mRNA_P-wetherbeei_contig13620.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13620.1.1 vs. uniprot
Match: A0A835Z783_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z783_9STRA) HSP 1 Score: 112 bits (280), Expect = 4.910e-30 Identity = 51/70 (72.86%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 1 QRACAVCDGSGLVLQSRTGAPLSRPRKCYACGGFLPWVSWKAFFRSNLDVGNGGILRRPAADYAALNKEA 210
QRACAVC+GSGLV SRTG L +PRKCYACGGFLPW SW F+ +N VGNGGILRRPAADY LN +A
Sbjct: 72 QRACAVCNGSGLVTVSRTGRKLMQPRKCYACGGFLPWESWSRFWVANKYVGNGGILRRPAADYDELNAKA 141
BLAST of mRNA_P-wetherbeei_contig13620.1.1 vs. uniprot
Match: I2CSA8_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSA8_NANGC) HSP 1 Score: 109 bits (272), Expect = 5.760e-29 Identity = 45/70 (64.29%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 1 QRACAVCDGSGLVLQSRTGAPLSRPRKCYACGGFLPWVSWKAFFRSNLDVGNGGILRRPAADYAALNKEA 210
Q+ C VC GSGLV ++ +G LS PRKCYACGGFLPW W+ F+ SNLD+GNGG+L+RPAADY AL++ A
Sbjct: 69 QQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAA 138
BLAST of mRNA_P-wetherbeei_contig13620.1.1 vs. uniprot
Match: D7G800_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G800_ECTSI) HSP 1 Score: 109 bits (272), Expect = 7.590e-29 Identity = 46/70 (65.71%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 1 QRACAVCDGSGLVLQSRTGAPLSRPRKCYACGGFLPWVSWKAFFRSNLDVGNGGILRRPAADYAALNKEA 210
QRAC VC GSGLV SR+G L +P+KCYACGGFLPW SW F+++N+DVGNGG+L+RPA DY LN+ A
Sbjct: 77 QRACEVCKGSGLVSTSRSGKQLRQPKKCYACGGFLPWESWGKFWKTNMDVGNGGVLQRPARDYDELNEAA 146
BLAST of mRNA_P-wetherbeei_contig13620.1.1 vs. uniprot
Match: A0A6H5JMD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD9_9PHAE) HSP 1 Score: 109 bits (272), Expect = 2.780e-28 Identity = 46/70 (65.71%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 1 QRACAVCDGSGLVLQSRTGAPLSRPRKCYACGGFLPWVSWKAFFRSNLDVGNGGILRRPAADYAALNKEA 210
QRAC VC GSGLV SR+G L +P+KCYACGGFLPW SW F+++N+DVGNGG+L+RPA DY LN+ A
Sbjct: 127 QRACEVCKGSGLVSTSRSGKQLRQPKKCYACGGFLPWESWGKFWKTNMDVGNGGVLQRPARDYDELNEAA 196
BLAST of mRNA_P-wetherbeei_contig13620.1.1 vs. uniprot
Match: W7TBR1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBR1_9STRA) HSP 1 Score: 109 bits (272), Expect = 5.900e-28 Identity = 45/70 (64.29%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 1 QRACAVCDGSGLVLQSRTGAPLSRPRKCYACGGFLPWVSWKAFFRSNLDVGNGGILRRPAADYAALNKEA 210
Q+ C VC GSGLV ++ +G LS PRKCYACGGFLPW W+ F+ SNLD+GNGG+L+RPAADY AL++ A
Sbjct: 167 QQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAA 236
BLAST of mRNA_P-wetherbeei_contig13620.1.1 vs. uniprot
Match: A0A7S2V7K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7K2_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.400e-26 Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 1 QRACAVCDGSGLVLQSRTGAPLSRPRKCYACGGFLPWVSWKAFFRSNLDVGNGGILRRPAADYAALNKEA 210
Q C VC G+GLV+++ TG PLS PRKCYACGGF+P+VSW+ FF +N +GNGGILRRPA +Y L+ A
Sbjct: 117 QGRCGVCQGTGLVMETSTGIPLSNPRKCYACGGFVPFVSWRQFFFANTQIGNGGILRRPAKNYEELSAAA 186
BLAST of mRNA_P-wetherbeei_contig13620.1.1 vs. uniprot
Match: A0A4D9CUP8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUP8_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 7.070e-20 Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 QRACAVCDGSGLVLQSRTGAPLSRPRKCYACGGFLPWVSWKAFFRSNLDVGNGGI------LRRPAA 183
Q+ C VC GSGLV ++ +G LS PRKCYACGGFLPW W+ F+ SNLD+GNGG + RP+A
Sbjct: 167 QQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGCCSGRRRIMRPSA 233
BLAST of mRNA_P-wetherbeei_contig13620.1.1 vs. uniprot
Match: A0A1Y1IE18_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IE18_KLENI) HSP 1 Score: 60.1 bits (144), Expect = 2.200e-10 Identity = 28/47 (59.57%), Postives = 30/47 (63.83%), Query Frame = 1
Query: 1 QRACAVCDGSGLVLQSRTGAPLSRPRKCYACGGFLPWVSWKAFFRSN 141
QR C VC GSGLVL+ R R+C ACGGFLPW SWK FF N
Sbjct: 36 QRRCEVCKGSGLVLRGRYY------RRCNACGGFLPWQSWKRFFDIN 76
BLAST of mRNA_P-wetherbeei_contig13620.1.1 vs. uniprot
Match: A0A388LDF1_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LDF1_CHABU) HSP 1 Score: 60.8 bits (146), Expect = 3.140e-9 Identity = 28/44 (63.64%), Postives = 30/44 (68.18%), Query Frame = 1
Query: 1 QRACAVCDGSGLVLQSRTGAPLSRPRKCYACGGFLPWVSWKAFF 132
QR C VC GSGLVL+ R RKC ACGGFLPW+SWK FF
Sbjct: 274 QRRCHVCGGSGLVLKGRYY------RKCGACGGFLPWLSWKRFF 311
BLAST of mRNA_P-wetherbeei_contig13620.1.1 vs. uniprot
Match: A9NXE8_PICSI (Uncharacterized protein n=2 Tax=Picea sitchensis TaxID=3332 RepID=A9NXE8_PICSI) HSP 1 Score: 55.1 bits (131), Expect = 6.650e-8 Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 1
Query: 1 QRACAVCDGSGLVLQSRTGAPLSRPRKCYACGGFLPWVSWKAFF 132
Q+ C+VC GSGLV + + +CY+CGGFLPW SWK FF
Sbjct: 91 QKKCSVCKGSGLVQREKYFF------RCYSCGGFLPWQSWKRFF 128 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13620.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13620.1.1 >prot_P-wetherbeei_contig13620.1.1 ID=prot_P-wetherbeei_contig13620.1.1|Name=mRNA_P-wetherbeei_contig13620.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=70bp QRACAVCDGSGLVLQSRTGAPLSRPRKCYACGGFLPWVSWKAFFRSNLDVback to top mRNA from alignment at P-wetherbeei_contig13620:2..211+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13620.1.1 ID=mRNA_P-wetherbeei_contig13620.1.1|Name=mRNA_P-wetherbeei_contig13620.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=210bp|location=Sequence derived from alignment at P-wetherbeei_contig13620:2..211+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13620:2..211+ >mRNA_P-wetherbeei_contig13620.1.1 ID=mRNA_P-wetherbeei_contig13620.1.1|Name=mRNA_P-wetherbeei_contig13620.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=210bp|location=Sequence derived from alignment at P-wetherbeei_contig13620:2..211+ (Phaeothamnion wetherbeei SAG_119_79)back to top |