mRNA_P-wetherbeei_contig13612.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13612.2.1
Unique NamemRNA_P-wetherbeei_contig13612.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13612.2.1 vs. uniprot
Match: A0A1F3Y9W0_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3Y9W0_9PROT)

HSP 1 Score: 230 bits (587), Expect = 6.220e-74
Identity = 111/164 (67.68%), Postives = 139/164 (84.76%), Query Frame = 1
Query:   82 ANGLFLVAKPELTDPNFVRTVVLVTQTEDSSTVGVIINRPTTLKLQDFPAMEGFNAGSYRDPVFLGGPVMRQALVAVFQSETPPQASAFHVLRKLYMTMHADNLKELLASEGRRYRLYAGFSGWAPRQLESEFNREGWYVMPADEDVVFRKDMKGLWEELLQKA 573
            ANGLFLVAKP L DPNF +TVVLVTQ ED+STVGVI+NRP+TL+LQ F + E F   +YRDP+F+GGPVMRQA+VAV++S+  P+A AFHVL+ +Y+TMH DN+++LLA    RYRLYAGFSGWAPRQLESEF R+GWYV+PADE  VFR + +GLW+EL+++A
Sbjct:   28 ANGLFLVAKPSLVDPNFAKTVVLVTQAEDASTVGVIVNRPSTLQLQQFLSPE-FPTQNYRDPIFVGGPVMRQAIVAVYRSDAVPEAPAFHVLKGIYLTMHPDNIRKLLADPKARYRLYAGFSGWAPRQLESEFMRDGWYVLPADEASVFRDNAEGLWDELVERA 190          
BLAST of mRNA_P-wetherbeei_contig13612.2.1 vs. uniprot
Match: A0A1F3ZAH4_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 TaxID=1797483 RepID=A0A1F3ZAH4_9PROT)

HSP 1 Score: 221 bits (563), Expect = 3.340e-70
Identity = 110/164 (67.07%), Postives = 129/164 (78.66%), Query Frame = 1
Query:   85 NGLFLVAKPELTDPNFVRTVVLVTQTEDSSTVGVIINRPTTLKLQDFPAMEGFNAGSYRDPVFLGGPVMRQALVAVFQSETPPQASAFHVLRKLYMTMHADNLKELLASEGRRYRLYAGFSGWAPRQLESEFNREGWYVMPADEDVVFRKDMKGLWEELLQKAQ 576
            NG+FLVAKP L D NF  TV+LVTQT DSSTVGVI+NRPT L L+ F   E     +YR+PVF GGPVMRQALVA+F++E PP A AFHVL+ LY+TMH DN+  LLA   R+YRLYAGFSGWAPRQLESEF REGWY++PAD+  VFR D + LW EL+Q+AQ
Sbjct:   29 NGVFLVAKPGLRDRNFSETVILVTQTADSSTVGVILNRPTNLNLRQF-LPESAALENYREPVFFGGPVMRQALVALFRAEAPPGAPAFHVLKNLYLTMHPDNILPLLADRSRQYRLYAGFSGWAPRQLESEFAREGWYILPADQQAVFRGDSQDLWRELVQRAQ 191          
BLAST of mRNA_P-wetherbeei_contig13612.2.1 vs. uniprot
Match: A0A1F4F8T5_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F8T5_9PROT)

HSP 1 Score: 216 bits (549), Expect = 6.580e-68
Identity = 116/194 (59.79%), Postives = 144/194 (74.23%), Query Frame = 1
Query:   25 VLALCGSFAAAQGPGGASTANGLFLVAKPELTDPNFVRTVVLVTQTEDSSTVGVIINRPTTLKLQDFPAMEGFNAGSYRDPVFLGGPVMRQALVAVFQSETPPQASAFHVLRKLYMTMHADNLKELLASEGRRYRLYAGFSGWAPRQLESEFNREGWYVMPADEDVVFRKDMKGLWEELLQKAQALKTR-AAPL 603
            +L L  + AAAQ    A   NGL LVAKP L DPNF +TVVLVTQT DS TVGVI+NRPT LKL      E   AG+YRD V+ GGPVMRQ +VA+F+S  PPQA AFHVL+ LY++MH  N++ LLA   RRYRLY+GFSGWAPRQLE E  R+GW+++PA E++VFRKD +G+W+EL+ KA   +T+ AAP+
Sbjct:    8 LLVLLPACAAAQQ---AEPPNGLLLVAKPGLLDPNFRQTVVLVTQTPDSQTVGVILNRPTQLKLSQL-LPENAPAGNYRDAVYFGGPVMRQVIVALFRSGKPPQAPAFHVLKGLYLSMHPGNIEPLLAGTDRRYRLYSGFSGWAPRQLEGELARDGWFLLPATEELVFRKDTRGMWKELVDKALGKRTQGAAPI 197          
BLAST of mRNA_P-wetherbeei_contig13612.2.1 vs. uniprot
Match: UPI0019B65E2B (YqgE/AlgH family protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019B65E2B)

HSP 1 Score: 214 bits (546), Expect = 2.420e-67
Identity = 106/164 (64.63%), Postives = 133/164 (81.10%), Query Frame = 1
Query:   82 ANGLFLVAKPELTDPNFVRTVVLVTQTEDSSTVGVIINRPTTLKLQDFPAMEGFNAGSYRDPVFLGGPVMRQALVAVFQSETPPQASAFHVLRKLYMTMHADNLKELLASEGRRYRLYAGFSGWAPRQLESEFNREGWYVMPADEDVVFRKDMKGLWEELLQKA 573
            ANGLFLVAKP L DPNF +TVVLVTQTED+STVGVIINRPT L L  F   +   A +YRD ++ GGPVMRQ+++A+++S T P+  AFHVLR +Y++MH DNL++LL     +YRLYAGFSGWAPRQLESEF R+GW+V+PADE  VFRK+ +GLWEEL+++A
Sbjct:   39 ANGLFLVAKPSLGDPNFAKTVVLVTQTEDASTVGVIINRPTALGLAQFVPQD-VPAQNYRDQIYFGGPVMRQSILALYRSGTAPEKPAFHVLRGVYLSMHPDNLRKLLEVGKDQYRLYAGFSGWAPRQLESEFMRDGWFVLPADEATVFRKNTEGLWEELVERA 201          
BLAST of mRNA_P-wetherbeei_contig13612.2.1 vs. uniprot
Match: A0A521V995_9PROT (Uncharacterized protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521V995_9PROT)

HSP 1 Score: 205 bits (521), Expect = 7.910e-64
Identity = 100/164 (60.98%), Postives = 127/164 (77.44%), Query Frame = 1
Query:   85 NGLFLVAKPELTDPNFVRTVVLVTQTEDSSTVGVIINRPTTLKLQDFPAMEGFNAGSYRDPVFLGGPVMRQALVAVFQSETPPQASAFHVLRKLYMTMHADNLKELLASEGRRYRLYAGFSGWAPRQLESEFNREGWYVMPADEDVVFRKDMKGLWEELLQKAQ 576
            NG+FLVAKP + DPNF  TVVLVTQ  D+STVGVIINRPT L+LQ     E   AG+YRD ++ GGPV RQA+VA+F+++TPP A AFHVL+ LY+T+H DN+  LLA   R+YRLY GFSGWAPRQLE EF  EGW+V+ A+ + VFR D + LW+EL+++A+
Sbjct:   29 NGIFLVAKPGMQDPNFSETVVLVTQAADASTVGVIINRPTALQLQQLMP-ELATAGNYRDRLYFGGPVARQAIVALFRADTPPAAPAFHVLKNLYLTLHPDNITALLADSSRQYRLYTGFSGWAPRQLEGEFALEGWHVVAAEAETVFRDDPENLWQELVRRAE 191          
BLAST of mRNA_P-wetherbeei_contig13612.2.1 vs. uniprot
Match: A0A521VHR3_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VHR3_9PROT)

HSP 1 Score: 200 bits (508), Expect = 7.180e-62
Identity = 96/164 (58.54%), Postives = 129/164 (78.66%), Query Frame = 1
Query:   85 NGLFLVAKPELTDPNFVRTVVLVTQTEDSSTVGVIINRPTTLKLQDFPAMEGFNAGSYRDPVFLGGPVMRQALVAVFQSETPPQASAFHVLRKLYMTMHADNLKELLASEGRRYRLYAGFSGWAPRQLESEFNREGWYVMPADEDVVFRKDMKGLWEELLQKAQ 576
            NG+FLVAKP + DPNF  +VVLVTQ  D+STVGVIINRPT+L L+     E  +A +YRD ++ GGPV R+A+VA+F++++PP A AFHVL+ LY+T+H DN+  LLA+  R+YRLY GFSGWAPRQLE EF  EGW+V+PAD + VFR D + +W+EL+++A+
Sbjct:   29 NGIFLVAKPGMQDPNFSESVVLVTQAADASTVGVIINRPTSLPLRQL-LPELASAANYRDRLYFGGPVARRAIVALFRADSPPAAPAFHVLKNLYLTLHPDNITALLANSNRQYRLYTGFSGWAPRQLEGEFALEGWHVVPADAETVFRDDPQHIWQELVRRAE 191          
BLAST of mRNA_P-wetherbeei_contig13612.2.1 vs. uniprot
Match: A0A1F4F2X2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4F2X2_9PROT)

HSP 1 Score: 192 bits (488), Expect = 1.090e-58
Identity = 98/180 (54.44%), Postives = 133/180 (73.89%), Query Frame = 1
Query:   49 AAAQGPGGASTANGLFLVAKPELTDPNFVRTVVLVTQTEDSSTVGVIINRPTTLKLQDFPAMEGFNAGSYRDPVFLGGPVMRQALVAVFQSETPPQASAFHVLRKLYMTMHADNLKELLASEGRRYRLYAGFSGWAPRQLESEFNREGWYVMPADEDVVFRKDMKGLWEELLQKAQALKT 588
            A AQ P   S  NGL L+AKP+L DPNF  TVVLVTQ  D STVGVI+NRPT+ + +          G   +P++ GGPVM + LVA+F+S+ PP+A AFHVL+++Y++MH DN++ LLA   RR+RL+AGFSGWAPRQLE+E  R+GWYV+ A+E++VFRK+  G+W ELL++A+  +T
Sbjct:   16 AQAQEP---SEPNGLLLIAKPDLLDPNFRETVVLVTQAPDYSTVGVILNRPTSARHE--------RTG---EPIYGGGPVMPRTLVALFRSDEPPEAPAFHVLKRVYLSMHPDNIERLLARPARRFRLFAGFSGWAPRQLEAEMRRDGWYVLAANEELVFRKETAGMWRELLERARGERT 181          
BLAST of mRNA_P-wetherbeei_contig13612.2.1 vs. uniprot
Match: A0A537BHM2_9PROT (YqgE/AlgH family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BHM2_9PROT)

HSP 1 Score: 187 bits (475), Expect = 1.420e-56
Identity = 97/170 (57.06%), Postives = 122/170 (71.76%), Query Frame = 1
Query:   85 NGLFLVAKPELTDPNFVRTVVLVTQTEDSSTVGVIINRPTTLKLQDFPAMEGFNAGSYRDPVFLGGPVMRQALVAVFQSETPPQASAFHVLRKLYMTMHADNLKELLASEGRRYRLYAGFSGWAPRQLESEFNREGWYVMPADEDVVFRKDMKGLWEELLQKA---QALK 585
            NG+ LVAKP+LTDPNF  TVVLVTQT D+ TVGVI+NRPT  KL               + VF GGPV+R+ +VA+FQS   P++ AFHVL  +Y+TM ++ ++ LLA  G+R+RLYAGFSGWAP QL++E  R+GWYV+PA  D++FRKD  GLW ELL KA   QALK
Sbjct:   61 NGVLLVAKPDLTDPNFRETVVLVTQTPDAQTVGVILNRPTERKLSG-------------ESVFFGGPVLRETIVALFQSRERPESPAFHVLPDVYLTMQSETVERLLARPGQRFRLYAGFSGWAPLQLQAELARDGWYVLPASADLLFRKDTAGLWSELLAKARGEQALK 217          
BLAST of mRNA_P-wetherbeei_contig13612.2.1 vs. uniprot
Match: A0A521YMX4_9PROT (YqgE/AlgH family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YMX4_9PROT)

HSP 1 Score: 186 bits (471), Expect = 5.070e-56
Identity = 92/165 (55.76%), Postives = 122/165 (73.94%), Query Frame = 1
Query:   82 ANGLFLVAKPELTDPNFVRTVVLVTQTEDSSTVGVIINRPTTLKLQDFPAMEGFNAGSYRDPVFLGGPVMRQALVAVFQSETPPQASAFHVLRKLYMTMHADNLKELLASEGRRYRLYAGFSGWAPRQLESEFNREGWYVMPADEDVVFRKDMKGLWEELLQKAQ 576
            ANGL L+AKP+L DPNF  TVVLVTQT D STVGVI+NRPT +K +         +G    P++ GGPV+   LV +F S++ P+A AFHVL+++Y++MH  N++ LLA   R +RL+AGFSGWAPRQLE+E   EGWYV+PA ED++FR+D  GLW ELL++A+
Sbjct:   31 ANGLLLIAKPDLRDPNFRETVVLVTQTPDYSTVGVILNRPTRVKDE--------RSGK---PIYSGGPVLPGTLVGLFHSDSAPEAPAFHVLKRVYLSMHPSNIERLLARPPRNFRLFAGFSGWAPRQLEAEIRAEGWYVLPASEDLLFREDTTGLWRELLERAR 184          
BLAST of mRNA_P-wetherbeei_contig13612.2.1 vs. uniprot
Match: A0A536PUZ9_9CHLR (YqgE/AlgH family protein n=2 Tax=Bacteria TaxID=2 RepID=A0A536PUZ9_9CHLR)

HSP 1 Score: 176 bits (445), Expect = 2.580e-52
Identity = 90/173 (52.02%), Postives = 120/173 (69.36%), Query Frame = 1
Query:   85 NGLFLVAKPELTDPNFVRTVVLVTQTEDSSTVGVIINRPTTLKLQDF-PAMEGFNAGSYRDPVFLGGPVMRQALVAVFQSETPPQASAFHVLRKLYMTMHADNLKELLASEGRRYRLYAGFSGWAPRQLESEFNREGWYVMPADEDVVFRKDMKGLWEELLQKAQALKTRAAP 600
            NG+ LVAKP L DPNF  TVVLV +T+D +TVGVI+NRPT  +L D  P+  G  A +  +P++ GGPVMRQ +VA++ +E  P+A AF VL  +Y++MH  NL+ L+A    R RLYAGFSGWAPRQLE E     WYV+ A E++VFRKD  G+W EL+++A+  +    P
Sbjct:   28 NGILLVAKPGLPDPNFSETVVLVARTDDGATVGVILNRPTVRRLVDIAPSWPG--AENLTEPLYAGGPVMRQVVVALYAAEEEPKAKAFRVLPYIYLSMHPANLEPLVAQPSERMRLYAGFSGWAPRQLEVEMASGSWYVLRATEELVFRKDTSGMWSELVERARGSRVARDP 198          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13612.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F3Y9W0_9PROT6.220e-7467.68Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1F3ZAH4_9PROT3.340e-7067.07Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1F4F8T5_9PROT6.580e-6859.79Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
UPI0019B65E2B2.420e-6764.63YqgE/AlgH family protein n=1 Tax=Candidatus Parcub... [more]
A0A521V995_9PROT7.910e-6460.98Uncharacterized protein n=2 Tax=Betaproteobacteria... [more]
A0A521VHR3_9PROT7.180e-6258.54Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1F4F2X2_9PROT1.090e-5854.44Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A537BHM2_9PROT1.420e-5657.06YqgE/AlgH family protein n=1 Tax=Betaproteobacteri... [more]
A0A521YMX4_9PROT5.070e-5655.76YqgE/AlgH family protein n=1 Tax=Betaproteobacteri... [more]
A0A536PUZ9_9CHLR2.580e-5252.02YqgE/AlgH family protein n=2 Tax=Bacteria TaxID=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13612contigP-wetherbeei_contig13612:867..1469 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1267535.KB906767_gene5521
PFAMsDUF179
Model size603
Max annot lvl57723|Acidobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.07e-23
EggNOG OGsCOG1678@1|root,COG1678@2|Bacteria,3Y8TX@57723|Acidobacteria
DescriptionUncharacterized ACR, COG1678
Cds size603
COG categoryK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185992.5408804-CDS-P-wetherbeei_contig13612:866..14691683185992.5408804-CDS-P-wetherbeei_contig13612:866..1469Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13612 867..1469 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13612.2.1prot_P-wetherbeei_contig13612.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13612 867..1469 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13612.2.1

>prot_P-wetherbeei_contig13612.2.1 ID=prot_P-wetherbeei_contig13612.2.1|Name=mRNA_P-wetherbeei_contig13612.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp
MIRLAAACVLALCGSFAAAQGPGGASTANGLFLVAKPELTDPNFVRTVVL
VTQTEDSSTVGVIINRPTTLKLQDFPAMEGFNAGSYRDPVFLGGPVMRQA
LVAVFQSETPPQASAFHVLRKLYMTMHADNLKELLASEGRRYRLYAGFSG
WAPRQLESEFNREGWYVMPADEDVVFRKDMKGLWEELLQKAQALKTRAAP
L
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mRNA from alignment at P-wetherbeei_contig13612:867..1469-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13612.2.1 ID=mRNA_P-wetherbeei_contig13612.2.1|Name=mRNA_P-wetherbeei_contig13612.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig13612:867..1469- (Phaeothamnion wetherbeei SAG_119_79)
ATGATCCGCCTCGCCGCGGCCTGCGTCCTCGCGCTTTGCGGGTCGTTTGC GGCGGCGCAGGGGCCCGGCGGCGCATCGACGGCCAACGGGCTGTTCCTGG TCGCCAAGCCCGAGCTGACCGACCCCAATTTCGTCCGCACGGTCGTCCTG GTCACGCAGACTGAGGATTCCAGCACCGTCGGCGTGATCATCAACCGGCC CACCACGCTGAAGCTGCAGGATTTCCCTGCCATGGAAGGGTTCAATGCCG GGAGCTACCGTGACCCGGTCTTCCTCGGCGGACCGGTCATGCGCCAGGCG CTGGTGGCGGTATTCCAGTCCGAGACCCCGCCCCAGGCCTCTGCCTTCCA CGTGCTGCGCAAGCTCTACATGACCATGCACGCGGACAACCTGAAGGAGT TGCTGGCCTCCGAGGGACGCCGCTACAGGCTCTACGCCGGGTTCTCAGGC TGGGCACCGCGACAGCTCGAGAGCGAATTCAACCGCGAAGGCTGGTACGT GATGCCGGCCGACGAGGACGTCGTATTCCGCAAGGACATGAAGGGCTTGT GGGAAGAACTCCTGCAAAAAGCCCAGGCCCTGAAGACCAGGGCCGCGCCC CTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13612:867..1469-

>mRNA_P-wetherbeei_contig13612.2.1 ID=mRNA_P-wetherbeei_contig13612.2.1|Name=mRNA_P-wetherbeei_contig13612.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig13612:867..1469- (Phaeothamnion wetherbeei SAG_119_79)
ATGATCCGCCTCGCCGCGGCCTGCGTCCTCGCGCTTTGCGGGTCGTTTGC
GGCGGCGCAGGGGCCCGGCGGCGCATCGACGGCCAACGGGCTGTTCCTGG
TCGCCAAGCCCGAGCTGACCGACCCCAATTTCGTCCGCACGGTCGTCCTG
GTCACGCAGACTGAGGATTCCAGCACCGTCGGCGTGATCATCAACCGGCC
CACCACGCTGAAGCTGCAGGATTTCCCTGCCATGGAAGGGTTCAATGCCG
GGAGCTACCGTGACCCGGTCTTCCTCGGCGGACCGGTCATGCGCCAGGCG
CTGGTGGCGGTATTCCAGTCCGAGACCCCGCCCCAGGCCTCTGCCTTCCA
CGTGCTGCGCAAGCTCTACATGACCATGCACGCGGACAACCTGAAGGAGT
TGCTGGCCTCCGAGGGACGCCGCTACAGGCTCTACGCCGGGTTCTCAGGC
TGGGCACCGCGACAGCTCGAGAGCGAATTCAACCGCGAAGGCTGGTACGT
GATGCCGGCCGACGAGGACGTCGTATTCCGCAAGGACATGAAGGGCTTGT
GGGAAGAACTCCTGCAAAAAGCCCAGGCCCTGAAGACCAGGGCCGCGCCC
CTG
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