mRNA_P-wetherbeei_contig10300.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10300.2.1
Unique NamemRNA_P-wetherbeei_contig10300.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10300.2.1 vs. uniprot
Match: A0A4P5UC40_9BURK (Uncharacterized protein n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4P5UC40_9BURK)

HSP 1 Score: 574 bits (1479), Expect = 1.090e-205
Identity = 266/321 (82.87%), Postives = 290/321 (90.34%), Query Frame = 1
Query:    1 MSVILGSGDHRYRVVEDWAKLPDGWEFKDAAAVAVDSKDRVYVFNRGEHPMIVFDRDGTFIKSWGEGGLFPHAHGLHIDDDDLLYLTDDGGHTVTKCTTDGKVLLQLGVPGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKYSPDGKLLLSWGEPGTDRGQFNIAHNIATDAEGWVYVADRENHRVQVFDANGRYETQWTNMHRPCGLYCCRGKKKLEFIIGELGPNMSVNRNLPNIGPRLTIVDAKGEKVARLGGEAGPGLETGKFVAPHGLAVDSRGDIYVGEVSYTEYPRLFPDNPVPWRMRSLQKLEKL 963
            M+ ILG+GDHRYRVVEDWAKLP+GWE KD AAVAVDSK RVYVFNRGEHPMIVFD DG F+ SWGEG  FP AHGLHID +D+LY TDDGGH V KCTT+GKVLL+LGVPG+ APYMSG PFHRCTHTALSP GEIYVSDGYGNARVHKYSPDG+LL+SWGEPGTD GQFNIAHNIATDAEGWVYVADRENHRVQVFD NG YETQW NMHRPCGLYCC G K  +F+IGELGP  SVNR+LPNIGPRL+IVD++G+ +ARLGGEAGPGLE GKF+APHGLAVD+RGDIYVGEVSYTEYPR+F D P+PWRMRSLQKL+KL
Sbjct:    1 MTAILGTGDHRYRVVEDWAKLPEGWELKDVAAVAVDSKSRVYVFNRGEHPMIVFDSDGNFLSSWGEG-RFPRAHGLHIDANDILYCTDDGGHFVRKCTTEGKVLLELGVPGQAAPYMSGLPFHRCTHTALSPSGEIYVSDGYGNARVHKYSPDGQLLMSWGEPGTDPGQFNIAHNIATDAEGWVYVADRENHRVQVFDGNGNYETQWVNMHRPCGLYCCGGSKP-QFLIGELGPMGSVNRDLPNIGPRLSIVDSQGKLIARLGGEAGPGLEAGKFIAPHGLAVDARGDIYVGEVSYTEYPRMFSD-PIPWRMRSLQKLQKL 318          
BLAST of mRNA_P-wetherbeei_contig10300.2.1 vs. uniprot
Match: A0A7C2QQI4_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QQI4_9HYPH)

HSP 1 Score: 541 bits (1394), Expect = 7.810e-193
Identity = 250/322 (77.64%), Postives = 276/322 (85.71%), Query Frame = 1
Query:    1 MSVILGSGDHRYRVVEDWAKLPDGWEFKDAAAVAVDSKDRVYVFNRGEHPMIVFDRDGTFIKSWGEGGLFPHAHGLHIDDDDLLYLTDDGGHTVTKCTTDGKVLLQLGVPGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKYSPDGKLLLSWGEPGTDRGQFNIAHNIATDAEGWVYVADRENHRVQVFDANGRYETQWTNMHRPCGLYCCRGKKKLEFIIGELGPNMSVNRNLPNIGPRLTIVDAKGEKVARLGGEAGPGLETGKFVAPHGLAVDSRGDIYVGEVSYTEYPRLFPDNPVPWRMRSLQKLEKLA 966
            M V+LGSG+HRYRVVE WA+LPDGWE  D AAVAVDSKD+VYVFNRGEHPMIVFDRDG F++SWGEG +F  AHGLHID DD LY TDDG HTV +C  DG+V L +G+PGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHK+SP GKL+LSWG  G+D GQFNIAHNIA D +GWVYVADRENHRVQVFD NG+YETQW N+HRPCGLYCCRGK    F+IGELGP M VN   PN+GPRL+IVDAKG  VARLGGE GPGLE GKF+APHGLA+DSRGDIYVGEVSYT +   FPD P+P  +RSLQKLEK+A
Sbjct:    1 MEVMLGSGEHRYRVVEGWARLPDGWELMDVAAVAVDSKDQVYVFNRGEHPMIVFDRDGNFLRSWGEG-VFKRAHGLHIDADDNLYCTDDGDHTVRRCRPDGRVELTIGIPGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKFSPAGKLILSWGSSGSDPGQFNIAHNIAADDDGWVYVADRENHRVQVFDGNGKYETQWNNLHRPCGLYCCRGKAPT-FMIGELGPGMRVNLKAPNLGPRLSIVDAKGRLVARLGGEDGPGLEPGKFIAPHGLAIDSRGDIYVGEVSYTNWSTSFPDRPMPRPLRSLQKLEKVA 320          
BLAST of mRNA_P-wetherbeei_contig10300.2.1 vs. uniprot
Match: A0A537S8K4_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S8K4_9PROT)

HSP 1 Score: 536 bits (1380), Expect = 1.060e-190
Identity = 244/322 (75.78%), Postives = 279/322 (86.65%), Query Frame = 1
Query:    1 MSVILGSGDHRYRVVEDWAKLPDGWEFKDAAAVAVDSKDRVYVFNRGEHPMIVFDRDGTFIKSWGEGGLFPHAHGLHIDDDDLLYLTDDGGHTVTKCTTDGKVLLQLGVPGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKYSPDGKLLLSWGEPGTDRGQFNIAHNIATDAEGWVYVADRENHRVQVFDANGRYETQWTNMHRPCGLYCCRGKKKLEFIIGELGPNMSVNRNLPNIGPRLTIVDAKGEKVARLGGEAGPGLETGKFVAPHGLAVDSRGDIYVGEVSYTEYPRLFPDNPVPWRMRSLQKLEKLA 966
            MSV+LGSG+HRYRVVE+WAKLPDGW FKD AAVAVD KD+VYVFNRGEHPM+VFDR G F++SWGEG +F  AHGLHID  D LY TDDG HTV +C+T GK+ L +GVPGKPAP+MSGEPFHRCTHTALSPKG+IYVSDGYGNARVHK+SP GKLL+SWGE GT+ GQFNIAHNIATD +GWVYVADRENHRVQVFD NG+YE QW N+HRPCGLYCCRGKK   F+IGELGP M VN   PN+GPRL+IVD +G+ +ARLGG+ GPGLE GKF+APHGLA+DS+GDIYVGEVSYT +   FPD P+P  +RSLQKLEK++
Sbjct:    1 MSVVLGSGEHRYRVVENWAKLPDGWSFKDVAAVAVDGKDQVYVFNRGEHPMMVFDRAGNFLRSWGEG-IFRRAHGLHIDAHDNLYCTDDGDHTVRRCSTAGKIELTIGVPGKPAPFMSGEPFHRCTHTALSPKGDIYVSDGYGNARVHKFSPAGKLLMSWGESGTEPGQFNIAHNIATDDDGWVYVADRENHRVQVFDGNGKYEAQWNNLHRPCGLYCCRGKKPT-FVIGELGPGMPVNLKAPNLGPRLSIVDGQGKLIARLGGKEGPGLEPGKFIAPHGLALDSKGDIYVGEVSYTNWKTSFPDKPMPSSIRSLQKLEKVS 320          
BLAST of mRNA_P-wetherbeei_contig10300.2.1 vs. uniprot
Match: A0A259MX64_9PROT (Uncharacterized protein n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MX64_9PROT)

HSP 1 Score: 532 bits (1371), Expect = 2.580e-189
Identity = 244/322 (75.78%), Postives = 275/322 (85.40%), Query Frame = 1
Query:    1 MSVILGSGDHRYRVVEDWAKLPDGWEFKDAAAVAVDSKDRVYVFNRGEHPMIVFDRDGTFIKSWGEGGLFPHAHGLHIDDDDLLYLTDDGGHTVTKCTTDGKVLLQLGVPGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKYSPDGKLLLSWGEPGTDRGQFNIAHNIATDAEGWVYVADRENHRVQVFDANGRYETQWTNMHRPCGLYCCRGKKKLEFIIGELGPNMSVNRNLPNIGPRLTIVDAKGEKVARLGGEAGPGLETGKFVAPHGLAVDSRGDIYVGEVSYTEYPRLFPDNPVPWRMRSLQKLEKLA 966
            MSV+LGSG+HRYRVVEDWAKLPDGWEF+D AAVA DSKDRVYVFNRG+HPM+VFDRDG F++SWGEG LF  AHGLHID DD L+ TDDG HTV K +TDGKVLL +GVP +PAP++SG+PF+RCTHTALSPKGEIYVSDGYGN+RVHKYSPDGK L+ WG  GTD G+FNI HNIA DA+GWVYVADRENHRVQVFD NGRYE QW NMHRPC LYCC G K   FIIGELGP M VN    N+GPRL+IVDAKG+ +ARLGG+ GPG + G+F++PHGLAVDSRGDIYVGEVSYT +P  FP  PVP  +RSLQKLEK+A
Sbjct:    1 MSVVLGSGEHRYRVVEDWAKLPDGWEFRDVAAVACDSKDRVYVFNRGDHPMMVFDRDGNFLRSWGEG-LFSRAHGLHIDSDDNLFCTDDGDHTVRKVSTDGKVLLTIGVPDQPAPFLSGKPFNRCTHTALSPKGEIYVSDGYGNSRVHKYSPDGKHLMCWGTTGTDPGEFNIPHNIAADADGWVYVADRENHRVQVFDGNGRYEAQWNNMHRPCALYCCGGAKNPTFIIGELGPGMPVNSKHTNLGPRLSIVDAKGKTLARLGGQDGPGEQAGRFLSPHGLAVDSRGDIYVGEVSYTNWPSTFPGTPVPKYLRSLQKLEKVA 321          
BLAST of mRNA_P-wetherbeei_contig10300.2.1 vs. uniprot
Match: UPI000404CCC2 (peptidyl-alpha-hydroxyglycine alpha-amidating lyase family protein n=1 Tax=Bradyrhizobium sp. Tv2a-2 TaxID=113395 RepID=UPI000404CCC2)

HSP 1 Score: 531 bits (1369), Expect = 6.030e-189
Identity = 243/325 (74.77%), Postives = 277/325 (85.23%), Query Frame = 1
Query:    1 MSVILGSGDHRYRVVEDWAKLPDGWEFKDAAAVAVDSKDRVYVFNRGEHPMIVFDRDGTFIKSWGEGGLFPHAHGLHIDDDDLLYLTDDGGHTVTKCTTDGKVLLQLGVPGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKYSPDGKLLLSWGEPGTDRGQFNIAHNIATDAEGWVYVADRENHRVQVFDANGRYETQWTNMHRPCGLYCCRGKKKLEFIIGELGPNMSVNRNLPNIGPRLTIVDAKGEKVARLGGEAGPGLETGKFVAPHGLAVDSRGDIYVGEVSYTEYPRLFPDNPVPW---RMRSLQKLEKLA 966
            M  ILGSG+HRYRVVE WAKLPDGWE  D A+VAVDSKDRVYVFNRG HPMIV DRDG F++SWGEG LF  AHGLH+D DD LY TDDG HTV KCT DGKVLL +G+P KPAP+MSGEPFHRCTHTALSPKGEIYVSDGYGNARVHK++PDG+L+ SWGEPG+D GQFNI HNIATDA+G+VYVADRENHRVQVFD NGRYETQW N+HRPC L CC G K+  F+IGELGP M+VNR +PN+GPRLT+VDA+G ++ARLGGE GPG+E GKF+APHGLA+DSRGDIYVGEV  T++   FPD P+P    R R LQKLE+++
Sbjct:    1 MPTILGSGEHRYRVVEGWAKLPDGWELTDVASVAVDSKDRVYVFNRGAHPMIVLDRDGNFLRSWGEG-LFSRAHGLHLDADDNLYCTDDGDHTVRKCTPDGKVLLTIGIPEKPAPFMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKFTPDGRLIKSWGEPGSDPGQFNIVHNIATDADGYVYVADRENHRVQVFDGNGRYETQWNNLHRPCALCCCGGGKQPTFLIGELGPGMAVNRKVPNLGPRLTLVDARGARIARLGGEKGPGIEAGKFLAPHGLALDSRGDIYVGEVGVTDWKTSFPDEPMPAEVRRARCLQKLERIS 324          
BLAST of mRNA_P-wetherbeei_contig10300.2.1 vs. uniprot
Match: A0A1B1UP75_9BRAD (Uncharacterized protein n=9 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1B1UP75_9BRAD)

HSP 1 Score: 528 bits (1361), Expect = 8.930e-188
Identity = 244/324 (75.31%), Postives = 274/324 (84.57%), Query Frame = 1
Query:    1 MSVILGSGDHRYRVVEDWAKLPDGWEFKDAAAVAVDSKDRVYVFNRGEHPMIVFDRDGTFIKSWGEGGLFPHAHGLHIDDDDLLYLTDDGGHTVTKCTTDGKVLLQLGVPGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKYSPDGKLLLSWGEPGTDRGQFNIAHNIATDAEGWVYVADRENHRVQVFDANGRYETQWTNMHRPCGLYCCRGKKKLEFIIGELGPNMSVNRNLPNIGPRLTIVDAKGEKVARLGGEAGPGLETGKFVAPHGLAVDSRGDIYVGEVSYTEYPRLFPDNPVPWRM---RSLQKLEKL 963
            M  ILGSGDHRYRVVE+WAKLPDGW   D A+VAVDSKDR+YVFNRG HPM+V DR+G FIKSWGEG LF  AHGLHID DD LY TDDG HTV KCTTDGKVLL +G+P KPAP+MSGEPFHRCTHTALSPKGEIYVSDGYGNA VHKYSPDGKLL +WGEPGTD GQFNI HNIATD +GWVYVADRENHRVQVFD NG+YE QW  +HRPC L CC GK+   FI+GELGP M+VNR +PN+GPRL+IVD+KG+++ARLGGE GPGLE GKF+APHG+A+DSRGDIY+GEV  T++   FPD P+P  +   R LQKLEKL
Sbjct:    1 MPAILGSGDHRYRVVENWAKLPDGWRLTDVASVAVDSKDRIYVFNRGAHPMVVLDREGNFIKSWGEG-LFNRAHGLHIDADDHLYCTDDGDHTVRKCTTDGKVLLTIGIPNKPAPFMSGEPFHRCTHTALSPKGEIYVSDGYGNACVHKYSPDGKLLKTWGEPGTDPGQFNIVHNIATDTDGWVYVADRENHRVQVFDGNGKYEAQWNFLHRPCALCCCGGKQPT-FIVGELGPGMAVNRKVPNLGPRLSIVDSKGKRIARLGGENGPGLEAGKFLAPHGIALDSRGDIYIGEVGVTDWKTSFPDTPMPPEVGVTRCLQKLEKL 322          
BLAST of mRNA_P-wetherbeei_contig10300.2.1 vs. uniprot
Match: A0A1B9YVY9_9BRAD (Uncharacterized protein n=7 Tax=Bradyrhizobium TaxID=374 RepID=A0A1B9YVY9_9BRAD)

HSP 1 Score: 528 bits (1359), Expect = 1.800e-187
Identity = 243/324 (75.00%), Postives = 276/324 (85.19%), Query Frame = 1
Query:    1 MSVILGSGDHRYRVVEDWAKLPDGWEFKDAAAVAVDSKDRVYVFNRGEHPMIVFDRDGTFIKSWGEGGLFPHAHGLHIDDDDLLYLTDDGGHTVTKCTTDGKVLLQLGVPGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKYSPDGKLLLSWGEPGTDRGQFNIAHNIATDAEGWVYVADRENHRVQVFDANGRYETQWTNMHRPCGLYCCRGKKKLEFIIGELGPNMSVNRNLPNIGPRLTIVDAKGEKVARLGGEAGPGLETGKFVAPHGLAVDSRGDIYVGEVSYTEYPRLFPDNPVPWRM---RSLQKLEKL 963
            MS ILGSG+HRYRVVE+WAKLPDGW   D A+VAVDS+DR+YVFNRG HPM+V DR+G FIKSWGEG LF  AHGLHID DD LY TDDG HTV KCTTDGKVLL +G+P KPAP+MSGEPFHRCTHTALSPKGEIYVSDGYGNA VHKYSPDGKLL +WGEPGTD GQFNI HNIA+DAEGWVYVADRENHRVQVFD NG+YETQW  +HRPC L CC GK+   FI+GELGP M+VNR +PN+GPRL+IVD+KG+++ARLGGE GPG E GKF+APHG+A+DSRGDIY+GEV  T++   FPD P+P  +   R LQKLEK+
Sbjct:    1 MSAILGSGEHRYRVVENWAKLPDGWSLTDVASVAVDSRDRIYVFNRGAHPMVVLDREGNFIKSWGEG-LFNRAHGLHIDADDNLYCTDDGDHTVRKCTTDGKVLLTIGIPNKPAPFMSGEPFHRCTHTALSPKGEIYVSDGYGNACVHKYSPDGKLLKTWGEPGTDPGQFNIVHNIASDAEGWVYVADRENHRVQVFDGNGKYETQWNYLHRPCALCCCGGKQPT-FIVGELGPGMAVNRKVPNLGPRLSIVDSKGKRIARLGGENGPGPEAGKFLAPHGIALDSRGDIYIGEVGVTDWKTSFPDTPMPPEVGLTRCLQKLEKI 322          
BLAST of mRNA_P-wetherbeei_contig10300.2.1 vs. uniprot
Match: UPI001FFE6E1F (peptidyl-alpha-hydroxyglycine alpha-amidating lyase family protein n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001FFE6E1F)

HSP 1 Score: 523 bits (1348), Expect = 8.530e-186
Identity = 241/324 (74.38%), Postives = 275/324 (84.88%), Query Frame = 1
Query:    1 MSVILGSGDHRYRVVEDWAKLPDGWEFKDAAAVAVDSKDRVYVFNRGEHPMIVFDRDGTFIKSWGEGGLFPHAHGLHIDDDDLLYLTDDGGHTVTKCTTDGKVLLQLGVPGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKYSPDGKLLLSWGEPGTDRGQFNIAHNIATDAEGWVYVADRENHRVQVFDANGRYETQWTNMHRPCGLYCCRGKKKLEFIIGELGPNMSVNRNLPNIGPRLTIVDAKGEKVARLGGEAGPGLETGKFVAPHGLAVDSRGDIYVGEVSYTEYPRLFPDNPVPWRMR---SLQKLEKL 963
            M  ILGSG+HRYRVVE+WAKLP GW   DAA+VAVDSKDR+YVFNRG+HPM+V DR+G FI SWGEG LF  AHGLHID DD LY TDDG HTV KCTTDGKVLL +G+P KP P+MSGEPFHRCTHTALSPKGEIYVSDGYGNA VHKYSPDGKLL +WGEPGTD GQFNI HNIATDA+GWVYVADRENHRVQVFD NG+YETQW N+HRPC L  C GK+   FIIGELGP ++VNR +PN+GPRL+IVD+KG+++ARLGGE GPGLE GKF+APHG+A+DS+GDIY+GEV  T++   FPD P+P  +R    LQKLEK+
Sbjct:    1 MPAILGSGEHRYRVVENWAKLPGGWSLTDAASVAVDSKDRIYVFNRGDHPMVVLDREGNFITSWGEG-LFNRAHGLHIDADDHLYCTDDGDHTVRKCTTDGKVLLTIGIPNKPTPFMSGEPFHRCTHTALSPKGEIYVSDGYGNACVHKYSPDGKLLKTWGEPGTDPGQFNIVHNIATDADGWVYVADRENHRVQVFDGNGKYETQWNNLHRPCALCRCGGKQS-NFIIGELGPGLAVNRKVPNLGPRLSIVDSKGKRIARLGGENGPGLEAGKFLAPHGIAMDSKGDIYIGEVGVTDWKTSFPDTPMPPEVRVSRCLQKLEKI 322          
BLAST of mRNA_P-wetherbeei_contig10300.2.1 vs. uniprot
Match: A0A1M5XG75_9BRAD (NHL repeat-containing protein n=7 Tax=Bradyrhizobium TaxID=374 RepID=A0A1M5XG75_9BRAD)

HSP 1 Score: 523 bits (1347), Expect = 1.090e-185
Identity = 239/321 (74.45%), Postives = 273/321 (85.05%), Query Frame = 1
Query:    1 MSVILGSGDHRYRVVEDWAKLPDGWEFKDAAAVAVDSKDRVYVFNRGEHPMIVFDRDGTFIKSWGEGGLFPHAHGLHIDDDDLLYLTDDGGHTVTKCTTDGKVLLQLGVPGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKYSPDGKLLLSWGEPGTDRGQFNIAHNIATDAEGWVYVADRENHRVQVFDANGRYETQWTNMHRPCGLYCCRGKKKLEFIIGELGPNMSVNRNLPNIGPRLTIVDAKGEKVARLGGEAGPGLETGKFVAPHGLAVDSRGDIYVGEVSYTEYPRLFPDNPVPWRMRSLQKLEKL 963
            M  ILGSG+HRYRVVE+WAKLP+GW   D A+VAVDSKDR+YVFNRG HPM+V DR G FI SWGEG LF  AHGLHID DD LY TDDG HTV KC+ DGKVLL +G+P KPAP+MSGEPFHRCTHTALSPKGEIYVSDGYGNA VHKY+PDGKL+ +WGEPGTD GQFNI HNIATDA+G+VYVADRENHRVQVFD NG+YE QW N+HRPC L+CC GK+   FIIGELGP M VNR +PN+GPRLTIVD +G+++ARLGGE GPGLETGKF+APHG+A+DS+GDIYVGEV  T++   FPD PVP  +R LQKLE++
Sbjct:    1 MPTILGSGEHRYRVVENWAKLPEGWNLTDVASVAVDSKDRIYVFNRGAHPMVVLDRQGNFITSWGEG-LFSRAHGLHIDADDNLYCTDDGDHTVRKCSPDGKVLLTIGIPNKPAPFMSGEPFHRCTHTALSPKGEIYVSDGYGNACVHKYTPDGKLIKTWGEPGTDPGQFNIVHNIATDADGFVYVADRENHRVQVFDGNGKYEAQWNNLHRPCALHCCGGKQP-NFIIGELGPGMPVNRKVPNLGPRLTIVDFQGKRIARLGGENGPGLETGKFLAPHGIALDSKGDIYVGEVGVTDWKTSFPDTPVPAVVRCLQKLERV 319          
BLAST of mRNA_P-wetherbeei_contig10300.2.1 vs. uniprot
Match: A0A0R3N906_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobium TaxID=374 RepID=A0A0R3N906_9BRAD)

HSP 1 Score: 523 bits (1347), Expect = 1.210e-185
Identity = 240/324 (74.07%), Postives = 276/324 (85.19%), Query Frame = 1
Query:    1 MSVILGSGDHRYRVVEDWAKLPDGWEFKDAAAVAVDSKDRVYVFNRGEHPMIVFDRDGTFIKSWGEGGLFPHAHGLHIDDDDLLYLTDDGGHTVTKCTTDGKVLLQLGVPGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKYSPDGKLLLSWGEPGTDRGQFNIAHNIATDAEGWVYVADRENHRVQVFDANGRYETQWTNMHRPCGLYCCRGKKKLEFIIGELGPNMSVNRNLPNIGPRLTIVDAKGEKVARLGGEAGPGLETGKFVAPHGLAVDSRGDIYVGEVSYTEYPRLFPDNPVPWRM---RSLQKLEKL 963
            M VILGSG+HRYRVVE+WAKLPDGW   D A+VAVDSKDR+YVFNRG HP++V DR+G FIKSWGEG LF  AHGLHID DD LY TDDG HTV KC+TDGKVLL +G+P KPAP+MSGEPFHRCTHTALSPKGEIYVSDGYGNA VHKYS DGKLL +WGEPGTD GQFNI HNIATD++GWVYVADRENHRVQVFD NG+YETQW  +HRPC L CC GK+   FI+GELGP M+VNR +PN+GPRL+IVD+KG+++ARLGGE GPGLE GKF+APHG+A+DS+GDIY+GEV  T++   FPD P+P  +   R LQKLEK+
Sbjct:    1 MPVILGSGEHRYRVVENWAKLPDGWSLTDVASVAVDSKDRIYVFNRGAHPIVVLDREGNFIKSWGEG-LFNRAHGLHIDADDNLYCTDDGDHTVRKCSTDGKVLLTIGIPNKPAPFMSGEPFHRCTHTALSPKGEIYVSDGYGNACVHKYSHDGKLLKTWGEPGTDPGQFNIVHNIATDSDGWVYVADRENHRVQVFDGNGKYETQWNYLHRPCALCCCGGKQP-NFIVGELGPGMAVNRKVPNLGPRLSIVDSKGKRIARLGGENGPGLEAGKFLAPHGIALDSKGDIYIGEVGVTDWKTSFPDTPMPPEVGVTRCLQKLEKI 322          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10300.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4P5UC40_9BURK1.090e-20582.87Uncharacterized protein n=1 Tax=Comamonadaceae bac... [more]
A0A7C2QQI4_9HYPH7.810e-19377.64Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A537S8K4_9PROT1.060e-19075.78Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A259MX64_9PROT2.580e-18975.78Uncharacterized protein n=5 Tax=Alphaproteobacteri... [more]
UPI000404CCC26.030e-18974.77peptidyl-alpha-hydroxyglycine alpha-amidating lyas... [more]
A0A1B1UP75_9BRAD8.930e-18875.31Uncharacterized protein n=9 Tax=Alphaproteobacteri... [more]
A0A1B9YVY9_9BRAD1.800e-18775.00Uncharacterized protein n=7 Tax=Bradyrhizobium Tax... [more]
UPI001FFE6E1F8.530e-18674.38peptidyl-alpha-hydroxyglycine alpha-amidating lyas... [more]
A0A1M5XG75_9BRAD1.090e-18574.45NHL repeat-containing protein n=7 Tax=Bradyrhizobi... [more]
A0A0R3N906_9BRAD1.210e-18574.07Uncharacterized protein n=2 Tax=Bradyrhizobium Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10300contigP-wetherbeei_contig10300:366..1334 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1038859.AXAU01000005_gene5247
Preferred nameMA20_20600
PFAMsNHL
Model size969
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.18e-190
EggNOG OGsCOG3391@1|root,COG3391@2|Bacteria,1NT97@1224|Proteobacteria,2TWGD@28211|Alphaproteobacteria,3JQU4@41294|Bradyrhizobiaceae
DescriptionNHL repeat
Cds size969
COG categoryP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185862.6681287-CDS-P-wetherbeei_contig10300:365..13341683185862.6681287-CDS-P-wetherbeei_contig10300:365..1334Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10300 366..1334 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10300.2.1prot_P-wetherbeei_contig10300.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10300 366..1334 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10300.2.1

>prot_P-wetherbeei_contig10300.2.1 ID=prot_P-wetherbeei_contig10300.2.1|Name=mRNA_P-wetherbeei_contig10300.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=323bp
MSVILGSGDHRYRVVEDWAKLPDGWEFKDAAAVAVDSKDRVYVFNRGEHP
MIVFDRDGTFIKSWGEGGLFPHAHGLHIDDDDLLYLTDDGGHTVTKCTTD
GKVLLQLGVPGKPAPYMSGEPFHRCTHTALSPKGEIYVSDGYGNARVHKY
SPDGKLLLSWGEPGTDRGQFNIAHNIATDAEGWVYVADRENHRVQVFDAN
GRYETQWTNMHRPCGLYCCRGKKKLEFIIGELGPNMSVNRNLPNIGPRLT
IVDAKGEKVARLGGEAGPGLETGKFVAPHGLAVDSRGDIYVGEVSYTEYP
RLFPDNPVPWRMRSLQKLEKLA*
back to top

mRNA from alignment at P-wetherbeei_contig10300:366..1334+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10300.2.1 ID=mRNA_P-wetherbeei_contig10300.2.1|Name=mRNA_P-wetherbeei_contig10300.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig10300:366..1334+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGGTCATTCTTGGCAGCGGCGATCACCGCTACAGGGTCGTCGAGGA CTGGGCGAAGCTCCCGGACGGCTGGGAGTTCAAGGACGCCGCCGCGGTGG CCGTGGACAGCAAGGACCGGGTCTACGTCTTCAACCGCGGCGAGCACCCG ATGATCGTGTTCGACCGGGACGGCACCTTCATCAAGTCCTGGGGCGAAGG CGGGCTCTTTCCCCACGCGCACGGCCTGCACATCGACGATGACGACCTCC TCTACCTGACCGACGACGGCGGCCACACGGTGACCAAGTGCACGACCGAC GGCAAGGTGCTGCTGCAGCTCGGCGTCCCCGGCAAGCCCGCGCCCTACAT GAGCGGCGAGCCCTTCCACCGCTGCACGCACACCGCGCTCTCGCCCAAGG GCGAGATCTACGTGAGCGACGGCTACGGCAACGCCCGGGTGCACAAGTAC TCGCCCGACGGGAAGCTACTCTTGTCGTGGGGCGAGCCCGGCACCGACCG CGGCCAGTTCAACATCGCGCACAACATCGCCACCGACGCCGAAGGCTGGG TCTACGTCGCCGACCGCGAGAACCACCGCGTGCAGGTATTCGACGCCAAC GGCAGGTACGAGACGCAGTGGACCAACATGCACCGGCCCTGCGGCCTGTA CTGCTGCCGCGGGAAGAAGAAGCTCGAATTCATCATCGGCGAGCTGGGCC CCAACATGAGCGTGAACCGCAACCTGCCCAACATCGGGCCGCGCCTGACC ATCGTCGACGCGAAGGGCGAGAAGGTCGCGCGCCTCGGCGGCGAGGCCGG GCCGGGGCTGGAAACCGGCAAGTTCGTCGCGCCGCACGGCCTCGCGGTCG ATTCTCGCGGCGACATCTACGTGGGCGAGGTCAGCTACACCGAGTACCCG CGCCTCTTCCCGGACAACCCCGTCCCGTGGCGCATGCGCTCGCTGCAGAA GCTCGAAAAACTCGCCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig10300:366..1334+

>mRNA_P-wetherbeei_contig10300.2.1 ID=mRNA_P-wetherbeei_contig10300.2.1|Name=mRNA_P-wetherbeei_contig10300.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=969bp|location=Sequence derived from alignment at P-wetherbeei_contig10300:366..1334+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGGTCATTCTTGGCAGCGGCGATCACCGCTACAGGGTCGTCGAGGA
CTGGGCGAAGCTCCCGGACGGCTGGGAGTTCAAGGACGCCGCCGCGGTGG
CCGTGGACAGCAAGGACCGGGTCTACGTCTTCAACCGCGGCGAGCACCCG
ATGATCGTGTTCGACCGGGACGGCACCTTCATCAAGTCCTGGGGCGAAGG
CGGGCTCTTTCCCCACGCGCACGGCCTGCACATCGACGATGACGACCTCC
TCTACCTGACCGACGACGGCGGCCACACGGTGACCAAGTGCACGACCGAC
GGCAAGGTGCTGCTGCAGCTCGGCGTCCCCGGCAAGCCCGCGCCCTACAT
GAGCGGCGAGCCCTTCCACCGCTGCACGCACACCGCGCTCTCGCCCAAGG
GCGAGATCTACGTGAGCGACGGCTACGGCAACGCCCGGGTGCACAAGTAC
TCGCCCGACGGGAAGCTACTCTTGTCGTGGGGCGAGCCCGGCACCGACCG
CGGCCAGTTCAACATCGCGCACAACATCGCCACCGACGCCGAAGGCTGGG
TCTACGTCGCCGACCGCGAGAACCACCGCGTGCAGGTATTCGACGCCAAC
GGCAGGTACGAGACGCAGTGGACCAACATGCACCGGCCCTGCGGCCTGTA
CTGCTGCCGCGGGAAGAAGAAGCTCGAATTCATCATCGGCGAGCTGGGCC
CCAACATGAGCGTGAACCGCAACCTGCCCAACATCGGGCCGCGCCTGACC
ATCGTCGACGCGAAGGGCGAGAAGGTCGCGCGCCTCGGCGGCGAGGCCGG
GCCGGGGCTGGAAACCGGCAAGTTCGTCGCGCCGCACGGCCTCGCGGTCG
ATTCTCGCGGCGACATCTACGTGGGCGAGGTCAGCTACACCGAGTACCCG
CGCCTCTTCCCGGACAACCCCGTCCCGTGGCGCATGCGCTCGCTGCAGAA
GCTCGAAAAACTCGCCTGA
back to top