mRNA_P-wetherbeei_contig13617.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A1F3YRD6_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YRD6_9PROT) HSP 1 Score: 259 bits (663), Expect = 3.890e-85 Identity = 137/207 (66.18%), Postives = 160/207 (77.29%), Query Frame = 1
Query: 1 MARTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLRPA 621
MARTKSSK WLQRHV D YV+KA+A+G RSRAAFKL EIAAR+RL PG +VVDLGAAPGGWSQ+A KVGP G V+AVDLLEIAP+S VTVL GDFR+ V+ + LGG +ADVVLSD+ PN+SGI S DQA AA L +AI+FCR LKP G F+VKVFQG+ F +L MK F +V T KP ASR +SRETYL+ RGL+ A
Sbjct: 1 MARTKSSKQWLQRHVKDPYVRKARAEGYRSRAAFKLIEIAARDRLLIPGAKVVDLGAAPGGWSQVAVQKVGPGGKVIAVDLLEIAPISAVTVLVGDFRQPAVQAQLAAALGGQKADVVLSDLSPNISGIASADQARAAELVRMAIEFCRSQLKPSGAFLVKVFQGDEFSGVLREMKRVFRAVRTIKPSASRDQSRETYLLARGLKTA 207
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: UPI0019AA55ED (RlmE family RNA methyltransferase n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019AA55ED) HSP 1 Score: 252 bits (643), Expect = 4.410e-82 Identity = 135/208 (64.90%), Postives = 158/208 (75.96%), Query Frame = 1
Query: 1 MARTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLRPAQ 624
MARTKSS WLQRHV D +V+KA+++G RSRAA+KL E ARER PG RVVDLGAAPGGWSQ+AA KV P G V+AVDLLEIAP+S VT LRGD REA ++ + +GG +ADVVLSDM PN+SGI S DQA AA L ++A+DFCRE L+ EGVF+VKVFQG F LL +KG F V T KP ASR ESRETYL+ RGL+ Q
Sbjct: 1 MARTKSSNQWLQRHVKDPFVRKARSEGYRSRAAYKLIEANARERFLVPGARVVDLGAAPGGWSQVAAQKVSPGGKVIAVDLLEIAPISTVTFLRGDCREAAIQAQLAEAMGGSKADVVLSDMSPNISGIASADQARAAELVQMAMDFCRERLQKEGVFLVKVFQGGEFAGLLKELKGMFREVRTIKPAASRGESRETYLLARGLKGIQ 208
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A521YUR4_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YUR4_9PROT) HSP 1 Score: 249 bits (636), Expect = 4.040e-81 Identity = 132/201 (65.67%), Postives = 156/201 (77.61%), Query Frame = 1
Query: 13 KSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLR 615
KSSK WL+RHV D YV+KAK QG RSRAAFKL E+ +E FRPG+ VVDLGAAPGGWSQ+AAAKV P G V+A+DLL +AP+SGVTVL GDFRE EM+ L G +ADVVLSD+ PN+SGI +VDQA A LT A+DFCR+ LKPEGVF++K F GEAF++LL R+KGTF V KP ASR ES ETY++ RGLR
Sbjct: 3 KSSKQWLRRHVTDSYVRKAKEQGYRSRAAFKLLELDEKEHFFRPGMLVVDLGAAPGGWSQVAAAKVRPGGRVIAIDLLPVAPISGVTVLEGDFRE----EMLLRSLEGAKADVVLSDVSPNLSGIGNVDQARALELTLAAVDFCRKALKPEGVFLLKAFHGEAFEELLTRLKGTFRKVKVVKPSASRGESAETYMLARGLR 199
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A521V9P6_9PROT (Ribosomal RNA large subunit methyltransferase E n=4 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521V9P6_9PROT) HSP 1 Score: 247 bits (631), Expect = 2.750e-80 Identity = 134/203 (66.01%), Postives = 156/203 (76.85%), Query Frame = 1
Query: 7 RTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLR 615
RTKSS+ WLQRHV D +V++A+A G RSRAAFKL EI ARERL RPG RVVDLGAAPGGWSQ+AAA+V P G VVAVDLLEIAP+SGV VLRGDF ++ V+ + + LGG +AD+VLSD+ PN+SGI S DQA AA L AI+FCR LKP G + KVFQG F +LA +K F V TRKP ASR ESRETYL+ RGLR
Sbjct: 2 RTKSSQRWLQRHVADPFVRRARAAGYRSRAAFKLLEIDARERLLRPGARVVDLGAAPGGWSQIAAARVAPGGLVVAVDLLEIAPISGVIVLRGDFCDSGVQAAIASALGGQQADLVLSDLSPNLSGIASADQARAADLLRAAIEFCRRHLKPGGTLLAKVFQGGEFGAVLAALKAAFREVRTRKPAASRGESRETYLLARGLR 204
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A1F4B6B8_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_19 TaxID=1797491 RepID=A0A1F4B6B8_9PROT) HSP 1 Score: 247 bits (630), Expect = 4.170e-80 Identity = 133/207 (64.25%), Postives = 156/207 (75.36%), Query Frame = 1
Query: 7 RTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLRPAQA 627
R++SS+ WLQRHV D +V++A+ G RSRAAFKL EI RERL RPG RVVDLGAAPGGWSQ+AA +V P G VVAVDLLEIAP+SGVTVLRGDFR+A V+ V LGG +ADVVLSD+ PN+SGI S DQA AA L AI+FC L P G F+ KVFQGE F +LA ++ +F V TRKP ASR ESRETYL+ RGL+ A
Sbjct: 2 RSRSSQRWLQRHVTDPFVRRARESGRRSRAAFKLLEIDQRERLLRPGARVVDLGAAPGGWSQVAAERVRPGGVVVAVDLLEIAPISGVTVLRGDFRDAAVQAAVAEALGGSKADVVLSDLSPNLSGIASADQARAAELIHAAIEFCGRCLAPPGAFLAKVFQGEEFGGVLAALRASFREVRTRKPGASRDESRETYLLARGLKSPPA 208
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A1F4EZY2_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4EZY2_9PROT) HSP 1 Score: 243 bits (620), Expect = 1.020e-78 Identity = 131/200 (65.50%), Postives = 155/200 (77.50%), Query Frame = 1
Query: 13 KSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGL 612
KS K WL+RHV+D YV++AK QG RSRAAFKL EI ARE+L RPG+ VVDLGAAPGGWSQ+AAAKV P G V+A+DLL IAP+SGVTVL+GDFRE E + L G +ADVVLSD+ PN+SGI +VDQA A L AIDFCR+ LKPEGVF++K F GEAF++LLAR++ F V KP ASR ES ETY+V RGL
Sbjct: 3 KSDKQWLRRHVSDPYVRQAKKQGYRSRAAFKLLEIDAREKLLRPGMTVVDLGAAPGGWSQVAAAKVRPGGRVIAIDLLPIAPISGVTVLKGDFRE----ETLLGSLEGAKADVVLSDVSPNLSGIGNVDQARALELAGAAIDFCRKALKPEGVFLIKAFHGEAFEELLARLRAAFRKVKIVKPAASRGESAETYVVARGL 198
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A1F4EU72_9PROT (Ribosomal RNA large subunit methyltransferase E n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4EU72_9PROT) HSP 1 Score: 243 bits (619), Expect = 1.890e-78 Identity = 133/204 (65.20%), Postives = 151/204 (74.02%), Query Frame = 1
Query: 1 MARTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGL 612
M R+KSS+ WLQRHV D +V++A+ G RSRAAFKL EI RERL R G +VVDLGAAPGGWSQ+AA +V P G V+AVDLLEIAP+SGVTVLRGDF A V E V LGG +ADVVLSD+ PN+SGI S DQA AA L AI FCR LKP G F+ KVFQGE F +L +K F V TRKP ASR ESRETYL+ RGL
Sbjct: 1 MVRSKSSRRWLQRHVADPFVRRAREAGYRSRAAFKLLEIDDRERLLRQGAKVVDLGAAPGGWSQVAAERVKPGGRVIAVDLLEIAPISGVTVLRGDFCAAAVEEAVVAALGGGKADVVLSDLSPNLSGIASADQARAAVLLRGAIAFCRRQLKPGGAFLAKVFQGEEFASVLTALKAVFREVRTRKPAASRGESRETYLLARGL 204
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A537E9A6_9PROT (Ribosomal RNA large subunit methyltransferase E n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537E9A6_9PROT) HSP 1 Score: 237 bits (605), Expect = 1.820e-76 Identity = 127/200 (63.50%), Postives = 153/200 (76.50%), Query Frame = 1
Query: 13 KSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGL 612
KSSK WL+RHV D YV+KA+ QG RSR+AFKL EI +E+L RPG VVDLGAAPGGWSQ+AAA+V P G V+A+DLL+IAP++GV V+ GDFR A+ L GVRAD+VLSD+ PN+SG+ +VDQA AA L AIDFCR+ LKP+GVFVVK F GEAF ++LAR+K F V RKP ASR ES ETY+V RGL
Sbjct: 3 KSSKQWLRRHVTDPYVRKAREQGYRSRSAFKLLEIDDKEKLLRPGAIVVDLGAAPGGWSQVAAARVKPGGRVIAIDLLKIAPITGVEVVAGDFRAAR--------LEGVRADIVLSDLAPNLSGVANVDQARAAGLAFAAIDFCRKTLKPDGVFVVKTFHGEAFGEVLARLKREFRKVTVRKPSASRGESSETYVVARGL 194
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A536WT49_9PROT (Ribosomal RNA large subunit methyltransferase E n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WT49_9PROT) HSP 1 Score: 237 bits (605), Expect = 2.080e-76 Identity = 124/201 (61.69%), Postives = 155/201 (77.11%), Query Frame = 1
Query: 13 KSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLR 615
KS+K WL+RHV D YV+KA+ QG RSRAA+KL E+ RE++FRPG VVDLGAAPG WSQ+AA KV P G V+AVDLL+IAP+SGVTV++GDFR+A++ E LGG +ADV+LSD+ N+SGI +VDQA AAAL A+D CR+ LK +GVFV+K F GEAF ++L R+K F V+ RKP ASR ESRETY+V R R
Sbjct: 3 KSNKQWLRRHVTDPYVRKAREQGYRSRAAYKLIELNEREKIFRPGAMVVDLGAAPGSWSQVAAQKVSPGGKVIAVDLLDIAPISGVTVIQGDFRDAKLIE----ALGGAKADVILSDVASNLSGIANVDQARAAALAHAAMDMCRKALKGDGVFVLKAFHGEAFDEVLQRLKREFGKVSVRKPGASRGESRETYVVARSFR 199
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A6L5JX67_RHOTE (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Rhodocyclus tenuis TaxID=1066 RepID=A0A6L5JX67_RHOTE) HSP 1 Score: 236 bits (602), Expect = 6.990e-76 Identity = 122/206 (59.22%), Postives = 155/206 (75.24%), Query Frame = 1
Query: 1 MARTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLRP 618
MART++SKAW++ HVND +VQKAKA G RSRAA+KL EI R+ L RPG VVDLGAAPGGWSQ+AA ++ +G V A+DLLEI P++GV+ L+GDFRE ++ + + T L G R +VLSDM PN+SGI DQA A L ELA++F LKP+G F+VKVF G +++ + RM+ TF SV TRKPEASR S ETYL+GRGL+P
Sbjct: 1 MARTRTSKAWMREHVNDTFVQKAKADGYRSRAAYKLMEIDDRDHLIRPGDCVVDLGAAPGGWSQVAAQRMQRRGKVFALDLLEIVPLAGVSFLQGDFRETEILQQLETMLDGERVGLVLSDMAPNISGIAISDQARAMHLAELALEFAEAWLKPDGAFLVKVFHGHGYEEYVRRMRSTFLSVTTRKPEASRDRSSETYLLGRGLKP 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13617.1.1 >prot_P-wetherbeei_contig13617.1.1 ID=prot_P-wetherbeei_contig13617.1.1|Name=mRNA_P-wetherbeei_contig13617.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=215bp MARTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVback to top mRNA from alignment at P-wetherbeei_contig13617:722..1366- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13617.1.1 ID=mRNA_P-wetherbeei_contig13617.1.1|Name=mRNA_P-wetherbeei_contig13617.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=645bp|location=Sequence derived from alignment at P-wetherbeei_contig13617:722..1366- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13617:722..1366- >mRNA_P-wetherbeei_contig13617.1.1 ID=mRNA_P-wetherbeei_contig13617.1.1|Name=mRNA_P-wetherbeei_contig13617.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=645bp|location=Sequence derived from alignment at P-wetherbeei_contig13617:722..1366- (Phaeothamnion wetherbeei SAG_119_79)back to top |