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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 2547 |
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Cds size | 2223 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185993.9356446-UTR-P-wetherbeei_contig1365:3482..3806 | 1683185993.9356446-UTR-P-wetherbeei_contig1365:3482..3806 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1365 3483..3806 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683185993.94517-CDS-P-wetherbeei_contig1365:3806..6029 | 1683185993.94517-CDS-P-wetherbeei_contig1365:3806..6029 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1365 3807..6029 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1365.2.1 >prot_P-wetherbeei_contig1365.2.1 ID=prot_P-wetherbeei_contig1365.2.1|Name=mRNA_P-wetherbeei_contig1365.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=741bp
MPSSPWAPVLGGIGFLALLLFATAALVEGLWMIPAFFVFVRLGVLSKVTM
QELHRAAPEAKSLLLLGFACGTTIVLAACLGAIAGLRVLHQYVVTLSDTA
DALLDACWYAFSAIVMTFLAVALIRLVALRDSLRRRVIAAVAAMPTGDAR
ERRERLFYESIKFALRDGLRSSLFYVMLGWRDALAIPLPAGVGFLVGMFC
AGWLVRLAVAVPLQAFSSAGDAAAKDVTILGGGGGGAATAAVEGAAVAAG
GVISAEVEARTLSASWGVQRTRIFDSLTSEHQEAVDMAIRTASGHTLPRL
YDSNPSSCDWGNSYCDEDCESAYGGGYSSSDGGAGHGSQRRTGSGSRRAP
ISTTAAVEFGEGPATQAPKPPGGANAVTSVVPATADAAAAVEGRTHVRTS
SAGVPPLPQILEEQEDKDTLEDKETLASWYVIMAGGAQRSAARAAAAALV
VEAAAETAAPAVKAGDTAAAAAAAVAAVAAATEAKALATAAWEEGGDSGY
VADADGGSGGGGGGGLTTPYSARSGAGAGGGGAYTPSLAASFFQSSQGCR
TVGGGGRGASRATSQVAWEEQEDEDGGLSNGDGDGFGDEDDGRGGGGGGG
GEPLALTAAAVSALTLMLIAAGMAGAGAMRLQDAGAIASDTAVDTLWNAC
TADADGAGDGPLDAFVRVLQEQFYYECSPTLLYIYAWCGYWSIALFIVSF
CLRLCCWARVPGGGLNGRVRTAAAAGPIRRGSTLRLGGAAA back to topmRNA from alignment at P-wetherbeei_contig1365:3483..6029+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1365.2.1 ID=mRNA_P-wetherbeei_contig1365.2.1|Name=mRNA_P-wetherbeei_contig1365.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2547bp|location=Sequence derived from alignment at P-wetherbeei_contig1365:3483..6029+ (Phaeothamnion wetherbeei SAG_119_79)
TGTTGCTCTGGCAGTAACACACCCTCTCGTAGAAGCAATGCGCCCTTTGT
GAAAGAAACGGCTATTAAGAGAAAAGGAGGAACAGAAGGTGAGCGGGAAA
TCTTGATGCTCCACCCGCCACGCGCCATTCTTGCCCTTCATAGTTCTTAG
CGATGGCTTCTCCTTAAGCAGCACTGTCCTTCTTCTGTACAGGGAACAAC
CGTGAGGTCTTGCACAAACTTTGCTTCCACCTCTTCCTTCCTCGTTTGAA
GTCCTTCCACTGGCTCTCCCATTTCGTGCCTCCGCACAGTGAACAATCAG
CCGGCCTTCCTGACAAGCTCCCAGATGCCGTCGTCTCCCTGGGCGCCCGT
TCTGGGGGGGATCGGGTTTTTAGCTCTTTTGCTCTTTGCTACAGCAGCGC
TCGTGGAAGGGCTGTGGATGATACCGGCATTCTTTGTCTTTGTTCGGCTG
GGGGTTCTCTCCAAAGTGACGATGCAAGAATTGCATCGCGCCGCTCCTGA
GGCGAAGTCGCTGCTATTGCTCGGGTTCGCGTGCGGGACCACCATCGTTC
TCGCTGCTTGCCTGGGTGCGATAGCCGGCCTCCGCGTATTGCATCAGTAC
GTCGTGACGCTCTCCGATACCGCGGACGCGCTACTCGACGCGTGCTGGTA
CGCCTTCTCGGCCATCGTAATGACTTTCCTCGCAGTTGCGCTGATTCGAC
TGGTGGCCTTGAGGGACTCGCTCCGCCGCCGCGTCATAGCGGCCGTAGCC
GCTATGCCGACTGGGGACGCGCGCGAACGCCGCGAGCGCCTGTTCTACGA
GTCGATAAAGTTTGCGCTTCGCGACGGCCTCCGCAGTTCGCTCTTCTATG
TGATGCTTGGGTGGCGGGACGCGCTCGCCATCCCGCTGCCGGCCGGCGTG
GGGTTTCTCGTCGGCATGTTCTGCGCCGGCTGGCTGGTGCGCCTGGCCGT
CGCCGTTCCGCTCCAGGCATTTTCTTCCGCCGGCGATGCCGCCGCCAAAG
ATGTGACGATCCTCGGTGGCGGCGGCGGCGGCGCGGCGACGGCGGCGGTG
GAAGGGGCCGCAGTGGCGGCCGGCGGAGTCATCTCGGCCGAAGTCGAGGC
GCGGACGCTGTCGGCGTCCTGGGGCGTCCAGCGGACCCGCATTTTCGACT
CGTTGACGTCCGAGCATCAAGAGGCAGTGGACATGGCCATTCGCACCGCC
AGCGGCCACACGCTGCCGCGGCTCTACGACAGCAACCCCAGCAGCTGCGA
CTGGGGCAACAGCTACTGCGACGAAGACTGCGAGTCGGCCTACGGCGGTG
GCTACAGCTCCAGCGACGGCGGCGCAGGTCACGGCAGCCAGCGGCGCACC
GGCAGCGGCAGCCGGCGCGCCCCGATCTCGACGACGGCCGCCGTAGAGTT
TGGGGAAGGGCCAGCGACGCAGGCGCCAAAGCCTCCCGGCGGAGCCAACG
CCGTCACATCCGTCGTCCCTGCCACCGCAGATGCCGCCGCCGCCGTCGAA
GGACGAACCCACGTCAGAACCAGCAGCGCGGGCGTGCCGCCGCTCCCGCA
GATTTTGGAAGAACAGGAAGACAAGGATACGCTTGAAGATAAGGAAACGC
TGGCGTCATGGTACGTCATCATGGCTGGCGGGGCGCAGCGCTCTGCGGCG
AGAGCCGCAGCGGCGGCATTGGTGGTGGAAGCAGCAGCGGAAACGGCGGC
ACCGGCCGTCAAAGCCGGCGACACTGCCGCTGCTGCGGCGGCGGCTGTGG
CGGCGGTGGCGGCGGCGACGGAGGCAAAGGCGTTGGCGACGGCGGCTTGG
GAGGAAGGCGGCGATTCCGGCTACGTCGCTGACGCGGACGGCGGCAGCGG
CGGCGGCGGCGGCGGCGGCCTGACGACCCCGTATTCTGCCCGCAGCGGCG
CCGGCGCTGGCGGCGGCGGCGCCTATACGCCCAGCCTTGCCGCAAGCTTT
TTCCAGAGCAGTCAGGGCTGCCGCACCGTGGGCGGCGGCGGCCGCGGCGC
CTCACGTGCCACATCGCAAGTCGCGTGGGAAGAGCAGGAGGACGAAGACG
GTGGCCTTAGCAATGGAGACGGCGACGGTTTTGGCGATGAAGATGACGGC
AGGGGCGGCGGCGGCGGTGGCGGCGGCGAGCCGCTGGCACTCACGGCGGC
GGCAGTTTCGGCGCTCACGCTGATGCTGATCGCCGCCGGCATGGCGGGCG
CGGGCGCGATGCGGCTGCAGGATGCTGGCGCCATCGCCAGCGACACCGCC
GTCGATACCCTCTGGAACGCGTGCACAGCGGACGCCGACGGCGCCGGCGA
CGGTCCGCTCGACGCGTTTGTTCGCGTGCTTCAAGAACAGTTCTACTACG
AGTGCAGCCCGACGCTCCTCTACATTTATGCATGGTGCGGCTACTGGAGC
ATCGCCCTCTTCATCGTGTCGTTCTGCCTGCGGCTCTGCTGCTGGGCACG
CGTGCCCGGCGGCGGGCTCAACGGCCGCGTCCGCACCGCGGCTGCCGCGG
GGCCGATCCGGCGCGGCAGCACGCTGCGGCTTGGTGGCGCAGCCGCC back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1365:3483..6029+ >mRNA_P-wetherbeei_contig1365.2.1 ID=mRNA_P-wetherbeei_contig1365.2.1|Name=mRNA_P-wetherbeei_contig1365.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2223bp|location=Sequence derived from alignment at P-wetherbeei_contig1365:3483..6029+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGTCGTCTCCCTGGGCGCCCGTTCTGGGGGGGATCGGGTTTTTAGC
TCTTTTGCTCTTTGCTACAGCAGCGCTCGTGGAAGGGCTGTGGATGATAC
CGGCATTCTTTGTCTTTGTTCGGCTGGGGGTTCTCTCCAAAGTGACGATG
CAAGAATTGCATCGCGCCGCTCCTGAGGCGAAGTCGCTGCTATTGCTCGG
GTTCGCGTGCGGGACCACCATCGTTCTCGCTGCTTGCCTGGGTGCGATAG
CCGGCCTCCGCGTATTGCATCAGTACGTCGTGACGCTCTCCGATACCGCG
GACGCGCTACTCGACGCGTGCTGGTACGCCTTCTCGGCCATCGTAATGAC
TTTCCTCGCAGTTGCGCTGATTCGACTGGTGGCCTTGAGGGACTCGCTCC
GCCGCCGCGTCATAGCGGCCGTAGCCGCTATGCCGACTGGGGACGCGCGC
GAACGCCGCGAGCGCCTGTTCTACGAGTCGATAAAGTTTGCGCTTCGCGA
CGGCCTCCGCAGTTCGCTCTTCTATGTGATGCTTGGGTGGCGGGACGCGC
TCGCCATCCCGCTGCCGGCCGGCGTGGGGTTTCTCGTCGGCATGTTCTGC
GCCGGCTGGCTGGTGCGCCTGGCCGTCGCCGTTCCGCTCCAGGCATTTTC
TTCCGCCGGCGATGCCGCCGCCAAAGATGTGACGATCCTCGGTGGCGGCG
GCGGCGGCGCGGCGACGGCGGCGGTGGAAGGGGCCGCAGTGGCGGCCGGC
GGAGTCATCTCGGCCGAAGTCGAGGCGCGGACGCTGTCGGCGTCCTGGGG
CGTCCAGCGGACCCGCATTTTCGACTCGTTGACGTCCGAGCATCAAGAGG
CAGTGGACATGGCCATTCGCACCGCCAGCGGCCACACGCTGCCGCGGCTC
TACGACAGCAACCCCAGCAGCTGCGACTGGGGCAACAGCTACTGCGACGA
AGACTGCGAGTCGGCCTACGGCGGTGGCTACAGCTCCAGCGACGGCGGCG
CAGGTCACGGCAGCCAGCGGCGCACCGGCAGCGGCAGCCGGCGCGCCCCG
ATCTCGACGACGGCCGCCGTAGAGTTTGGGGAAGGGCCAGCGACGCAGGC
GCCAAAGCCTCCCGGCGGAGCCAACGCCGTCACATCCGTCGTCCCTGCCA
CCGCAGATGCCGCCGCCGCCGTCGAAGGACGAACCCACGTCAGAACCAGC
AGCGCGGGCGTGCCGCCGCTCCCGCAGATTTTGGAAGAACAGGAAGACAA
GGATACGCTTGAAGATAAGGAAACGCTGGCGTCATGGTACGTCATCATGG
CTGGCGGGGCGCAGCGCTCTGCGGCGAGAGCCGCAGCGGCGGCATTGGTG
GTGGAAGCAGCAGCGGAAACGGCGGCACCGGCCGTCAAAGCCGGCGACAC
TGCCGCTGCTGCGGCGGCGGCTGTGGCGGCGGTGGCGGCGGCGACGGAGG
CAAAGGCGTTGGCGACGGCGGCTTGGGAGGAAGGCGGCGATTCCGGCTAC
GTCGCTGACGCGGACGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCCTGAC
GACCCCGTATTCTGCCCGCAGCGGCGCCGGCGCTGGCGGCGGCGGCGCCT
ATACGCCCAGCCTTGCCGCAAGCTTTTTCCAGAGCAGTCAGGGCTGCCGC
ACCGTGGGCGGCGGCGGCCGCGGCGCCTCACGTGCCACATCGCAAGTCGC
GTGGGAAGAGCAGGAGGACGAAGACGGTGGCCTTAGCAATGGAGACGGCG
ACGGTTTTGGCGATGAAGATGACGGCAGGGGCGGCGGCGGCGGTGGCGGC
GGCGAGCCGCTGGCACTCACGGCGGCGGCAGTTTCGGCGCTCACGCTGAT
GCTGATCGCCGCCGGCATGGCGGGCGCGGGCGCGATGCGGCTGCAGGATG
CTGGCGCCATCGCCAGCGACACCGCCGTCGATACCCTCTGGAACGCGTGC
ACAGCGGACGCCGACGGCGCCGGCGACGGTCCGCTCGACGCGTTTGTTCG
CGTGCTTCAAGAACAGTTCTACTACGAGTGCAGCCCGACGCTCCTCTACA
TTTATGCATGGTGCGGCTACTGGAGCATCGCCCTCTTCATCGTGTCGTTC
TGCCTGCGGCTCTGCTGCTGGGCACGCGTGCCCGGCGGCGGGCTCAACGG
CCGCGTCCGCACCGCGGCTGCCGCGGGGCCGATCCGGCGCGGCAGCACGC
TGCGGCTTGGTGGCGCAGCCGCC back to top
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