDRATPFARIVSQITPHFVSRQVFCGAGKVGSELAGTSSSSVPYQISQRADFFEEEVGLETTLKRPIVNTRDEPHCDPQKYRRLHVIVGDANMSEVATYLKVGTTAIVLAMIEDDMIGSELTLANPVSAIRQVSQDPSLTTTIALRDGTRLTAIELQWVLLERARKYERSHGLACVGDDVAVDLLARWETVLAGLESDRNSVAHWVDWVAKQRLVDGFADRHQLSPSDAKLKAIDLQYHDMRADRCLATRVGLETLISEHDVRTAMTEPPESTRAYFRGKCLQRWPSEIVAANWDSMVFDVGREPLRRVPMLEPLRGTAKLVGALFDECTTAAELLARLDA 494          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13651.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1B3F0_9ACTN3.070e-23478.57Proteasome accessory factor PafA2 n=2 Tax=root Tax... [more]
A0A3C2B1R2_9ACTN1.200e-23378.33Proteasome accessory factor PafA2 n=1 Tax=Acidimic... [more]
A0A539E2E6_9ACTN2.510e-23378.82Dop n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024... [more]
A0A7X9KN59_9ACTN6.810e-23178.08Proteasome accessory factor PafA2 n=2 Tax=Actinoba... [more]
A0A6I3EXW0_9ACTN8.710e-22776.60Proteasome accessory factor PafA2 n=2 Tax=root Tax... [more]
A0A6N2DN72_9ACTN1.370e-21973.83Proteasome accessory factor PafA2 (Fragment) n=1 T... [more]
A0A7W1CNI0_9ACTN6.280e-21673.41Proteasome accessory factor PafA2 n=1 Tax=Acidimic... [more]
A0A6I3WS12_9ACTN2.720e-21571.18Proteasome accessory factor PafA2 n=2 Tax=root Tax... [more]
A0A7V9II28_9ACTN2.650e-21472.91Proteasome accessory factor PafA2 n=2 Tax=Acidimic... [more]
A0A7K0VJ28_9ACTN4.470e-21471.92Proteasome accessory factor PafA2 n=2 Tax=root Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13651contigP-wetherbeei_contig13651:1..1221 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1313172.YM304_26070
Preferred namedop
PFAMsPup_ligase
Model size1221
Max annot lvl84992|Acidimicrobiia
KEGG koko:K20814
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.72e-213
EggNOG OGsCOG4122@1|root,COG4122@2|Bacteria,2GJGI@201174|Actinobacteria,4CMSZ@84992|Acidimicrobiia
EC3.5.1.119
DescriptionPup-ligase protein
Cds size1221
COG categoryS
BRITEko00000,ko01000,ko03051
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185994.003779-CDS-P-wetherbeei_contig13651:0..12211683185994.003779-CDS-P-wetherbeei_contig13651:0..1221Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13651 1..1221 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13651.1.1prot_P-wetherbeei_contig13651.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13651 1..1221 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13651.1.1

>prot_P-wetherbeei_contig13651.1.1 ID=prot_P-wetherbeei_contig13651.1.1|Name=mRNA_P-wetherbeei_contig13651.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=407bp
AHPEVSTPECLDAREVVRFDRAGEEIVRASMVAASSMLATGAELICHKNN
SDGKGNSYGCHENYLLAREVPFGRIVAQVTPHFVTRQIVIGAGKVGCELP
GVQASEIPFQISQRADFFEEEVGLETTLKRPIINTRDEPHCDASKYRRLH
VIVGDANMSEVATYVKVGATALVLAMIEDDALGDDWVLANPVAAIRQVSH
DTSLTRTILLRSGRRATALEVQWGLYERARKYERSHGLSAVGEDVGVEVL
GWWETILSGLERDRSTVAHVVDWVAKERLVQGYQERHNVRDGDARLKALD
LQYHDMRPDKCLARRVGLVTMAGDDEVREAMTQPPTTTRAYFRGRCLAKW
PNDIVAANWDSLVFDVGRDPLRRVPMMEPLRGTAESVARLIDESNTPAEL
LARLGA*
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mRNA from alignment at P-wetherbeei_contig13651:1..1221+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13651.1.1 ID=mRNA_P-wetherbeei_contig13651.1.1|Name=mRNA_P-wetherbeei_contig13651.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1221bp|location=Sequence derived from alignment at P-wetherbeei_contig13651:1..1221+ (Phaeothamnion wetherbeei SAG_119_79)
GCCCACCCGGAGGTCAGCACGCCGGAGTGCCTCGACGCGCGCGAGGTGGT TCGCTTCGATCGCGCCGGTGAGGAGATCGTGCGCGCCAGCATGGTGGCCG CGTCCTCGATGCTCGCCACCGGCGCCGAACTGATCTGCCACAAGAACAAC TCCGACGGCAAGGGCAACAGCTACGGCTGCCACGAGAACTACCTGCTGGC CCGCGAGGTGCCGTTCGGCCGGATCGTCGCCCAGGTCACCCCGCACTTCG TCACCCGCCAGATCGTCATCGGCGCCGGCAAGGTCGGCTGCGAGCTGCCC GGCGTGCAGGCGAGCGAGATCCCGTTCCAGATCAGCCAGCGCGCCGACTT CTTCGAGGAGGAGGTCGGGCTGGAGACCACGTTGAAGCGCCCGATCATCA ACACGCGCGACGAGCCGCACTGCGACGCGTCGAAGTACCGACGGCTGCAC GTGATCGTCGGCGACGCGAACATGAGCGAGGTGGCCACCTACGTCAAGGT CGGGGCCACCGCGCTGGTTCTGGCGATGATCGAGGACGACGCGCTCGGCG ACGACTGGGTGCTGGCGAACCCCGTGGCGGCCATCCGACAGGTCAGCCAC GACACCTCGCTGACGCGCACGATCCTGCTGCGCAGCGGTCGACGCGCGAC GGCGCTGGAGGTGCAGTGGGGCCTCTACGAGCGTGCTCGCAAATACGAGC GCAGCCACGGGCTGTCGGCCGTCGGTGAGGACGTCGGCGTCGAGGTGCTC GGCTGGTGGGAGACGATCCTCAGCGGCCTCGAGCGGGATCGCAGCACCGT TGCCCACGTCGTCGATTGGGTGGCCAAGGAGCGGCTGGTGCAGGGCTACC AGGAGCGCCACAACGTGCGCGACGGGGACGCCCGCCTGAAGGCGCTCGAC CTGCAGTACCACGACATGCGCCCGGACAAGTGCCTGGCCCGCCGCGTCGG CCTGGTGACGATGGCCGGTGACGACGAGGTGCGCGAGGCGATGACCCAGC CGCCGACCACGACACGGGCCTACTTCCGGGGCCGTTGCCTGGCCAAGTGG CCCAACGACATCGTCGCCGCGAACTGGGACAGCCTGGTCTTCGACGTCGG TCGCGACCCGCTGCGACGGGTGCCGATGATGGAACCGCTGCGCGGCACAG CAGAATCCGTGGCTAGGTTGATCGACGAGAGCAACACCCCAGCGGAGCTC CTTGCCCGGCTGGGTGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13651:1..1221+

>mRNA_P-wetherbeei_contig13651.1.1 ID=mRNA_P-wetherbeei_contig13651.1.1|Name=mRNA_P-wetherbeei_contig13651.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1221bp|location=Sequence derived from alignment at P-wetherbeei_contig13651:1..1221+ (Phaeothamnion wetherbeei SAG_119_79)
GCCCACCCGGAGGTCAGCACGCCGGAGTGCCTCGACGCGCGCGAGGTGGT
TCGCTTCGATCGCGCCGGTGAGGAGATCGTGCGCGCCAGCATGGTGGCCG
CGTCCTCGATGCTCGCCACCGGCGCCGAACTGATCTGCCACAAGAACAAC
TCCGACGGCAAGGGCAACAGCTACGGCTGCCACGAGAACTACCTGCTGGC
CCGCGAGGTGCCGTTCGGCCGGATCGTCGCCCAGGTCACCCCGCACTTCG
TCACCCGCCAGATCGTCATCGGCGCCGGCAAGGTCGGCTGCGAGCTGCCC
GGCGTGCAGGCGAGCGAGATCCCGTTCCAGATCAGCCAGCGCGCCGACTT
CTTCGAGGAGGAGGTCGGGCTGGAGACCACGTTGAAGCGCCCGATCATCA
ACACGCGCGACGAGCCGCACTGCGACGCGTCGAAGTACCGACGGCTGCAC
GTGATCGTCGGCGACGCGAACATGAGCGAGGTGGCCACCTACGTCAAGGT
CGGGGCCACCGCGCTGGTTCTGGCGATGATCGAGGACGACGCGCTCGGCG
ACGACTGGGTGCTGGCGAACCCCGTGGCGGCCATCCGACAGGTCAGCCAC
GACACCTCGCTGACGCGCACGATCCTGCTGCGCAGCGGTCGACGCGCGAC
GGCGCTGGAGGTGCAGTGGGGCCTCTACGAGCGTGCTCGCAAATACGAGC
GCAGCCACGGGCTGTCGGCCGTCGGTGAGGACGTCGGCGTCGAGGTGCTC
GGCTGGTGGGAGACGATCCTCAGCGGCCTCGAGCGGGATCGCAGCACCGT
TGCCCACGTCGTCGATTGGGTGGCCAAGGAGCGGCTGGTGCAGGGCTACC
AGGAGCGCCACAACGTGCGCGACGGGGACGCCCGCCTGAAGGCGCTCGAC
CTGCAGTACCACGACATGCGCCCGGACAAGTGCCTGGCCCGCCGCGTCGG
CCTGGTGACGATGGCCGGTGACGACGAGGTGCGCGAGGCGATGACCCAGC
CGCCGACCACGACACGGGCCTACTTCCGGGGCCGTTGCCTGGCCAAGTGG
CCCAACGACATCGTCGCCGCGAACTGGGACAGCCTGGTCTTCGACGTCGG
TCGCGACCCGCTGCGACGGGTGCCGATGATGGAACCGCTGCGCGGCACAG
CAGAATCCGTGGCTAGGTTGATCGACGAGAGCAACACCCCAGCGGAGCTC
CTTGCCCGGCTGGGTGCCTGA
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