mRNA_P-wetherbeei_contig1363.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1363.2.2
Unique NamemRNA_P-wetherbeei_contig1363.2.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A836CGA6_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA6_9STRA)

HSP 1 Score: 273 bits (697), Expect = 6.190e-88
Identity = 145/228 (63.60%), Postives = 170/228 (74.56%), Query Frame = 1
Query:   16 LGACQAFHAPLPKATSSRGTSVTMMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREG----IVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPYLF 687
            L    AF A  P   + R +S   M  KSK+IPF P P  LD S+PG  GFDPLGL++ID D+ +++VP  ASMR+G    +VD  YWMREAE+KHCR+AMLAV GW+AVDMGLRLPG+KY+ L++ISAHDAMVS GNMV   + H       +LLE+I GAAIF AA GSGR+PG F  DPLGLAKD AKSARY  SE+KNGRLAMLAF GIATQ+VLTGHSFPYLF
Sbjct:   11 LAGASAFQAASPLKGAVRSSSSMSMMAKSKSIPFAPQPAALDGSLPGDVGFDPLGLTSIDFDWAKWIVPARASMRKGDEPLVVDTLYWMREAELKHCRVAMLAVVGWLAVDMGLRLPGTKYMGLSAISAHDAMVSGGNMVV--MLHF-----ALLLELINGAAIFAAAQGSGRKPGDFCLDPLGLAKDSAKSARYQLSEVKNGRLAMLAFSGIATQAVLTGHSFPYLF 231          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: D7G3A4_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3A4_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 5.330e-72
Identity = 134/236 (56.78%), Postives = 161/236 (68.22%), Query Frame = 1
Query:    1 AALATL--GACQAFHAPLPKATSSRGTSVTMMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMRE-GI-----VDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLT-SISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPY 681
            A+LA L  GAC AF AP+P   ++R  +  +    SKAIPFMP P+ LD +MPG  GFDPLGLS ID DF EF+VP AA MRE G+     VD  YWMREAE+KH R+A LAV GW+ VD G+R PG +Y  ++ S+ AHD MV+SGNM    L        V LLE++GGAAIF AA+GSGRQPG F  DPL L  +PAK ARY  +EI++ RLAM A GGIATQ+VL G  FPY
Sbjct:    6 ASLAALVGGAC-AFTAPMPMHRAARSPAGALSMANSKAIPFMPQPENLDGTMPGDIGFDPLGLSKIDIDFSEFIVPGAAVMREEGVPSKSPVDTLYWMREAELKHGRVAQLAVVGWILVDQGVRFPGDQYAAISQSVGAHDPMVASGNMTLLLL-------VVFLLEMVGGAAIFGAASGSGRQPGDFGLDPLNLTSNPAKKARYELNEIQHCRLAMSAIGGIATQAVLNGGDFPY 233          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: W7UAI7_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAI7_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.980e-65
Identity = 119/201 (59.20%), Postives = 135/201 (67.16%), Query Frame = 1
Query:   82 TMMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVP-KAASMREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPY 681
            T +A KSKA+PF+ APK LD S+P   GFDPL LS ID DF   MVP K    R G+  A  W REAEIKH R AMLAV GWVAVDMGLRLP +KY    ++ AHD  V SG+M    L       A+  LE++ GA I++ + GS R  G F FDPLGL KDPAK ARY  SEIKNGRLAMLAFGGIATQ+VLT   FPY
Sbjct:   29 TQLAAKSKAVPFLEAPKALDGSLPADVGFDPLNLSDIDFDFTYLMVPTKWDESRTGL-SALKWFREAEIKHGRFAMLAVLGWVAVDMGLRLPVAKYAGYNAVQAHDVFVKSGDMTVGLL-------AIGFLEVVMGAGIYEMSKGSDRAAGDFSFDPLGLGKDPAKYARYQVSEIKNGRLAMLAFGGIATQAVLTNGGFPY 221          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A7S2RV11_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RV11_9STRA)

HSP 1 Score: 197 bits (500), Expect = 2.690e-58
Identity = 115/227 (50.66%), Postives = 143/227 (63.00%), Query Frame = 1
Query:    7 LATLGACQAFHAPLPKATSSRGTSVTMMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREGI-VDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLA-KDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPY 681
            LA LG+  AF    P A  +   + TM A KS A+PFMP P  LD SMPG  GFDPLG S+ID   L  ++P AASM     +   YWMREAE+KH R+ MLAV G+ AVDMG R PG+KY DLTS++AHDAMV+SGNM    L       AV L+E+I   A+ +AA GSGR PG F  DP+    K+  ++ R   +E+ + RLAMLAF G+ TQ+V  G  FPY
Sbjct:    8 LAFLGSAVAFA---PAARRAARLTTTMAAEKSAALPFMPKPSALDGSMPGDVGFDPLGFSSIDPVKLPQIIPPAASMATSEPLPTLYWMREAELKHGRICMLAVTGFAAVDMGFRFPGAKYADLTSVTAHDAMVASGNMGFLFL-------AVALIELISSVALVEAAQGSGRVPGDFALDPMKFTQKNEKETERLRLAEVTHARLAMLAFSGMVTQAVAVGDKFPY 224          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A6V1NRI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NRI4_HETAK)

HSP 1 Score: 176 bits (446), Expect = 8.150e-50
Identity = 108/221 (48.87%), Postives = 138/221 (62.44%), Query Frame = 1
Query:   43 PLPKATSSRGTSV--TMMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREGIVDAS--YWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLT-SISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAK-DPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHS-FPYL 684
            PL KA+  R  S   + + +KSK++PF+ AP  LD S  G  GFDPL LS I  DF + +VP+  S R      +  YWMREAE+KH R+AMLAV G VAVD+G RLPG+ +  +  ++ AHD MV+ G M    L     AGA    E++GGAA+++AA GSGR+PG F  DP  L K DP +   + T EIKNGRLAM+   GI TQ+ L G S FPYL
Sbjct:   21 PLIKASEPRRISSGPSALHLKSKSLPFLDAPGSLDGSFAGDIGFDPLRLSEIPFDFSQLVVPRQFSGRPSSATLATLYWMREAEVKHGRVAMLAVLGCVAVDLGARLPGAAFAGVRDALGAHDVMVARGPMALLLLA----AGAA---EVLGGAAVYEAAKGSGREPGDFQLDPFSLVKGDPVRKKDFQTKEIKNGRLAMIGISGILTQAGLEGQSVFPYL 234          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A6V1QB66_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QB66_HETAK)

HSP 1 Score: 171 bits (434), Expect = 1.040e-48
Identity = 113/229 (49.34%), Postives = 135/229 (58.95%), Query Frame = 1
Query:    1 AALATLGA-CQAFHAPLPKATSSRGTSVTMMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPYL 684
            AA A L A   AF AP+    +   T  TMMA KS A+PFMP P  LD+S+PGYAGFDP+G S    D+L              VD   W+REAEIKH R+ MLAV G++A DMGL LPG  + +  S+ AHD  + +G M  Q L  +  A      E  G  AI +   GSGR PG F FDPLG +K P K+  YAT EI NGRLAMLAF GI TQS L  +SFPY+
Sbjct:    5 AAFAALFAGADAFVAPMDGPKNVAKT--TMMAEKSAALPFMPKPANLDESLPGYAGFDPVGFS----DWLS-------------VD---WLREAEIKHGRICMLAVVGYIATDMGLHLPGDMH-NYDSLLAHDQAIKNGAM-QQLLMGIGWA------ETFGFLAIGETMRGSGRAPGDFGFDPLGFSKTPEKAQEYATKEINNGRLAMLAFSGIVTQSALYENSFPYM 203          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: W7T6P5_9STRA (Light-harvesting protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6P5_9STRA)

HSP 1 Score: 173 bits (438), Expect = 1.890e-48
Identity = 105/223 (47.09%), Postives = 134/223 (60.09%), Query Frame = 1
Query:   16 LGACQAFHAPLPKATSSRGTSVTMMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPYL 684
            +GA  AF  P+P  T +RG +V+MMA KSK+IPF+P P  LD + PG  GFDP+G ++         +P A            +++EAEIKHCR+AMLA  GW+  D  + LPG  +  ++S++AHD  V SG +  Q L    IA      E I   AI Q   GSGRQPG F FDPLG AKD     +   +E+KNGRLAMLAF GI TQ+ LTGHSFPY+
Sbjct:   79 IGAAAAFVPPMPVTTRARG-AVSMMAEKSKSIPFLPRPPALDGTAPGDVGFDPVGFTS--------WLPLA------------YLQEAEIKHCRIAMLATLGWIVADF-VHLPGDVHA-VSSLAAHDVAVKSGALA-QILIWTSIA------EAISVVAISQMLEGSGRQPGDFKFDPLGFAKDEQTLKKLQLNELKNGRLAMLAFSGIVTQAALTGHSFPYM 271          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A6U4L863_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L863_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.110e-48
Identity = 112/259 (43.24%), Postives = 143/259 (55.21%), Query Frame = 1
Query:    4 ALATLGACQAFHAPLPKATSSRGTSVTMMAVK--SKAIPFMPAPKGLDDSMPGYAGFDPLGLSAI-DGDFLEFMVPKAASMREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAK-DPAKSARYATSEIKNGR-----------------------------LAMLAFGGIATQSVLTGHSFPY 681
            ALA  GA  AF AP      +  T V M A +  SK++PF+   K LD +M G A FDP+G S I D D+   +VP   +     +   YWMREAE+KH R+ MLA  GWVA D+G R PG  Y  +++++AHDAMV +GNM         +   + ++EI+ GAAI++AA GSGR PG + FDPLGL + + AK A YA  EIKN R                             LAML F GI TQ+ LTGHSFPY
Sbjct:   28 ALAIAGAA-AFQAP----RKAGRTPVRMQAREGMSKSVPFLKTNKNLDGTMVGDADFDPMGWSNIEDFDWSGIVVPAWFNKEREGISTLYWMREAELKHGRICMLATLGWVATDLGFRFPGEAYSGISTLAAHDAMVKNGNMGF-------LLTVIFVIEILSGAAIYEAAKGSGRAPGDYGFDPLGLGRGNDAKKADYALKEIKNARCVPSTILDPNACKSSSHPPTSPSPPSFSSLAMLGFSGIVTQAALTGHSFPY 274          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A4D9CSZ5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSZ5_9STRA)

HSP 1 Score: 166 bits (421), Expect = 8.540e-47
Identity = 102/223 (45.74%), Postives = 134/223 (60.09%), Query Frame = 1
Query:   16 LGACQAFHAPLPKATSSRGTSVTMMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPYL 684
            +GA  AF   +P  T +RG +V+MMA KSK+IPF+P P  LD +  G  GFDP+G ++         +P A            +++EAEIKHCR+AMLA  GW+  D  + LPG  +  ++S++AHD  V SG +  Q L    IA A+ ++      AI Q   GSGRQPG F FDPLG AKD     +   +E+KNGRLAMLAF GI TQ+ LTGHSFPY+
Sbjct:   10 IGAAAAFVPLMPATTRTRG-AVSMMAEKSKSIPFLPRPPALDGTAAGDVGFDPVGFTS--------WLPLA------------YLQEAEIKHCRIAMLATLGWIVADF-VHLPGDVHA-VSSLAAHDVAVKSGALA-QILIWTSIAEAISVI------AISQMLEGSGRQPGDFKFDPLGFAKDEQTLKKLQLNELKNGRLAMLAFSGIVTQAALTGHSFPYM 202          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A8J5XPQ1_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPQ1_DIALT)

HSP 1 Score: 166 bits (420), Expect = 1.130e-46
Identity = 99/224 (44.20%), Postives = 125/224 (55.80%), Query Frame = 1
Query:   22 ACQAFHAPL----PKATSSRGTSVTMMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPY 681
            AC  + A L    P         V MMA KSK++PF+ AP  L     G  GFDPLG S      L                   WMREAE+KH R+ MLAVAGW+ VD+G+  PG++Y  L +++AH+AMV SGNM    +       AV +LE+ GG A+++ ANGSGR  G + FDPLG A+D A        EIKNGRLAM+AF GI TQ+ L+G   PY
Sbjct:    2 ACVLYSAALAFAGPSGARPYRAGVEMMA-KSKSLPFLEAPPQLASQYAGDVGFDPLGFSKSGPQTLT------------------WMREAELKHSRVCMLAVAGWLVVDLGIHFPGAQYEGLRALTAHNAMVESGNMWLLLI-------AVSILELAGGLALYEQANGSGRAAGDYKFDPLGYAQDEATLQELQLKEIKNGRLAMIAFSGIVTQAALSGRGLPY 199          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CGA6_9STRA6.190e-8863.60Light harvesting complex protein n=1 Tax=Tribonema... [more]
D7G3A4_ECTSI5.330e-7256.78Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
W7UAI7_9STRA2.980e-6559.20Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
A0A7S2RV11_9STRA2.690e-5850.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V1NRI4_HETAK8.150e-5048.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V1QB66_HETAK1.040e-4849.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7T6P5_9STRA1.890e-4847.09Light-harvesting protein n=2 Tax=Nannochloropsis g... [more]
A0A6U4L863_9STRA2.110e-4843.24Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A4D9CSZ5_9STRA8.540e-4745.74Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8J5XPQ1_DIALT1.130e-4644.20Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1363contigP-wetherbeei_contig1363:4419..6403 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G3A4
Preferred nameLhcr11
PFAMsChloroa_b-bind
Model size1030
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue4.41e-70
EggNOG OGs2DDP1@1|root,2S5ND@2759|Eukaryota
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-07_005670.1
DescriptionChlorophyll A-B binding protein
Cds size606
COG categoryU
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1363.2.2prot_P-wetherbeei_contig1363.2.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1363 4759..6319 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185993.450911-UTR-P-wetherbeei_contig1363:4418..47581683185993.450911-UTR-P-wetherbeei_contig1363:4418..4758Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1363 4419..4758 -
1683185993.5078564-UTR-P-wetherbeei_contig1363:6319..64031683185993.5078564-UTR-P-wetherbeei_contig1363:6319..6403Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1363 6320..6403 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185993.4596548-CDS-P-wetherbeei_contig1363:4758..48341683185993.4596548-CDS-P-wetherbeei_contig1363:4758..4834Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1363 4759..4834 -
1683185993.4692643-CDS-P-wetherbeei_contig1363:5038..52291683185993.4692643-CDS-P-wetherbeei_contig1363:5038..5229Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1363 5039..5229 -
1683185993.4790976-CDS-P-wetherbeei_contig1363:5425..56381683185993.4790976-CDS-P-wetherbeei_contig1363:5425..5638Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1363 5426..5638 -
1683185993.4885435-CDS-P-wetherbeei_contig1363:6074..61291683185993.4885435-CDS-P-wetherbeei_contig1363:6074..6129Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1363 6075..6129 -
1683185993.4979796-CDS-P-wetherbeei_contig1363:6248..63191683185993.4979796-CDS-P-wetherbeei_contig1363:6248..6319Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1363 6249..6319 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1363.2.2

>prot_P-wetherbeei_contig1363.2.2 ID=prot_P-wetherbeei_contig1363.2.2|Name=mRNA_P-wetherbeei_contig1363.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=202bp
MMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAAS
MREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSI
SAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGV
FYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPYL
F*
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mRNA from alignment at P-wetherbeei_contig1363:4419..6403-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1363.2.2 ID=mRNA_P-wetherbeei_contig1363.2.2|Name=mRNA_P-wetherbeei_contig1363.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1985bp|location=Sequence derived from alignment at P-wetherbeei_contig1363:4419..6403- (Phaeothamnion wetherbeei SAG_119_79)
GCGGCGCTGGCGACGCTGGGCGCGTGCCAGGCTTTCCATGCGCCCCTGCC CAAGGCGACTTCGAGCCGAGGAACTTCTGTCACCATGATGGCGGTGAAGT CGAAGGCGATCCCGTTCATGCCCGCACCGAAGGGCCTCGATGACTCGATG CCCGGGTAAGAAAGAAACTTCACATTTCTGTCAAGGTCGTTCTCTCTTTG TTCCTGCTGAAATTCTTGTCTTTCAAGGCGTACGTTGACACGTTCTTCAC GTCGCCCCTTTCTACGCCCCTTAGATACGCTGGCTTCGACCCCTTGGGGC TGTCAGCCATCGACGGCGACTTCCTTGAGGTGCGTAGAAAAAAGGACGAC AGTTTGTTCTGGAGAGGCTGGAGGGCTAAATTGAAATGAATACAGCGTTC GCGCGTTTGCTTAACCACCTTGCCGCATGGTTTAATGCCGGAATGCCGGA TATGCCGCTGTTTCGCTGCATTCGCGGAGATTGGGCGACGGCTGAGCAAA CTAGACCTATGCAGATGTTTGGTGCGATAAATACTTTTAGTGTTTGTTTC GTGCGCCTCTTTAGGAAGGTGTCTTTGTTCTAGGAGATGATCGGTTCTAT TCAAGTGCTCCTTTTTACTGTGAAGGCTGAAGTCCGTTGTTCTGTTGCAG CAGTGTCACCTTTTTTTCCCGTATTGTCATTATCGTGCACTGAGAAACCA ATTAATCAAACCTTCTGCCCCACCCGCTCCTTCGGCATCGGCGTTGGCGA CGTTCTTACGCGCAGTTTATGGTGCCCAAGGCGGCGTCGATGCGGGAAGG AATCGTGGATGCGTCGTACTGGATGCGGGAGGCGGAGATCAAGCACTGCC GGCTGGCGATGTTGGCCGTAGCGGGGTGGGTGGCGGTTGACATGGGGCTG CGGCTGCCGGGGTCGAAGTACGTCGACCTCACGTCCATCTCGGCGCACGA CGCCATGGTGTCCAGCGGCAATATGGTCGTGATGATGCACTTCGGCAAGT GATCTCTGTCCGGTTTGTTTCTCGCGTTGTCTGTGCTGTTTTGCCAGTTT GAGTTCTTTTCGAGTTTGTTAGCATTTGGCTCTTTTCGAGTTCGTTGGCA TTTGGCATTCTGCGTTAGCTGAATACCCGATTTGCCCGACCCGTGAGGTG CGGCGCTCTTAATCTGACTCTAAGCCGCAATCGCTTCCGCATGTTCCTAT CGCCGGTGCAGTGATGCTGCTCGAGATCATCGGTGGCGCAGCGATCTTCC AGGCCGCCAACGGCTCGGGACGGCAGCCAGGCGTCTTCTACTTTGACCCC CTCGGCCTCGCCAAAGACCCAGCAAAGAGCGCCCGCTACGCCACGTCGGA GATCAAGAACGGCCGGTGAGTGGGGGAAGCGGGGAGAAAACTTGTTAGGT TTCAGGGTCCTAGGGCCTGTTTTGTCCTCTACCTGGTATGCCTGCTGATC GACTCATCGGGTTGATTTGCAAGTTTTGTACTCGGCCTCCGGCGGAGCCT ACCCTTTTGCGATCAATATCACGAAACTTCACCGCAATGCCCTCCAACTG CTGTTCTTGCTCGTCACAGGCTGGCGATGCTGGCGTTCGGCGGCATCGCG ACGCAGTCGGTGCTAACGGGGCACAGCTTCCCCTACCTCTTTTGAAACGA TATATCAATCCATCAATTCTGGCGATTGTTGGTCCGGCCGGGCCCGGGCG GCGGCCGCTGACGGACGACATCCGGACCCTCAATGCGCGCGCCACCGTGG TGGCGGCCGCGCACGGCGGCGGCGGGCGATGGACGGCCTGTATTAATGCT TGGCGGGCTTTAATCCCCGGCGCCGCAACGAGGCAAAGGGGAAAGGCCGG CGGGCGGGAGGGGGATTCGCTTGGGATTAGAGCCCCCAGGCGGATACAAT AGTGGCGAATTAGACGTGACGTGCGGCGTTGAAGTGATGTAAGATATGTG CCTCGCCGCGCTCTTTGAGTAGGAGGCAAATTCTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1363:4419..6403-

>mRNA_P-wetherbeei_contig1363.2.2 ID=mRNA_P-wetherbeei_contig1363.2.2|Name=mRNA_P-wetherbeei_contig1363.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig1363:4419..6403- (Phaeothamnion wetherbeei SAG_119_79)
ATGATGGCGGTGAAGTCGAAGGCGATCCCGTTCATGCCCGCACCGAAGGG
CCTCGATGACTCGATGCCCGGATACGCTGGCTTCGACCCCTTGGGGCTGT
CAGCCATCGACGGCGACTTCCTTGAGTTTATGGTGCCCAAGGCGGCGTCG
ATGCGGGAAGGAATCGTGGATGCGTCGTACTGGATGCGGGAGGCGGAGAT
CAAGCACTGCCGGCTGGCGATGTTGGCCGTAGCGGGGTGGGTGGCGGTTG
ACATGGGGCTGCGGCTGCCGGGGTCGAAGTACGTCGACCTCACGTCCATC
TCGGCGCACGACGCCATGGTGTCCAGCGGCAATATGGTCCCGCAATCGCT
TCCGCATGTTCCTATCGCCGGTGCAGTGATGCTGCTCGAGATCATCGGTG
GCGCAGCGATCTTCCAGGCCGCCAACGGCTCGGGACGGCAGCCAGGCGTC
TTCTACTTTGACCCCCTCGGCCTCGCCAAAGACCCAGCAAAGAGCGCCCG
CTACGCCACGTCGGAGATCAAGAACGGCCGGCTGGCGATGCTGGCGTTCG
GCGGCATCGCGACGCAGTCGGTGCTAACGGGGCACAGCTTCCCCTACCTC
TTTTGA
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