prot_P-wetherbeei_contig1363.2.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1363.2.2
Unique Nameprot_P-wetherbeei_contig1363.2.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length202
Homology
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A836CGA6_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA6_9STRA)

HSP 1 Score: 266 bits (679), Expect = 1.950e-87
Identity = 138/204 (67.65%), Postives = 161/204 (78.92%), Query Frame = 0
Query:    2 MAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREG----IVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPYLF 201
            M  KSK+IPF P P  LD S+PG  GFDPLGL++ID D+ +++VP  ASMR+G    +VD  YWMREAE+KHCR+AMLAV GW+AVDMGLRLPG+KY+ L++ISAHDAMVS GNMV   + H       +LLE+I GAAIF AA GSGR+PG F  DPLGLAKD AKSARY  SE+KNGRLAMLAF GIATQ+VLTGHSFPYLF
Sbjct:   35 MMAKSKSIPFAPQPAALDGSLPGDVGFDPLGLTSIDFDWAKWIVPARASMRKGDEPLVVDTLYWMREAELKHCRVAMLAVVGWLAVDMGLRLPGTKYMGLSAISAHDAMVSGGNMVV--MLHF-----ALLLELINGAAIFAAAQGSGRKPGDFCLDPLGLAKDSAKSARYQLSEVKNGRLAMLAFSGIATQAVLTGHSFPYLF 231          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: D7G3A4_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3A4_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 2.690e-69
Identity = 121/201 (60.20%), Postives = 142/201 (70.65%), Query Frame = 0
Query:    6 SKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMRE-GI-----VDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLT-SISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPY 199
            SKAIPFMP P+ LD +MPG  GFDPLGLS ID DF EF+VP AA MRE G+     VD  YWMREAE+KH R+A LAV GW+ VD G+R PG +Y  ++ S+ AHD MV+SGNM    L        V LLE++GGAAIF AA+GSGRQPG F  DPL L  +PAK ARY  +EI++ RLAM A GGIATQ+VL G  FPY
Sbjct:   40 SKAIPFMPQPENLDGTMPGDIGFDPLGLSKIDIDFSEFIVPGAAVMREEGVPSKSPVDTLYWMREAELKHGRVAQLAVVGWILVDQGVRFPGDQYAAISQSVGAHDPMVASGNMTLLLL-------VVFLLEMVGGAAIFGAASGSGRQPGDFGLDPLNLTSNPAKKARYELNEIQHCRLAMSAIGGIATQAVLNGGDFPY 233          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: W7UAI7_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAI7_9STRA)

HSP 1 Score: 213 bits (542), Expect = 9.540e-67
Identity = 118/199 (59.30%), Postives = 134/199 (67.34%), Query Frame = 0
Query:    2 MAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVP-KAASMREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPY 199
            +A KSKA+PF+ APK LD S+P   GFDPL LS ID DF   MVP K    R G+  A  W REAEIKH R AMLAV GWVAVDMGLRLP +KY    ++ AHD  V SG+M    L       A+  LE++ GA I++ + GS R  G F FDPLGL KDPAK ARY  SEIKNGRLAMLAFGGIATQ+VLT   FPY
Sbjct:   31 LAAKSKAVPFLEAPKALDGSLPADVGFDPLNLSDIDFDFTYLMVPTKWDESRTGL-SALKWFREAEIKHGRFAMLAVLGWVAVDMGLRLPVAKYAGYNAVQAHDVFVKSGDMTVGLL-------AIGFLEVVMGAGIYEMSKGSDRAAGDFSFDPLGLGKDPAKYARYQVSEIKNGRLAMLAFGGIATQAVLTNGGFPY 221          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A7S2RV11_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RV11_9STRA)

HSP 1 Score: 191 bits (484), Expect = 6.410e-58
Identity = 106/201 (52.74%), Postives = 131/201 (65.17%), Query Frame = 0
Query:    1 MMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREGI-VDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLA-KDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPY 199
            M A KS A+PFMP P  LD SMPG  GFDPLG S+ID   L  ++P AASM     +   YWMREAE+KH R+ MLAV G+ AVDMG R PG+KY DLTS++AHDAMV+SGNM    L       AV L+E+I   A+ +AA GSGR PG F  DP+    K+  ++ R   +E+ + RLAMLAF G+ TQ+V  G  FPY
Sbjct:   31 MAAEKSAALPFMPKPSALDGSMPGDVGFDPLGFSSIDPVKLPQIIPPAASMATSEPLPTLYWMREAELKHGRICMLAVTGFAAVDMGFRFPGAKYADLTSVTAHDAMVASGNMGFLFL-------AVALIELISSVALVEAAQGSGRVPGDFALDPMKFTQKNEKETERLRLAEVTHARLAMLAFSGMVTQAVAVGDKFPY 224          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A6V1NRI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NRI4_HETAK)

HSP 1 Score: 174 bits (440), Expect = 7.160e-51
Identity = 102/202 (50.50%), Postives = 129/202 (63.86%), Query Frame = 0
Query:    4 VKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREGIVDAS--YWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLT-SISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAK-DPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHS-FPYL 200
            +KSK++PF+ AP  LD S  G  GFDPL LS I  DF + +VP+  S R      +  YWMREAE+KH R+AMLAV G VAVD+G RLPG+ +  +  ++ AHD MV+ G M    L     AGA    E++GGAA+++AA GSGR+PG F  DP  L K DP +   + T EIKNGRLAM+   GI TQ+ L G S FPYL
Sbjct:   40 LKSKSLPFLDAPGSLDGSFAGDIGFDPLRLSEIPFDFSQLVVPRQFSGRPSSATLATLYWMREAEVKHGRVAMLAVLGCVAVDLGARLPGAAFAGVRDALGAHDVMVARGPMALLLLA----AGAA---EVLGGAAVYEAAKGSGREPGDFQLDPFSLVKGDPVRKKDFQTKEIKNGRLAMIGISGILTQAGLEGQSVFPYL 234          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A6V1QB66_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QB66_HETAK)

HSP 1 Score: 169 bits (428), Expect = 9.660e-50
Identity = 102/200 (51.00%), Postives = 122/200 (61.00%), Query Frame = 0
Query:    1 MMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPYL 200
            MMA KS A+PFMP P  LD+S+PGYAGFDP+G S    D+L              VD   W+REAEIKH R+ MLAV G++A DMGL LPG  + +  S+ AHD  + +G M  Q L  +  A      E  G  AI +   GSGR PG F FDPLG +K P K+  YAT EI NGRLAMLAF GI TQS L  +SFPY+
Sbjct:   32 MMAEKSAALPFMPKPANLDESLPGYAGFDPVGFS----DWLS-------------VD---WLREAEIKHGRICMLAVVGYIATDMGLHLPGDMH-NYDSLLAHDQAIKNGAM-QQLLMGIGWA------ETFGFLAIGETMRGSGRAPGDFGFDPLGFSKTPEKAQEYATKEINNGRLAMLAFSGIVTQSALYENSFPYM 203          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A6U4L863_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L863_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.910e-49
Identity = 99/225 (44.00%), Postives = 128/225 (56.89%), Query Frame = 0
Query:    6 SKAIPFMPAPKGLDDSMPGYAGFDPLGLSAI-DGDFLEFMVPKAASMREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAK-DPAKSARYATSEIKNGR-----------------------------LAMLAFGGIATQSVLTGHSFPY 199
            SK++PF+   K LD +M G A FDP+G S I D D+   +VP   +     +   YWMREAE+KH R+ MLA  GWVA D+G R PG  Y  +++++AHDAMV +GNM         +   + ++EI+ GAAI++AA GSGR PG + FDPLGL + + AK A YA  EIKN R                             LAML F GI TQ+ LTGHSFPY
Sbjct:   57 SKSVPFLKTNKNLDGTMVGDADFDPMGWSNIEDFDWSGIVVPAWFNKEREGISTLYWMREAELKHGRICMLATLGWVATDLGFRFPGEAYSGISTLAAHDAMVKNGNMGF-------LLTVIFVIEILSGAAIYEAAKGSGRAPGDYGFDPLGLGRGNDAKKADYALKEIKNARCVPSTILDPNACKSSSHPPTSPSPPSFSSLAMLGFSGIVTQAALTGHSFPY 274          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A8J5XPQ1_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPQ1_DIALT)

HSP 1 Score: 165 bits (418), Expect = 2.780e-48
Identity = 91/198 (45.96%), Postives = 116/198 (58.59%), Query Frame = 0
Query:    2 MAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPY 199
            M  KSK++PF+ AP  L     G  GFDPLG S      L                   WMREAE+KH R+ MLAVAGW+ VD+G+  PG++Y  L +++AH+AMV SGNM    +       AV +LE+ GG A+++ ANGSGR  G + FDPLG A+D A        EIKNGRLAM+AF GI TQ+ L+G   PY
Sbjct:   27 MMAKSKSLPFLEAPPQLASQYAGDVGFDPLGFSKSGPQTLT------------------WMREAELKHSRVCMLAVAGWLVVDLGIHFPGAQYEGLRALTAHNAMVESGNMWLLLI-------AVSILELAGGLALYEQANGSGRAAGDYKFDPLGYAQDEATLQELQLKEIKNGRLAMIAFSGIVTQAALSGRGLPY 199          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: A0A8J5XJN3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJN3_DIALT)

HSP 1 Score: 164 bits (415), Expect = 1.240e-47
Identity = 94/195 (48.21%), Postives = 117/195 (60.00%), Query Frame = 0
Query:    6 SKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPYL 200
            S A+PF+  P  LD SM G  GFDP GLS IDG+++                   WMREAEIKH R+AMLA AGW+AVD G +LPG KY  LTS++AH  MV SG+MV   L       AV  +E   GA IFQ     G  PG + +DPL + K+ +++A     E+KNGRLAM+AF GI TQ+ LTG  FPY+
Sbjct:   51 SAAVPFLSRPAKLDGSMVGDCGFDPAGLSEIDGEYINLK----------------WMREAEIKHGRVAMLATAGWLAVDFGFKLPGDKYAGLTSLNAHGPMVESGDMVLMLL-------AVAFVEATFGAKIFQP----GHTPGAYGWDPLDMGKEDSEAA---LKELKNGRLAMIAFSGIVTQAALTGSGFPYV 215          
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Match: F0YCE3_AURAN (Uncharacterized protein LHC26 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCE3_AURAN)

HSP 1 Score: 161 bits (407), Expect = 2.170e-46
Identity = 87/195 (44.62%), Postives = 122/195 (62.56%), Query Frame = 0
Query:    5 KSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAASMREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSISAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGVFYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPY 199
            KSK++PF+  P  LD ++PG  GFDPL  + +D +  E ++P  +      +   YWMREAE+KH RL MLA+ G++ VD G+  PG++Y  L+S+ AHDAMV+SGNM    L       AV +LE++    + QAA GSGR+ G F +DPL   +  AK+  +  +EI++ RLAMLAF G+ TQS L    FPY
Sbjct:   31 KSKSMPFLECPAALDGTLPGDVGFDPLRFTDLDWNMAEVIIPAKSISATESLPMVYWMREAELKHGRLCMLAIVGYLTVDAGIHFPGARYEGLSSLQAHDAMVASGNMGFMLL-------AVGVLELLSMVGVVQAAKGSGRKAGDFSWDPLYFTQG-AKADFFFEAEIQHARLAMLAFSGLVTQSALLEKGFPY 217          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1363.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CGA6_9STRA1.950e-8767.65Light harvesting complex protein n=1 Tax=Tribonema... [more]
D7G3A4_ECTSI2.690e-6960.20Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
W7UAI7_9STRA9.540e-6759.30Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
A0A7S2RV11_9STRA6.410e-5852.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V1NRI4_HETAK7.160e-5150.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V1QB66_HETAK9.660e-5051.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U4L863_9STRA1.910e-4944.00Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A8J5XPQ1_DIALT2.780e-4845.96Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A8J5XJN3_DIALT1.240e-4748.21Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
F0YCE3_AURAN2.170e-4644.62Uncharacterized protein LHC26 n=1 Tax=Aureococcus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 15..190
e-value: 6.2E-36
score: 124.4
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 3..199
e-value: 3.4E-45
score: 156.4
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 7..196
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 3..197
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 7..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1363contigP-wetherbeei_contig1363:4759..6319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1363.2.2mRNA_P-wetherbeei_contig1363.2.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1363 4419..6403 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1363.2.2 ID=prot_P-wetherbeei_contig1363.2.2|Name=mRNA_P-wetherbeei_contig1363.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=202bp
MMAVKSKAIPFMPAPKGLDDSMPGYAGFDPLGLSAIDGDFLEFMVPKAAS
MREGIVDASYWMREAEIKHCRLAMLAVAGWVAVDMGLRLPGSKYVDLTSI
SAHDAMVSSGNMVPQSLPHVPIAGAVMLLEIIGGAAIFQAANGSGRQPGV
FYFDPLGLAKDPAKSARYATSEIKNGRLAMLAFGGIATQSVLTGHSFPYL
F*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln